prot_C-linearis_contig84.16100.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig84.16100.1
Unique Nameprot_C-linearis_contig84.16100.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length835
Homology
BLAST of mRNA_C-linearis_contig84.16100.1 vs. uniprot
Match: D8LMX6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMX6_ECTSI)

HSP 1 Score: 592 bits (1526), Expect = 3.640e-197
Identity = 414/863 (47.97%), Postives = 495/863 (57.36%), Query Frame = 0
Query:    3 SRNDSAKRAASLALAATRSNIERTIAPPTLEQARVMGVESAVEGVDWKLSTQQLQAFRASGLHLLGRKELSMGRDGHRRILVAELSAVVRAVPVDSENAMRPLRRCCQALNDERALDALQTTCLEHANQVSRGIAKIGAAAAESMAAFRDESRGSGSSGGSLEEQKPRRGVEEDGTAHAGELFPQVPSSLPTTSTTGLADLQYGCSAASAGGKCHHR--GVPVVFSQDFTHAELNALLGPTLSWKNPFEENRKTVGGLEA-SWTACRDSLCGRLRATVPEAGVCGEGADGGRPPGEREGVISPGGACGSRAVVAEKLEAVPGSTDGSRGKAAA----PQPRQCVEEEGLAASADDERQVSPRVPVAAGDAAKTGHPAGLAAAAGDGETRGRAAQALPLVRRREAGGKLEEDAGEGVWFDKAILRVGARVPWGRLHRGRFAKVLFTVSLGKAGNGLEFAATSISPTADSMLRGIWDLRATDRDLARYLSSGYA-TVHGADCR-VRPHAYDPRRCAAELQERGELEWACAVIARTAFRLVLVVPGGVVLSLAGVAIVGGREVAWPQDIEEDRMLYKASADIQRAWRGCTGRKRARWLRMEREGXXXXXXXXXXXXXXXXXXXLLEEEAREKLALEEERRTRAQIVLAXXXXXXXXXXXXXXXXXXXXXXXXXXDXXXXXXXXXXXXXXXARSSLSRGDEESGEAHETAASGSRVDDHH--GGSAT---PGVVRLERVVTIDGTEVHLTAHVRQVA-------VNGGGGENDQPKEMLLVAVDKKARRSSSLSLDAADIGEIVGAHQGGGKDGGSVKKG----------GAQGALAAVLQKLTLFNSRRKDLFILSYRGKKVVAPH 834
            SR DSAK AAS ALAAT  +IE+T A P+ EQA VMGVES VEGV+W LST+QLQAFRASG HLL RK +S+GRD H+R  VAELSA+VR V +D+  +    R      +D  +LD  +TT  + AN    G + + AA A +          SGSS  +LEE + R  V            P+ P  LP  ++ G A L  GC+AAS  G+C+H+    P VF+ D TH+E++AL+GP+L+WK+PF+E   TV  LEA SW AC  SLC RLRAT        EG   GRPP     V+            +  ++ + G +D S   +A     PQ R   EE  L  +     Q SP VP  A        P      + D     +A QALPL+RR+ A  K  ED     W DK IL+VGARVPWGRL+RGRFAK+LFTVSLGK   GL+F ATS SP AD MLRG W+ +ATDRDLARYLS G    V G   R VR  +YDP+RCAAEL ERGEL WACA IAR AFRLV+VVPGGVVLSLAG A  GGREVAWPQD+EEDR L KAS ++QR WRGC  RKR RWLR+EREG                   L   EA+ KL LEEERR RAQ+VLA                          D                R    + +  +  A +   SG    D    G SAT   PG+ RLE VVTIDGTEVHLTAHV++V          GGG ++++P EMLLVAVDKK+RRSS LSL A DI EIV +H                       G QGAL AV++KLT+FNSRRKDLFILSY+GKKV APH
Sbjct:   10 SRGDSAKHAASQALAATSRSIEKTAASPSPEQAHVMGVESVVEGVEWNLSTEQLQAFRASGSHLLRRKYVSIGRDEHQRFFVAELSAIVRVVSLDTGGSAEGARTA-SGRSDTPSLDFQRTTS-DPANGCEGGSSHVDAATAMNGCTLTSIEARSGSSS-ALEESEHRVHV------------PRAPPPLPDIAS-GRAHLDPGCTAASTDGRCYHQRPAAPAVFALDLTHSEVDALVGPSLAWKDPFKEGSDTVRDLEATSWAACLASLCRRLRATAKAVDAGREGTLDGRPP-----VVGKQAFASDNTARSTGVDPLVGPSDPSDDPSALNEERPQQRSLREE--LPVNTAIGGQGSP-VPTTAKKIFSAVSPWDGDTVSLDESQNRQAVQALPLLRRKPARRKTGEDL---FWLDKTILKVGARVPWGRLYRGRFAKMLFTVSLGKGCRGLDFVATSNSPMADPMLRGCWECQATDRDLARYLSPGRCGAVEGETRRRVRRDSYDPQRCAAELHERGELVWACAEIARKAFRLVMVVPGGVVLSLAGAATAGGREVAWPQDVEEDRALIKASIELQRWWRGCISRKRTRWLRIEREGMRRLSRLREQAVAEKKKAEL---EAKAKLLLEEERRNRAQVVLATAARVRLARKEVSRRRAEQAAPQCEVDRDVAAEREEAANSIPPR----QVELPATTADDVVVSGGIASDDPEVGISATDTAPGLARLETVVTIDGTEVHLTAHVKEVVGTDAARGSGGGGKDSNKPLEMLLVAVDKKSRRSSRLSLKAPDITEIVASHXXXXXXXXXXXXXXXXXXVRTSTGVQGALRAVVKKLTVFNSRRKDLFILSYKGKKVTAPH 838          
BLAST of mRNA_C-linearis_contig84.16100.1 vs. uniprot
Match: A0A6H5K332_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K332_9PHAE)

HSP 1 Score: 592 bits (1526), Expect = 1.970e-196
Identity = 413/876 (47.15%), Postives = 496/876 (56.62%), Query Frame = 0
Query:    6 DSAKRAASLALAATRSNIERTIAPPTLEQARVMGVESAVEGVDWKLSTQQLQAFRASGLHLLGRKELSMGRDGHRRILVAELSAVVRAVPVDSENAMRPLRRCCQALNDERALDALQTTCLEHANQVSRGIAKIGAAAA-ESMAAFRDESRGSGSSGGSLEEQKPRRGVEEDGTAHAGELFPQVPSSLPTTSTTGLADLQYGCSAASAGGKCHHR--GVPVVFSQDFTHAELNALLGPTLSWKNPFE---------------------------ENRKTVGGLEA-SWTACRDSLCGRLRATVPEAGVCGEGADGGRPPGEREGVISPGGACGSRAVVAEKLEAVPGSTDGSRGKAAAPQ--PRQCVEEEGLAASADDERQVSPRVPVAAGDAAKTGHPAGLAAAAGDGETRGRAAQALPLVRRREAGGKLEEDAGEGVWFDKAILRVGARVPWGRLHRGRFAKVLFTVSLGKAGNGLEFAATSISPTADSMLRGIWDLRATDRDLARYLSSGYA-TVHGADCR-VRPHAYDPRRCAAELQERGELEWACAVIARTAFRLVLVVPGGVVLSLAGVAIVGGREVAWPQDIEEDRMLYKASADIQRAWRGCTGRKRARWLRMEREGXXXXXXXXXXXXXXXXXXXLLEEEAREKLALEEERRTRAQIVLAXXXXXXXXXXXXXXXXXXXXXXXXXXDXXXXXXXXXXXXXXXARSSLSRGDEESGEAHETAASGSRVDDHH--GGSAT---PGVVRLERVVTIDGTEVHLTAHVRQV----AVNG---GGGENDQPKEMLLVAVDKKARRSSSLSLDAADIGEIVGAHQGGGKDGGSVKKGGAQGALAAVLQKLTLFNSRRKDLFILSYRGKKVVAPH 834
            DS K AA+ ALAAT  +IE+T+A PT EQA VMGVES VEGV+W LST+QLQAFRASG HLL RK +S+GRD H+R+ VAELSA+VR   +D+  +    R     + D   LD  Q T  + AN+     + + AA A +       E+R    SG +LEE + R  V            P+ P  LP  ++ G A L  GC+AAS  G+C+H+    P V++ D TH+E++AL+GP+L+WK+PF+                           E   TV  LEA SWTAC DSLC RLRAT        EGA  GRPP     V+            +  ++   G +D S   +A  +  P+Q    E L      E Q  P VP  A        P      + D     +A QALPL+RRR A  K  ED     W DK IL+VGARVPWGRLHRGRFAK+LFTVSLGK   GL+F ATS SPTAD MLRG W+ +ATDRDLARYLS G    V G   R VR  +YDP+RCAAEL ERGEL WACA IAR AFRLV+VVPGGVVLSLAG  I GGREVAWPQD+EEDR L KAS ++QR WRGC  RKR RWLRMEREG                   L   EA+ KL L+EERR RAQ+VLA                          D                R    + +  +  A + A SG    D    G SAT   PG+ RLE VVTIDGTEVHLTAHV++V    A  G   GG ++ +P EMLLVAVDKK+RRSS LSL A DI EIV +H        +    G QGAL AV++KLT+FNSRRKDLFILSY+GK+V APH
