prot_C-linearis_contig84.16086.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig84.16086.1
Unique Nameprot_C-linearis_contig84.16086.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length307
Homology
BLAST of mRNA_C-linearis_contig84.16086.1 vs. uniprot
Match: A0A6H5K2C6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2C6_9PHAE)

HSP 1 Score: 377 bits (967), Expect = 5.330e-129
Identity = 190/260 (73.08%), Postives = 215/260 (82.69%), Query Frame = 0
Query:   19 VTAAECWPIGRWGVAVVLASYIGFGGLKKKSLNKSGAIAGFCVGLVSLGLSLRLGLTLILFYKSSSVLTKVGSKKKKTLTDDYKEGGQRGAVQVLSCSLFATILAVVHKIFTGAGDSLVDFESEPLGGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLVTRPWRTVPAGTNGGMSLLGTVASVAAGGVTGTGFVLFGWMFRLPPPGSHEYSSSSSS----------QIPLIVLGAVSGLAGSVLDSLMGAILQGSYYD 268
            +  A+ WP+GRWGVA+V+ASY+   GLKKKSLN+SGA+A F VGLVSLGLSLR GLTLILFYKSSS+LTKVG ++K  LTDDYKEGGQRGA QVLSCSLFATILAV H + TGAGDSLVDFE +PL GALLCAYLGFYACCAGDTWSSELGVLSKTPPRL+T+PW+TVP GTNGGMSL+GTVAS AAG V G GFV FGW+FRL PP    +SS              Q+PL++LG VSGLAGS+LDSLMGA+LQ SY+D
Sbjct:    3 IELAQWWPLGRWGVALVIASYMSVSGLKKKSLNRSGAMAAFFVGLVSLGLSLRFGLTLILFYKSSSILTKVGFERKAKLTDDYKEGGQRGAAQVLSCSLFATILAVYHTVVTGAGDSLVDFEPDPLAGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPWKTVPPGTNGGMSLMGTVASAAAGVVMGAGFVCFGWVFRLSPPSPAGHSSPXXXXXXXXXXXXXQLPLVLLGGVSGLAGSILDSLMGAVLQASYFD 262          
BLAST of mRNA_C-linearis_contig84.16086.1 vs. uniprot
Match: D8LMW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW9_ECTSI)

HSP 1 Score: 314 bits (805), Expect = 2.400e-105
Identity = 158/194 (81.44%), Postives = 173/194 (89.18%), Query Frame = 0
Query:   19 VTAAECWPIGRWGVAVVLASYIGFGGLKKKSLNKSGAIAGFCVGLVSLGLSLRLGLTLILFYKSSSVLTKVGSKKKKTLTDDYKEGGQRGAVQVLSCSLFATILAVVHKIFTGAGDSLVDFESEPLGGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLVTRPWRTVPAGTNGGMSLLGTVASVAAGGVTGTG 212
            +  A+ WP+GRWGVA VLASY+   GLKKKSLN+SGA+A F VGLVSLGLSLRLGLTLILFYKSSS+LTKVG ++K  LTDDYKEGGQRGA QVLSCSLFATILAV H + TGAGDSLVDFES+PL GALLCAYLGFYACCAGDTWSSELGVLSKTPPRL+T+PW+TVP GTNGGMSL+GTVASVAAG V G G
Sbjct:    3 IELAQWWPLGRWGVASVLASYMSVSGLKKKSLNRSGAMAAFFVGLVSLGLSLRLGLTLILFYKSSSILTKVGFERKAKLTDDYKEGGQRGAAQVLSCSLFATILAVHHTVVTGAGDSLVDFESDPLAGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPWKTVPPGTNGGMSLMGTVASVAAGVVMGAG 196          
BLAST of mRNA_C-linearis_contig84.16086.1 vs. uniprot
Match: A0A7S2V002_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V002_9STRA)

HSP 1 Score: 280 bits (717), Expect = 1.340e-90
Identity = 160/284 (56.34%), Postives = 193/284 (67.96%), Query Frame = 0
Query:   27 IGRWGVAVVLASYIGFGGLKKKSLNKSGAIAGFCVGLVSLGLSLRLGLTLILFYKSSSVLTKVGSKKKKTLTDDYKEGGQRGAVQVLSCSLFATILAVVHKIFTGAGDSL---VDFESEPLGGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLVTRPWRTVPAGTNGGMSLLGTVASVAAGGVTGTGFVLFGWMFRLPPPGSHEYSSSSSSQIPLIVLGAVSGLAGSVLDSLMGAILQGSYYDENRKMVVEKTPAPSPSKGGLKLVCGRNILTNEQVNILSV 307
            + R G+A+  + Y+ F GLKK+SL++SGA A F VGLVSL +S RLGLTLILFYKSSS+LTKVG KKK  L D +   GQR A QVLSCS  A ++AV+     G  D L   V++ S P    LLCAYLG YACC GDTWSSELGVLS++PP L+T+PWRTVPAGTNGG+S +GT+A+ AAG V G GF+LFGWM   P  G          Q  LI  G + GL GS+LDSLMGA LQ +YYD  +K +  K    S     +  VCG +ILTNEQVN+LSV
Sbjct:   10 VPRCGLALAASLYLVFSGLKKRSLSRSGACAAFFVGLVSLSISARLGLTLILFYKSSSILTKVGQKKKAQLDDHHVTDGQRTATQVLSCSGIACVVAVIMYYLEGE-DMLAMGVNYSSHPTTSFLLCAYLGHYACCNGDTWSSELGVLSRSPPILITQPWRTVPAGTNGGVSTMGTLAAGAAGVVIGAGFLLFGWMQGAPQDG----------QYLLIPFGGMCGLLGSMLDSLMGATLQATYYDREKKCITSKVEGKSSD---VVRVCGYDILTNEQVNLLSV 279          
BLAST of mRNA_C-linearis_contig84.16086.1 vs. uniprot
Match: A0A7S2RII1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RII1_9STRA)

HSP 1 Score: 236 bits (603), Expect = 1.640e-73
Identity = 138/276 (50.00%), Postives = 173/276 (62.68%), Query Frame = 0
Query:   32 VAVVLASYIGFGGLKKKSLNKSGAIAGFCVGLVSLGLSLRLGLTLILFYKSSSVLTKVGSKKKKTLTDDYKEGGQRGAVQVLSCSLFATILAVVHKIFTGAGDSLVDFESEPLGGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLVTRPWRTVPAGTNGGMSLLGTVASVAAGGVTGTGFVLFGWMFRLPPPGSHEYSSSSSSQIPLIVLGAVSGLAGSVLDSLMGAILQGSYYDENRKMVVEKTPAPSPSKGGLKLVCGRNILTNEQVNILSV 307
            VA  +A  +G+ GL+KKSL+ SGA A   VG +S   S R GL LI FY+SSS LTK   ++K+ L   YKEGGQR A QV SCSL AT++AVV  +  G  D  VD  + P+  ALLCAYLG YACC GDTW+SELG L    PRLV  PWR VP GTNGGMS LGT AS+A G   G  FV+ G          H  S  + SQ+PLI LGA  G  GS++DS +GA LQ ++Y   ++++V   P+ +     +  + G +IL+NEQVN LSV
Sbjct:    8 VAAAVAGLLGWRGLRKKSLSPSGAAAAVLVGFLSFLASFRFGLVLIAFYQSSSSLTKFQGERKRRLEAGYKEGGQRDAEQVFSCSLLATVMAVVFLLTQGE-DQPVDSAAAPMRSALLCAYLGHYACCNGDTWASELGTLDSGLPRLVLAPWRKVPKGTNGGMSFLGTAASLAGGLFIGLVFVVCG---------PHS-SPGAPSQLPLIALGAAGGFVGSLIDSFLGATLQATFYHREKRIIV---PSSASDNADVDRITGVDILSNEQVNALSV 269          
BLAST of mRNA_C-linearis_contig84.16086.1 vs. uniprot
Match: K8YV45_NANGC (Uncharacterized protein (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YV45_NANGC)

HSP 1 Score: 229 bits (583), Expect = 5.890e-70
Identity = 124/284 (43.66%), Postives = 183/284 (64.44%), Query Frame = 0
Query:   32 VAVVLASYIGFGGLKKKSLNKSGAIAGFCVGLVSLGLSLRLGLTLILFYKSSSVLTKVGSKKKKTLTDDYKEGGQRGAVQVLSCSLFATILAVVHKIFTGAGDSLVDFESEPLGGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLVTRPWR-TVPAGTNGGMSLLGTVASVAAGGVTGTGFVLFGWMFRLPPPGSHEYSSSSSSQIP----LIVLGAVSGLAGSVLDSLMGAILQGSYYDENRKMVVEKTPAPSPSKGG---LKLVCGRNILTNEQVNILSV 307
            +A + A+ + + GL+K SL+KSGA+A + VG +S+G SLR G  +ILFY+SSS+LT+   + K  L +D+K+GGQR A QVL+CS   T++AV      G  D  ++FE+ PL   LLCAY+G YACC GDTW+SE+G+LS + PRLVT  +R  VP GTNGGMSL GT+AS+A G + GTG  + G++  +P        +S +   P    + V+GA  G  GS+ DS++G + Q ++Y   +K VV+   A      G   ++L+ G ++L+NE VN++S+
Sbjct:   33 MATIFATTLSYRGLRKHSLSKSGALAAWVVGFLSMGASLRFGALMILFYQSSSMLTRYRCETKALLEEDHKQGGQRSAAQVLACSFLGTLIAVAFVFLLGPDDLPLNFEASPLRSRLLCAYVGHYACCNGDTWASEIGILSPSSPRLVTAGFRRVVPRGTNGGMSLTGTLASIAGGALIGTGHSILGFVLGMPD------DASGAGWCPGWFFMTVIGAACGFIGSLSDSILGGLFQATWYCAEKKRVVKHPTAQERQGRGAEQVRLISGLDLLSNEHVNLISI 310          
BLAST of mRNA_C-linearis_contig84.16086.1 vs. uniprot
Match: A0A7S2U2Q7_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2U2Q7_9EUKA)

HSP 1 Score: 224 bits (571), Expect = 1.480e-68
Identity = 129/275 (46.91%), Postives = 167/275 (60.73%), Query Frame = 0
Query:   32 VAVVLASYIGFGGLKKKSLNKSGAIAGFCVGLVSLGLSLRLGLTLILFYKSSSVLTKVGSKKKKTLTDDYKEGGQRGAVQVLSCSLFATILAVVHKIFTGAGDSLVDFESEPLGGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLVTRPWRTVPAGTNGGMSLLGTVASVAAGGVTGTGFVLFGWMFRLPPPGSHEYSSSSSSQIPLIVLGAVSGLAGSVLDSLMGAILQGSYYDENRKMVVEKTPAPSPSKGGLKLVCGRNILTNEQVNILS 306
            +A   A  I   G +KKSL+  GA+A   VG ++LG++ R GLTL+LFY SSS LTK+G   K  L + + +  QRGA QVLSCS+   +LA+V+    G+ D  VD+++ P G  LLCAYLGF+ACC GDTW+SELG LSK     +      VP GTNGG+S LGT AS+A GG  G  +V+ G+ F +          SS  Q PL++ G   G  GSVLDS MGA LQ S+     K +V+    P P K     +CG NILTNEQVN++S
Sbjct:   16 IAFCCAGAIARRGYRKKSLSSGGAVAAMLVGGITLGITWRFGLTLLLFYGSSSQLTKIGKHAKDKLEEGHSKESQRGATQVLSCSMTGVVLAIVYASLVGSDDIPVDYDTNPTGSFLLCAYLGFFACCNGDTWASELGTLSKAKSATLITTLSDVPKGTNGGISFLGTAASIAGGGFIGLVYVVVGF-FTVE-------KKSSVPQWPLVLFGMGMGALGSVLDSFMGATLQESWMCRRTKKIVK----PPPMKDTYVKICGMNILTNEQVNLVS 278          
BLAST of mRNA_C-linearis_contig84.16086.1 vs. uniprot
Match: M4C455_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C455_HYAAE)

HSP 1 Score: 219 bits (559), Expect = 5.980e-67
Identity = 126/281 (44.84%), Postives = 173/281 (61.57%), Query Frame = 0
Query:   26 PIGRWGVAVVLASYIGFGGLKKKSLNKSGAIAGFCVGLVSLGLSLRLGLTLILFYKSSSVLTKVGSKKKKTLTDDYKEGGQRGAVQVLSCSLFATILAVVHKIFTGAGDSLVDFESEPLGGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLVTRPWRTVPAGTNGGMSLLGTVASVAAGGVTGTGFVLFGWMFRLPPPGSHEYSSSSSSQIPLIVLGAVSGLAGSVLDSLMGAILQGSYYDENRKMVVEKTPAPSPSKGGLKLVCGRNILTNEQVNILS 306
            P+ R  VA +LA ++G  GLKK+SL+ SGA A  CVG  +L    R G+ L+ FY S S LTKV +  K+ L  +YK+GGQR A QVL+CSL AT++AV   +  G  D  +DFES P    LL +Y+G YACCA DTW+SELGVLSK+ PRL+   W+ VP GTNGG+S+LG   S   G   G  +     +             S ++Q+ ++ LGAV+GL GS LDS++GA LQ +YYD   + + ++ P        ++ +CGR  L+NEQVN++S
Sbjct:    4 PLSRVLVAALLAGWLGRRGLKKQSLDVSGAAAACCVGFFTLASGYRFGVLLLGFYFSGSKLTKVRASVKQQLDANYKQGGQRSARQVLACSLVATLIAVYFVVRFGHDDVALDFESAPESSFLLASYIGHYACCAADTWASELGVLSKSEPRLI-MTWKRVPPGTNGGVSVLGLAVSALGGAFIGALYFATSLL-------------SGTAQLHVVTLGAVTGLFGSALDSILGATLQATYYDRATRKICDEAPH-------VEHICGRKWLSNEQVNVVS 263          
BLAST of mRNA_C-linearis_contig84.16086.1 vs. uniprot
Match: R1C669_EMIHU (Uncharacterized protein (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1C669_EMIHU)

