prot_C-linearis_contig83.16040.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig83.16040.1
Unique Name	prot_C-linearis_contig83.16040.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	169

Homology

[Close]

BLAST of mRNA_C-linearis_contig83.16040.1 vs. uniprot
Match: A0A6H5L3B4_9PHAE (NADAR domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3B4_9PHAE)

HSP 1 Score: 191 bits (484), Expect = 1.330e-56
Identity = 95/161 (59.01%), Postives = 119/161 (73.91%), Query Frame = 0

Query:    3 DDVVLFWKPPSCFSNGTPSSFTVLGVLYTCGEQYMMSENARLSNDSSICSQTMATSRPQDHQALGRRDRNFDHAEWERLREDFVLTGTYAKFAQSSLLRQHLSSTGDRTLVEASPIAHLWGIGLAACHPDAAFPACW--TGRNLLGKAVIEDRRLLRDAPL 161
            DDV+LFWKPPS FS  TPS+F VLGV Y+CGEQ+MMSE A+L  D +   + MA + P+ H+ LGR  R FD+AEWER RE+ VLTG+YAKFAQ+  ++ HL  TG R L EASP    WGIG++AC PDA+  + W  +G+NLLGKA++E RRLLRD PL
Sbjct:   76 DDVLLFWKPPSVFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDLTSYDKIMAATDPKTHKFLGRNVRPFDYAEWERRREEIVLTGSYAKFAQNHDMKHHLLETGTRLLAEASPFDRFWGIGMSACFPDASVSSKWAASGKNLLGKALMEVRRLLRDHPL 236

[Close]

BLAST of mRNA_C-linearis_contig83.16040.1 vs. uniprot
Match: A0A6H5JDD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDD1_9PHAE)

HSP 1 Score: 191 bits (484), Expect = 1.970e-54
Identity = 95/161 (59.01%), Postives = 120/161 (74.53%), Query Frame = 0

Query:    3 DDVVLFWKPPSCFSNGTPSSFTVLGVLYTCGEQYMMSENARLSNDSSICSQTMATSRPQDHQALGRRDRNFDHAEWERLREDFVLTGTYAKFAQSSLLRQHLSSTGDRTLVEASPIAHLWGIGLAACHPDAAFPACW--TGRNLLGKAVIEDRRLLRDAPL 161
            DDV+LFWKPPS FS  TPS+F VLGV Y+CGEQ+MMSE A+L  D +   + MA + P+ H+ LGR  R FD+AEWER RE+ VLTG+YAKFAQ+  ++ HL  TG R L EASP   +WGIG++AC PDA+  + W  +G+NLLGKA++E RRLLRD PL
Sbjct:   76 DDVLLFWKPPSVFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDMTSYDKIMAATDPKTHKFLGRNVRPFDYAEWERRREEIVLTGSYAKFAQNHDMKHHLLETGTRLLAEASPFDRVWGIGMSACFPDASDSSKWAASGKNLLGKALMEVRRLLRDHPL 236

[Close]

BLAST of mRNA_C-linearis_contig83.16040.1 vs. uniprot
Match: A0A6H5JIZ7_9PHAE (NADAR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIZ7_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 2.530e-54
Identity = 92/161 (57.14%), Postives = 116/161 (72.05%), Query Frame = 0

Query:    3 DDVVLFWKPPSCFSNGTPSSFTVLGVLYTCGEQYMMSENARLSNDSSICSQTMATSRPQDHQALGRRDRNFDHAEWERLREDFVLTGTYAKFAQSSLLRQHLSSTGDRTLVEASPIAHLWGIGLAACHPDAAFPACW--TGRNLLGKAVIEDRRLLRDAPL 161
            DDV+LFWKPPS  S  TPS F VLGV Y+CGEQYMMSE A+L  D +   + MA   P+ H+ LGR  R FD+AEWER RE+ VLTG+YAKFAQ+  ++ HL  TG R L E+SP   +WGIG++AC P+A+  + W  +G+NLLGKA++E RRLLRD  L
Sbjct:   76 DDVLLFWKPPSVSSQWTPSVFNVLGVRYSCGEQYMMSEKAKLFGDMTSYDKIMAAPDPKTHKFLGRNVRPFDYAEWERRREEIVLTGSYAKFAQNHDMKHHLLETGTRLLAESSPFDRVWGIGMSACFPEASVSSKWAASGKNLLGKALMEVRRLLRDHSL 236

[Close]

BLAST of mRNA_C-linearis_contig83.16040.1 vs. uniprot
Match: A0A6H5KWH8_9PHAE (NADAR domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWH8_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 2.020e-53
Identity = 90/157 (57.32%), Postives = 116/157 (73.89%), Query Frame = 0

Query:    7 LFWKPPSCFSNGTPSSFTVLGVLYTCGEQYMMSENARLSNDSSICSQTMATSRPQDHQALGRRDRNFDHAEWERLREDFVLTGTYAKFAQSSLLRQHLSSTGDRTLVEASPIAHLWGIGLAACHPDAAFPACW--TGRNLLGKAVIEDRRLLRDAPL 161
            LFWKPPS FS  TPS+F VLGV Y+CGEQ+MMSE A+L  D +   + M  + P+ ++ LGR+ R FD+AEWER RE+ VLTG+YAKFAQ+  ++QHL +TG R L EASP   +WGIG+AA  P+A+  + W  +GRNLLGK ++E RRLLRD PL
Sbjct:    5 LFWKPPSGFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDMASYDKIMTATDPKTYKYLGRKVRPFDYAEWERRREEIVLTGSYAKFAQNPAMKQHLMATGTRFLAEASPFDPVWGIGMAATSPEASDSSNWPNSGRNLLGKVLMEVRRLLRDRPL 161