Sbjct:   49 DSVKHAANQALAATSRSIEKTVASPTPEQAHVMGVESVVEGVEWNLSTEQLQAFRASGPHLLRRKYVSIGRDEHQRLFVAELSAIVRVASLDTNGSAEGARTASGRI-DTPLLD-FQRTTTDPANRCEGRTSHVDAATATKGFTLTCIEARSGSGSGSALEESEHRVHV------------PRAPPPLPDIAS-GRAHLDSGCTAASTDGRCYHQRPAAPAVYAVDLTHSEVDALVGPSLAWKDPFKRIPRYLSRESHADRSTANSNTLKTLKKEGSDTVRDLEATSWTACLDSLCRRLRATAKAVDAGREGALDGRPP-----VVGKQAFASDNTARSTSVDPSIGPSDPSDDSSALNEERPQQRYLREELPVDTAVEGQGCP-VPDTAKKMFSVASPWDGDTGSLDESQNRQAVQALPLLRRRPARHKTGEDL---FWLDKTILKVGARVPWGRLHRGRFAKMLFTVSLGKGCRGLDFVATSNSPTADPMLRGCWECQATDRDLARYLSPGRCGAVEGETRRRVRHDSYDPQRCAAELHERGELVWACAEIARKAFRLVMVVPGGVVLSLAGAPIAGGREVAWPQDVEEDRALIKASIELQRWWRGCISRKRTRWLRMEREGMRRLSRLREQAVAVKKKTEL---EAKAKLLLDEERRNRAQVVLATAARVQVARKEVSRRRAEQAARQCQVDRDVAAEREEAANSMPLR----QVELPAAAADDVALSGGIASDDPEVGISATDTAPGLARLETVVTIDGTEVHLTAHVKEVVDTDAARGSGDGGEDHKKPLEMLLVAVDKKSRRSSRLSLKAPDIAEIVASHXXXXXXXXAKITTGVQGALRAVVKKLTVFNSRRKDLFILSYKGKQVTAPH 893          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig84.16100.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMX6_ECTSI3.640e-19747.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K332_9PHAE1.970e-19647.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 652..672
NoneNo IPR availableCOILSCoilCoilcoord: 598..629
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 565..594
score: 7.218
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 630..659
score: 6.668

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig84contigC-linearis_contig84:344254..350827 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig84.16100.1mRNA_C-linearis_contig84.16100.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig84 344176..351952 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig84.16100.1 ID=prot_C-linearis_contig84.16100.1|Name=mRNA_C-linearis_contig84.16100.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=835bp
MHSRNDSAKRAASLALAATRSNIERTIAPPTLEQARVMGVESAVEGVDWK
LSTQQLQAFRASGLHLLGRKELSMGRDGHRRILVAELSAVVRAVPVDSEN
AMRPLRRCCQALNDERALDALQTTCLEHANQVSRGIAKIGAAAAESMAAF
RDESRGSGSSGGSLEEQKPRRGVEEDGTAHAGELFPQVPSSLPTTSTTGL
ADLQYGCSAASAGGKCHHRGVPVVFSQDFTHAELNALLGPTLSWKNPFEE
NRKTVGGLEASWTACRDSLCGRLRATVPEAGVCGEGADGGRPPGEREGVI
SPGGACGSRAVVAEKLEAVPGSTDGSRGKAAAPQPRQCVEEEGLAASADD
ERQVSPRVPVAAGDAAKTGHPAGLAAAAGDGETRGRAAQALPLVRRREAG
GKLEEDAGEGVWFDKAILRVGARVPWGRLHRGRFAKVLFTVSLGKAGNGL
EFAATSISPTADSMLRGIWDLRATDRDLARYLSSGYATVHGADCRVRPHA
YDPRRCAAELQERGELEWACAVIARTAFRLVLVVPGGVVLSLAGVAIVGG
REVAWPQDIEEDRMLYKASADIQRAWRGCTGRKRARWLRMEREGRRRLSR
MRNEAEGERERTRLLEEEAREKLALEEERRTRAQIVLAAATRGQSARRET
FRRRAEEAARQRQLDLEAAAEREGGEKAAAARSSLSRGDEESGEAHETAA
SGSRVDDHHGGSATPGVVRLERVVTIDGTEVHLTAHVRQVAVNGGGGEND
QPKEMLLVAVDKKARRSSSLSLDAADIGEIVGAHQGGGKDGGSVKKGGAQ
GALAAVLQKLTLFNSRRKDLFILSYRGKKVVAPH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS