prot_C-linearis_contig83.16069.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig83.16069.1
Unique Nameprot_C-linearis_contig83.16069.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length338
Homology
BLAST of mRNA_C-linearis_contig83.16069.1 vs. uniprot
Match: D7FWW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW6_ECTSI)

HSP 1 Score: 326 bits (835), Expect = 1.190e-100
Identity = 173/347 (49.86%), Postives = 230/347 (66.28%), Query Frame = 0
Query:    1 MNMELGVGIDPFHQCSQNSSRKVLRWVFGGLSETFGKPLVASRARDPHLRMPGNPPLRDIVKDSGFAAQTGMEVWGLMGVVLLLARPVLTNVASMKRHFTKPFISTLKKKLKAGSHE-----PVLEKLRDLLWAASVATYYVRLGFYGEEDAKEVHRTQRDKVTLMGEMIPDKDGGRLCSNHQGLHYSKNIDSLGELIDCHAEESRYKSLKSSSRTSRGREIELHIIQRENDVMAADAMMEGQAWVASAFDKKTQSWVPETLRAGPTCIELLEMVSE-KIGKQRGHGTGMPRGVQEWSVDLSNSVEPAAASGWEREVLRVLRQPA---LKLLDHYKAWFSCTRQTGD 338
            +NM    GID FHQ +QNS  K+ + + GGLS+  G PL++  A+DP LR+ G PPLRD V D GF+A +GM+VW L  V LL+ RPVL +VASMKR  T PF + ++ +L A +        V+EKLR LL A+S AT+ +R   + +E    + R QR+KV+LM  M+ DK GGRLCSNHQGLH++KN    GEL DCHA ESR+KS KS ++T+ GR+ E HI++REND MAA+AM EG  W A  +DK  + WV +T++A P C ELL  +SE +IG +R HGTG PRG+ EW+V L       +A GW+  +  +LR+     L LLD YKAWFSC R+T +
Sbjct:  572 LNMVRTFGIDVFHQDAQNSLLKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVWRLSSVALLVFRPVLRSVASMKRLTTAPFRNDIRAELGATTDTVVTDTEVMEKLRALLLASSKATHLLRSSSFNDETVASIDRLQREKVSLMS-MLGDKHGGRLCSNHQGLHFAKNATDYGELSDCHAGESRHKSFKSCAKTASGRDNEEHIVRRENDAMAAEAMAEGVRWTAWGYDKTKRGWVKKTVQASPACRELLRTISEWEIGARR-HGTGRPRGIVEWNVRLGRQAAAPSAQGWQETIGALLRRTGPGGLDLLDLYKAWFSCGRETSN 916          
BLAST of mRNA_C-linearis_contig83.16069.1 vs. uniprot
Match: D8LJH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJH2_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 1.830e-34
Identity = 85/205 (41.46%), Postives = 120/205 (58.54%), Query Frame = 0
Query:    1 MNMELGVGIDPFHQCSQNSSRKVLRWVFGGLSETFGKPLVASRARDPHLRMPGNPPLRDIVKDSGFAAQTGMEVWGLMGVVLLLARPVLTNVASMKRHFTKPFISTLKKKLKAGSHE-----PVLEKLRDLLWAASVATYYVRLGFYGEEDAKEVHRTQRDKVTLMGEMIPDKDGGRLCS----NHQGLHYSKNIDSLGELIDCH 196
            +NM    GID FHQ +QNS RK+ + + GGLS+  G PL++  A+DP LR+ G PPLRD V D GF+A +GM+VW L  V LL+ RPVL +VASMKR  T PF + ++ +L A +        V+EKLR LL A+S AT+ +R   + +E    + R+QR+K TL   + P    G+  S       G H++ + +    L   H
Sbjct:  280 LNMVRTFGIDLFHQDAQNSLRKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVWTLSSVALLVFRPVLRSVASMKRLTTAPFRNDIRAELGATTDTVVTDTEVMEKLRALLLASSEATHLLRSSSFNDETVASIDRSQREK-TLQSSIFPGDQRGQRASFYDRRQNGSHWNNDKERRVFLTPAH 483          
BLAST of mRNA_C-linearis_contig83.16069.1 vs. uniprot
Match: A0A6H5K7J0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7J0_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 1.730e-30
Identity = 93/282 (32.98%), Postives = 132/282 (46.81%), Query Frame = 0
Query:   72 MEVWGLMGVVLLLARPVLTNVASMKRHFTKPFISTLKKKLKAGSHEPVLEKLRDLLWAASVATYYVRLGFYGEEDAKEVHRTQRDKVTLMGEMIPDKDGGRLCSNHQGLHYSKNIDSLGELIDCHAEESRYKSLK-----------SSSRTSRGREIELHIIQRENDVMAADAMMEGQAWVASAFDKKTQSWVPETLRAGPTCIELLEMVSE-KIGKQRGHGTGMPRGVQEWSVDLSNSVEPAAASGWEREVLRVLR---QPALKLLDHYKAWFSCTRQTGD 338
            M+VW L  V LL+ RP L +VASMK   T PF   ++ +LKA                                       T    V+LM  +I ++  GRLCSNHQGLH++KN       +    + S+ +  +           +S  T+ GR+ E HI++REND  AA+ M EG  W A   DK  + WV +T++A P+C ELL  +SE +IG +   G     G       +S +     A  W+ ++  +LR   Q  L LLD YKAWFSC R+  +
Sbjct:    1 MDVWRLSSVALLVFRPAL-SVASMKHLTTAPFRKDVQSELKA---------------------------------------TTATVVSLMSMLIGEQHRGRLCSNHQGLHFAKNATPY---VVIRVQTSKQQDAEKFNANHGIPHGASLLTASGRDNEEHIVRRENDATAAEVMAEGARWTAWRDDKTMREWVKKTVQASPSCRELLRAISEWEIGTRTAPGD---HGESLSGTPVSGNRLRLRAQRWQEKIGALLRRTGQGGLNLLDLYKAWFSCGREKSN 236          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig83.16069.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FWW6_ECTSI1.190e-10049.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LJH2_ECTSI1.830e-3441.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7J0_9PHAE1.730e-3032.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig83contigC-linearis_contig83:629376..631247 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig83.16069.1mRNA_C-linearis_contig83.16069.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig83 626812..631247 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig83.16069.1 ID=prot_C-linearis_contig83.16069.1|Name=mRNA_C-linearis_contig83.16069.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=338bp
MNMELGVGIDPFHQCSQNSSRKVLRWVFGGLSETFGKPLVASRARDPHLR
MPGNPPLRDIVKDSGFAAQTGMEVWGLMGVVLLLARPVLTNVASMKRHFT
KPFISTLKKKLKAGSHEPVLEKLRDLLWAASVATYYVRLGFYGEEDAKEV
HRTQRDKVTLMGEMIPDKDGGRLCSNHQGLHYSKNIDSLGELIDCHAEES
RYKSLKSSSRTSRGREIELHIIQRENDVMAADAMMEGQAWVASAFDKKTQ
SWVPETLRAGPTCIELLEMVSEKIGKQRGHGTGMPRGVQEWSVDLSNSVE
PAAASGWEREVLRVLRQPALKLLDHYKAWFSCTRQTGD
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