prot_C-linearis_contig84.16112.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig84.16112.1
Unique Nameprot_C-linearis_contig84.16112.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length452
Homology
[Close]
BLAST of mRNA_C-linearis_contig84.16112.1 vs. uniprot
Match: D8LPV5_ECTSI (Disulfide-isomerase A6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV5_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 5.570e-31
Identity = 73/102 (71.57%), Postives = 81/102 (79.41%), Query Frame = 0 
Query:  350 QSRRSAGLSTTGPRTPRARQEPPEPAAARLASMMSRLPGVHGIGLSDAPGSAAMGAVVALVDPAKAEGVLRAIRARGMVATGVAWGGFTTKAGGGSGIVRAV 451
            Q  RSAGLS TG R    RQ+PPEPAA RLASMMS LPGVHG G+S+   S AMGAVVA+VDPA+AEG+LRAI+ RG VATGVAWGG  T AGGGSG+VR V
Sbjct:  127 QGPRSAGLSATGSRV---RQKPPEPAALRLASMMSLLPGVHGSGISEGSESGAMGAVVAVVDPARAEGILRAIKTRGKVATGVAWGGMVTTAGGGSGVVRLV 225
[Close]
BLAST of mRNA_C-linearis_contig84.16112.1 vs. uniprot
Match: A0A6H5KU66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU66_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 2.270e-24
Identity = 71/136 (52.21%), Postives = 86/136 (63.24%), Query Frame = 0 
Query:    1 MASATFIEEVMGMKGFPRMKAMRCFSASLRCGKAPAASKDKAAXXXXXXXXXXXXXXXXXXXXXXXSSLKQIAAVPSTAPFALEE-VLRPQGSVVDAAAGAGTSESPGGMRLEDLLAIAGDDPPGVLLVDSKWRTC 135
            MASATF+EEVMGM GFPRMKAMRCFSASLRCG+   A+ D  A                       S   +  +    APF++++ V+R QG+ +D AA A  +ESPGGMR EDLLAIAG+DP G  LVD+KWRTC
Sbjct:  587 MASATFLEEVMGMGGFPRMKAMRCFSASLRCGRPRDAAGDYLAPSIVCARSNSSSSSSSKG-----SCRGKRTSARDPAPFSVDDGVVRLQGTRLDGAAAA-VAESPGGMRFEDLLAIAGNDPSGARLVDTKWRTC 716
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig84.16112.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LPV5_ECTSI5.570e-3171.57Disulfide-isomerase A6 n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KU66_9PHAE2.270e-2452.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036554GHMP kinase, C-terminal domain superfamilyGENE3D3.30.70.890coord: 307..434
e-value: 9.6E-9
score: 37.2
IPR036554GHMP kinase, C-terminal domain superfamilySUPERFAMILY55060GHMP Kinase, C-terminal domaincoord: 311..445

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig84contigC-linearis_contig84:475734..480289 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig84.16112.1mRNA_C-linearis_contig84.16112.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig84 475690..481508 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig84.16112.1 ID=prot_C-linearis_contig84.16112.1|Name=mRNA_C-linearis_contig84.16112.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=452bp
MASATFIEEVMGMKGFPRMKAMRCFSASLRCGKAPAASKDKAAGGGGSNL
VEVGGSGSSSSSSSSGSSLKQIAAVPSTAPFALEEVLRPQGSVVDAAAGA
GTSESPGGMRLEDLLAIAGDDPPGVLLVDSKWRTCCHLPMLGPHGVELAI
VVAQPLSLETARRLQSQAEQERARGSATCRAVVALARERHPDAHFLRDIP
PETLDALISVSTGRGQQKQRAAGAAAAAAAAAASGNGEGPPPATAAEGVP
LDQSAGGGAATGWSSPMLGMTPSTSSSSLSAAASQGRAFLSEGSVAGGGS
GGVGGFDGRRLSPEVLAHARHLAADAQRVAEVSIALATGDMETVGRLMMQ
SRRSAGLSTTGPRTPRARQEPPEPAAARLASMMSRLPGVHGIGLSDAPGS
AAMGAVVALVDPAKAEGVLRAIRARGMVATGVAWGGFTTKAGGGSGIVRA
V*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036554GHMP_kinase_C_sf