HSP 1 Score: 218 bits (554), Expect = 4.190e-66
Identity = 126/281 (44.84%), Postives = 170/281 (60.50%), Query Frame = 0
Query:   27 IGRWGVAVVLASYIGFGGLKKKSLNKSGAIAGFCVGLVSLGLSLRLGLTLILFYKSSSVLTKVGSKKKKTLTDDYKEGGQRGAVQVLSCSLFATILAVVHKIFTGAGDSLVDFES-EPLGGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLVTRPWRTVPAGTNGGMSLLGTVASVAAGGVTGTGFVLFGWMFRLPPPGSHEYSSSSSSQIPLIVLGAVSGLAGSVLDSLMGAILQGSYYDENRKMVVEKTPAPSPSKGGLKLVCGRNILTNEQVNILS 306
            + R     ++A  +  GGLK+ SL + GA A F VGL+S   S+R G+TL+ FYKS S+LT+VG+  K+ + + Y   GQRGA QVL+CS      AV+ +   G  D+ +DF      G  L  AY+ F+ACCAGDTW+SELGVLS +PPR++T+PWRT PAGTNGG+S+LGT+AS A G   G           LPP G           + L+  G V G+ GS+LDSL+GA +Q +YYDE  +MVV + P P   +     V G  +L+NE VN +S
Sbjct:    5 LARTSAGTLIAYKLATGGLKRGSLQRDGAAAAFVVGLLSFSCSIRCGVTLLFFYKSGSMLTRVGADVKRKVEEGYAAEGQRGAAQVLACSAVGVAAAVLRRALVGP-DAPLDFSDLASAGNRLTLAYVSFFACCAGDTWASELGVLSASPPRIITQPWRTAPAGTNGGVSVLGTLASAAGGACIGACHAAC----LLPPSGREA--------LGLVWAGLVGGVGGSLLDSLLGATVQATYYDEASRMVVGR-PTPKARR-----VAGLPLLSNEMVNFVS 266          
BLAST of mRNA_C-linearis_contig84.16086.1 vs. uniprot
Match: A0A7S2N4E0_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2N4E0_9EUKA)

HSP 1 Score: 216 bits (550), Expect = 1.160e-65
Identity = 118/264 (44.70%), Postives = 168/264 (63.64%), Query Frame = 0
Query:   43 GGLKKKSLNKSGAIAGFCVGLVSLGLSLRLGLTLILFYKSSSVLTKVGSKKKKTLTDDYKEGGQRGAVQVLSCSLFATILAVVHKIFTGAGDSLVDFESEPLGGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLVTRPWRTVPAGTNGGMSLLGTVASVAAGGVTGTGFVLFGWMFRLPPPGSHEYSSSSSSQIPLIVLGAVSGLAGSVLDSLMGAILQGSYYDENRKMVVEKTPAPSPSKGGLKLVCGRNILTNEQVNILS 306
            GG K+ SLN+ GA A F V  ++   SLR G+TL++FYK+ S+LTKVG+  K  L D Y   GQRGA QVL+CS  A   AV  ++  G    +   + + LG  L  A++ F+ACCAGDT++SELG+LS++PPR+VT+PW+  P GTNGG++ LGT+AS   G   G    +F  +  L PP +HE ++       L  +G ++G+ GS+LDSL+GA +Q +YYDE RK++V+K  A +      K V G  +L+NE VN +S
Sbjct:    5 GGYKRGSLNRDGATAAFVVAALAFSCSLRSGMTLLVFYKTGSMLTKVGASVKNKLEDGYAAEGQRGASQVLACSAIAVACAVARRLLVGTDGPIDLADVQCLGNRLTLAFVAFFACCAGDTYASELGILSRSPPRIVTQPWKVAPPGTNGGITALGTLASAGGGVCMGLCHAVF--LGPLLPPSAHECAA-------LTYVGLLAGVGGSILDSLLGATVQATYYDEERKLIVKKQSAAT------KCVSGFPLLSNEMVNFVS 253          
BLAST of mRNA_C-linearis_contig84.16086.1 vs. uniprot
Match: A0A1W0A0M5_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A0M5_9STRA)

