prot_C-linearis_contig84.16116.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig84.16116.1
Unique Name	prot_C-linearis_contig84.16116.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	85

Homology

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BLAST of mRNA_C-linearis_contig84.16116.1 vs. uniprot
Match: A0A6H5JNY5_9PHAE (Molybdopterin synthase sulfur carrier subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY5_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 7.800e-48
Identity = 77/84 (91.67%), Postives = 81/84 (96.43%), Query Frame = 0

Query:    1 MKVKVLFFASCREMAGTKETSLELPGDRSSVAKLREQIVVKLPGLEPVAATVTLALNQEYLDPEQDAPLKDGDEVAFIPPISGG 84
            MKVKVLFFASCREMAGTKETSLELPGD SS+A+LRE IV KLPGL+PVAATVTLALNQEYLDPEQDAPLK+GDEVAFIPPISGG
Sbjct:    1 MKVKVLFFASCREMAGTKETSLELPGDSSSIAQLREHIVKKLPGLQPVAATVTLALNQEYLDPEQDAPLKEGDEVAFIPPISGG 84

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BLAST of mRNA_C-linearis_contig84.16116.1 vs. uniprot
Match: D8LMR2_ECTSI (Molybdopterin synthase sulfur carrier subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMR2_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 5.960e-45
Identity = 74/83 (89.16%), Postives = 79/83 (95.18%), Query Frame = 0

Query:    2 KVKVLFFASCREMAGTKETSLELPGDRSSVAKLREQIVVKLPGLEPVAATVTLALNQEYLDPEQDAPLKDGDEVAFIPPISGG 84
            +VKVLFFASCREMAGTKETSLELPGD SS+A+LRE IV KLPGL+PVAATVTLALNQEYLDPEQDA LK+GDEVAFIPPISGG
Sbjct:   24 QVKVLFFASCREMAGTKETSLELPGDSSSIAQLREHIVEKLPGLQPVAATVTLALNQEYLDPEQDATLKEGDEVAFIPPISGG 106

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BLAST of mRNA_C-linearis_contig84.16116.1 vs. uniprot
Match: A0A835YXW6_9STRA (Molybdopterin synthase sulfur carrier subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXW6_9STRA)

HSP 1 Score: 110 bits (274), Expect = 7.750e-30
Identity = 55/84 (65.48%), Postives = 65/84 (77.38%), Query Frame = 0

Query:    1 MKVKVLFFASCREMAGTKETSLELPGDRSSVAKLREQIVVKLPGLEPVAATVTLALNQEYLDPEQDAPLKDGDEVAFIPPISGG 84
            MKVKVLFFASCRE+AGTKE ++ L G  +S   LR+++V  LP LEPVA  +TLA+N EY DP Q+  LKDGDEVA IPPISGG
Sbjct:    1 MKVKVLFFASCRELAGTKEIAVTLEGAENSTEALRKKLVELLPALEPVAWGITLAVNHEYTDPGQNVQLKDGDEVALIPPISGG 84

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BLAST of mRNA_C-linearis_contig84.16116.1 vs. uniprot
Match: A0A150H0I6_GONPE (Molybdopterin synthase sulfur carrier subunit n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150H0I6_GONPE)

HSP 1 Score: 85.1 bits (209), Expect = 5.990e-20
Identity = 45/84 (53.57%), Postives = 54/84 (64.29%), Query Frame = 0

Query:    1 MKVKVLFFASCREMAGTKETSLELPGDRSSVAKLREQIVVKLPGLEPVAATVTLALNQEYLDPEQDAPLKDGDEVAFIPPISGG 84
            M++KVL+FA  RE+AG  E +  LP D +  A L + I+   P LE V  T   ALNQEYL PE    LKDGDEVA IPP+SGG
Sbjct:    1 MQIKVLYFAKSREVAGIAEQAFNLP-DGADTADLLQHIISSHPALESVMKTCVFALNQEYLRPEDKEALKDGDEVAVIPPLSGG 83

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BLAST of mRNA_C-linearis_contig84.16116.1 vs. uniprot
Match: MOC2A_CHLRE (Molybdopterin synthase sulfur carrier subunit n=3 Tax=Chlamydomonas TaxID=3052 RepID=MOC2A_CHLRE)