HSP 1 Score: 213 bits (541), Expect = 3.900e-64
Identity = 126/276 (45.65%), Postives = 168/276 (60.87%), Query Frame = 0
Query:   32 VAVVLASYIGFGGLKKKSLNKSGAIAGFCVGLVSLGLSLRLGLTLILFYKSSSVLTKVGSKKKKTLTDDYKEGGQRGAVQVLSCSLFATILAVVHKIFTGAGDSLVDFESEPLGGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLVTRPWRTVPAGTNGGMSLLGTVASVAAGGVTGTGFVLFGWMFRLPPPGSHEYSSSSSSQIPLIVLGAVSGLAGSVLDSLMGAILQGSYYDENRKMVVEKTPAPSPSKGGLKLVCGRNILTNEQVNILSV 307
            V +++     + GL+KKSL+KSGAIA F VG  S+G   R G+ L+ FY S S LT     +K  +    KEGGQR A QVL+CSL A I+ V++    G  D+ +D   +P    L   Y+G YACCA DTW+SELGVLS +PP L+T+ W  VP GTNGG+S +GT+AS A G   G  F ++G +F LP        S+S  Q P I  G VSGL GS LDSL+GA +Q ++YD+  K +  +     P     + VCG ++LTNEQVN++SV
Sbjct:    9 VGLLVGFLAAYRGLRKKSLDKSGAIAAFVVGATSMGCGYRFGILLLGFYFSGSKLTTFQENRKAMMDASVKEGGQRSARQVLACSLLACIVCVIYASVVG-DDAQIDPIKQPTATFLWGCYIGHYACCAADTWASELGVLSPSPPVLITKFWIKVPTGTNGGISCVGTLASAAGGAFIGLLFYVYGVIF-LP--------STSVPQWPSITFGLVSGLFGSFLDSLLGATIQATWYDDTTKKIAPRPLKTQPFT--YRHVCGYDVLTNEQVNLVSV 272          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig84.16086.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K2C6_9PHAE5.330e-12973.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMW9_ECTSI2.400e-10581.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2V002_9STRA1.340e-9056.34Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2RII1_9STRA1.640e-7350.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
K8YV45_NANGC5.890e-7043.66Uncharacterized protein (Fragment) n=2 Tax=Nannoch... [more]
A0A7S2U2Q7_9EUKA1.480e-6846.91Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
M4C455_HYAAE5.980e-6744.84Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
R1C669_EMIHU4.190e-6644.84Uncharacterized protein (Fragment) n=2 Tax=Emilian... [more]
A0A7S2N4E0_9EUKA1.160e-6544.70Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A1W0A0M5_9STRA3.900e-6445.65Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002794Protein of unknown function DUF92, TMEM19PFAMPF01940DUF92coord: 37..306
e-value: 4.7E-68
score: 229.1
IPR002794Protein of unknown function DUF92, TMEM19PANTHERPTHR13353FAMILY NOT NAMEDcoord: 30..306
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 81..107
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 126..195
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 46..56
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 263..307
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..80
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..26
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 108..125
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 196..220
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 240..262
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 221..239
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 27..45
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..21
score: 0.568
NoneNo IPR availableTMHMMTMhelixcoord: 58..80
NoneNo IPR availableTMHMMTMhelixcoord: 198..220
NoneNo IPR availableTMHMMTMhelixcoord: 240..262
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig84contigC-linearis_contig84:64723..69747 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig84.16086.1mRNA_C-linearis_contig84.16086.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig84 64723..69747 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig84.16086.1 ID=prot_C-linearis_contig84.16086.1|Name=mRNA_C-linearis_contig84.16086.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=307bp
TVRFRCYPHLLIFLRFTMVTAAECWPIGRWGVAVVLASYIGFGGLKKKSL
NKSGAIAGFCVGLVSLGLSLRLGLTLILFYKSSSVLTKVGSKKKKTLTDD
YKEGGQRGAVQVLSCSLFATILAVVHKIFTGAGDSLVDFESEPLGGALLC
AYLGFYACCAGDTWSSELGVLSKTPPRLVTRPWRTVPAGTNGGMSLLGTV
ASVAAGGVTGTGFVLFGWMFRLPPPGSHEYSSSSSSQIPLIVLGAVSGLA
GSVLDSLMGAILQGSYYDENRKMVVEKTPAPSPSKGGLKLVCGRNILTNE
QVNILSV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002794DUF92_TMEM19