HSP 1 Score: 83.2 bits (204), Expect = 3.450e-19
Identity = 43/84 (51.19%), Postives = 54/84 (64.29%), Query Frame = 0

Query:    1 MKVKVLFFASCREMAGTKETSLELPGDRSSVAKLREQIVVKLPGLEPVAATVTLALNQEYLDPEQDAPLKDGDEVAFIPPISGG 84
            M++KVL+FA  RE+AG  E + EL GD +    L  QI+   P L+ V  T   ALNQEY+ P+    LKDGDEVA IPP+SGG
Sbjct:    1 MQIKVLYFAKSREVAGVNEQTFEL-GDGAHTEDLLAQIIAAHPALDSVMKTCVFALNQEYVRPQDKEALKDGDEVAIIPPLSGG 83

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BLAST of mRNA_C-linearis_contig84.16116.1 vs. uniprot
Match: A0A2P6TZ70_CHLSO (Molybdopterin synthase sulfur carrier subunit n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TZ70_CHLSO)

HSP 1 Score: 83.2 bits (204), Expect = 3.450e-19
Identity = 45/85 (52.94%), Postives = 59/85 (69.41%), Query Frame = 0

Query:    1 MKVKVLFFASCREMAGTKETSLEL-PGDRSSVAKLREQIVVKLPGLEPVAATVTLALNQEYLDPEQDAPLKDGDEVAFIPPISGG 84
            M V+VLFFA  RE+AGT E S+ L PG  ++V  L +Q++ K P L+ +  +   +LNQEYL P ++ PLK GDEVA IPPISGG
Sbjct:    1 MDVRVLFFARSRELAGTSEASVTLEPGSTTTV--LLQQLLQKYPQLQELQGSFVFSLNQEYLAPGEEQPLKGGDEVAVIPPISGG 83

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BLAST of mRNA_C-linearis_contig84.16116.1 vs. uniprot
Match: I0Z8E1_COCSC (Molybdopterin synthase sulfur carrier subunit n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z8E1_COCSC)

HSP 1 Score: 82.8 bits (203), Expect = 4.900e-19
Identity = 43/84 (51.19%), Postives = 53/84 (63.10%), Query Frame = 0

Query:    1 MKVKVLFFASCREMAGTKETSLELPGDRSSVAKLREQIVVKLPGLEPVAATVTLALNQEYLDPEQDAPLKDGDEVAFIPPISGG 84
            MK+  LFFA  RE+AGT    +EL  D +S     + ++ K PGL  +     LALNQEY+D +   PLKDGDEVA IPPISGG
Sbjct:    1 MKISFLFFARSRELAGTDTYDVEL-ADGASTQDALQAVLKKFPGLSEIEGRCVLALNQEYVDSDSVKPLKDGDEVALIPPISGG 83

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BLAST of mRNA_C-linearis_contig84.16116.1 vs. uniprot
Match: A0A7J7QQ03_9CHLO (Molybdopterin synthase sulfur carrier subunit n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QQ03_9CHLO)

HSP 1 Score: 82.4 bits (202), Expect = 6.950e-19
Identity = 42/84 (50.00%), Postives = 54/84 (64.29%), Query Frame = 0

Query:    1 MKVKVLFFASCREMAGTKETSLELPGDRSSVAKLREQIVVKLPGLEPVAATVTLALNQEYLDPEQDAPLKDGDEVAFIPPISGG 84
            MKV VL+FA  RE+ G  +  LE+  D S+  KL EQ++   PGL+ V      A+NQEY+ P Q   LKDGDE+A IPP+SGG
Sbjct:    1 MKVNVLYFAISREVVGKSQEELEVE-DGSTTHKLLEQLLASYPGLQSVMKACVFAVNQEYVPPSQALTLKDGDEIAIIPPLSGG 83

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BLAST of mRNA_C-linearis_contig84.16116.1 vs. uniprot
Match: L8H968_ACACA (Molybdopterin synthase sulfur carrier subunit n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H968_ACACA)

HSP 1 Score: 80.9 bits (198), Expect = 2.820e-18
Identity = 40/84 (47.62%), Postives = 54/84 (64.29%), Query Frame = 0

Query:    1 MKVKVLFFASCREMAGTKETSLELPGDRSSVAKLREQIVVKLPGLEPVAATVTLALNQEYLDPEQDAPLKDGDEVAFIPPISGG 84
            M+VK LFFA+ R++ G +E  L    D +    L   ++ + PGL P+  +  LA+NQEY+DPE    LKDGDE+A IPPISGG
Sbjct:    1 MRVKCLFFAASRDVTGVQEKELTY-ADGTKTDALIANLIEQFPGLGPIFQSAVLAVNQEYIDPESPIELKDGDEIAVIPPISGG 83

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BLAST of mRNA_C-linearis_contig84.16116.1 vs. uniprot
Match: A0A8J9WLI6_9CHLO (Probable molybdopterin synthase sulfur carrier subunit n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WLI6_9CHLO)

HSP 1 Score: 80.5 bits (197), Expect = 4.010e-18
Identity = 41/84 (48.81%), Postives = 55/84 (65.48%), Query Frame = 0

Query:    1 MKVKVLFFASCREMAGTKETSLELPGDRSSVAKLREQIVVKLPGLEPVAATVTLALNQEYLDPEQDAPLKDGDEVAFIPPISGG 84
            MKV  LFFA  RE+AGT+   L++  D +S+    + ++ + PGL+ +     LALNQEY+D     PL+DGDEVA IPPISGG
Sbjct:    1 MKVAFLFFARSRELAGTQSWELKVH-DGASIQDALQAVLTQFPGLKEIEGRCVLALNQEYVDKGSKQPLRDGDEVALIPPISGG 83

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig84.16116.1 vs. uniprot

BLAST of mRNA_C-linearis_contig84.16116.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JNY5_9PHAE	7.800e-48	91.67	Molybdopterin synthase sulfur carrier subunit n=1 ...	[more]
D8LMR2_ECTSI	5.960e-45	89.16	Molybdopterin synthase sulfur carrier subunit n=1 ...	[more]
A0A835YXW6_9STRA	7.750e-30	65.48	Molybdopterin synthase sulfur carrier subunit n=1 ...	[more]
A0A150H0I6_GONPE	5.990e-20	53.57	Molybdopterin synthase sulfur carrier subunit n=1 ...	[more]
MOC2A_CHLRE	3.450e-19	51.19	Molybdopterin synthase sulfur carrier subunit n=3 ...	[more]
A0A2P6TZ70_CHLSO	3.450e-19	52.94	Molybdopterin synthase sulfur carrier subunit n=1 ...	[more]
I0Z8E1_COCSC	4.900e-19	51.19	Molybdopterin synthase sulfur carrier subunit n=1 ...	[more]
A0A7J7QQ03_9CHLO	6.950e-19	50.00	Molybdopterin synthase sulfur carrier subunit n=1 ...	[more]
L8H968_ACACA	2.820e-18	47.62	Molybdopterin synthase sulfur carrier subunit n=1 ...	[more]
A0A8J9WLI6_9CHLO	4.010e-18	48.81	Probable molybdopterin synthase sulfur carrier sub...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 2..84 e-value: 6.5E-25 score: 89.6
None	No IPR available	TIGRFAM	TIGR01682	TIGR01682	coord: 3..84 e-value: 4.4E-23 score: 79.9
None	No IPR available	PANTHER	PTHR33359	FAMILY NOT NAMED	coord: 1..84
IPR003749	Sulfur carrier ThiS/MoaD-like	PFAM	PF02597	ThiS	coord: 5..84 e-value: 1.1E-17 score: 64.5
IPR028887	Molybdopterin synthase sulfur carrier subunit	HAMAP	MF_03051	MOCS2A	coord: 2..84 score: 24.385
IPR016155	Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp	SUPERFAMILY	54285	MoaD/ThiS	coord: 1..82

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig84	contig	C-linearis_contig84:561614..562810 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig84.16116.1	mRNA_C-linearis_contig84.16116.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig84 561541..564328 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig84.16116.1 ID=prot_C-linearis_contig84.16116.1|Name=mRNA_C-linearis_contig84.16116.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=85bp
MKVKVLFFASCREMAGTKETSLELPGDRSSVAKLREQIVVKLPGLEPVAA
TVTLALNQEYLDPEQDAPLKDGDEVAFIPPISGG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012675	Beta-grasp_dom_sf
IPR003749	ThiS/MoaD-like
IPR028887	MOCS2A
IPR016155	Mopterin_synth/thiamin_S_b