[Close]

BLAST of mRNA_C-linearis_contig83.16040.1 vs. uniprot
Match: A0A6H5K8W4_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W4_9PHAE)

HSP 1 Score: 191 bits (484), Expect = 4.410e-53
Identity = 95/161 (59.01%), Postives = 120/161 (74.53%), Query Frame = 0

Query:    3 DDVVLFWKPPSCFSNGTPSSFTVLGVLYTCGEQYMMSENARLSNDSSICSQTMATSRPQDHQALGRRDRNFDHAEWERLREDFVLTGTYAKFAQSSLLRQHLSSTGDRTLVEASPIAHLWGIGLAACHPDAAFPACW--TGRNLLGKAVIEDRRLLRDAPL 161
            DDV+LFWKPPS FS  TPS+F VLGV Y+CGEQ+MMSE A+L  D +   + MA + P+ H+ LGR  R FD+AEWER RE+ VLTG+YAKFAQ+  ++ HL  TG R L EASP   +WGIG++AC PDA+  + W  +G+NLLGKA++E RRLLRD PL
Sbjct:  593 DDVLLFWKPPSVFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDMTSYDKIMAATDPKTHKFLGRNVRPFDYAEWERRREEIVLTGSYAKFAQNHDMKHHLLETGTRLLAEASPFDRVWGIGMSACFPDASDSSKWAASGKNLLGKALMEVRRLLRDHPL 753

[Close]

BLAST of mRNA_C-linearis_contig83.16040.1 vs. uniprot
Match: A0A6H5JVW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVW3_9PHAE)

HSP 1 Score: 191 bits (484), Expect = 4.790e-53
Identity = 95/161 (59.01%), Postives = 120/161 (74.53%), Query Frame = 0

Query:    3 DDVVLFWKPPSCFSNGTPSSFTVLGVLYTCGEQYMMSENARLSNDSSICSQTMATSRPQDHQALGRRDRNFDHAEWERLREDFVLTGTYAKFAQSSLLRQHLSSTGDRTLVEASPIAHLWGIGLAACHPDAAFPACW--TGRNLLGKAVIEDRRLLRDAPL 161
            DDV+LFWKPPS FS  TPS+F VLGV Y+CGEQ+MMSE A+L  D +   + MA + P+ H+ LGR  R FD+AEWER RE+ VLTG+YAKFAQ+  ++ HL  TG R L EASP   +WGIG++AC PDA+  + W  +G+NLLGKA++E RRLLRD PL
Sbjct:   76 DDVLLFWKPPSVFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDMTSYDKIMAATDPKTHKFLGRNVRPFDYAEWERRREEIVLTGSYAKFAQNHDMKHHLLETGTRLLAEASPFDRVWGIGMSACFPDASDSSKWAASGKNLLGKALMEVRRLLRDHPL 236

[Close]

BLAST of mRNA_C-linearis_contig83.16040.1 vs. uniprot
Match: A0A6H5J9B4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9B4_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 1.230e-52
Identity = 94/161 (58.39%), Postives = 118/161 (73.29%), Query Frame = 0

Query:    3 DDVVLFWKPPSCFSNGTPSSFTVLGVLYTCGEQYMMSENARLSNDSSICSQTMATSRPQDHQALGRRDRNFDHAEWERLREDFVLTGTYAKFAQSSLLRQHLSSTGDRTLVEASPIAHLWGIGLAACHPDAAFPACW--TGRNLLGKAVIEDRRLLRDAPL 161
            DDV+LFWKPPS FS  TPS+F VLGV Y+CGEQ+MMSE A+L  D +   + MA + P+ H+ LGR  R FD+AEWER RE+ VLTG+YAKFAQ+  ++ HL  TG R L EASP    WGIG++AC PDA+  + W  +G+NLLG A++E RRLLRD PL
Sbjct: 1033 DDVLLFWKPPSVFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDMTSYDKIMAATDPKTHKFLGRNVRPFDYAEWERRREEIVLTGSYAKFAQNHYMKHHLLETGTRLLAEASPFDRFWGIGMSACFPDASDSSKWAASGKNLLGNALMEVRRLLRDHPL 1193

[Close]

BLAST of mRNA_C-linearis_contig83.16040.1 vs. uniprot
Match: A0A6H5KMH8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMH8_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 1.640e-52
Identity = 95/161 (59.01%), Postives = 119/161 (73.91%), Query Frame = 0

Query:    3 DDVVLFWKPPSCFSNGTPSSFTVLGVLYTCGEQYMMSENARLSNDSSICSQTMATSRPQDHQALGRRDRNFDHAEWERLREDFVLTGTYAKFAQSSLLRQHLSSTGDRTLVEASPIAHLWGIGLAACHPDAAFPACW--TGRNLLGKAVIEDRRLLRDAPL 161
            DDV+LFWKPPS FS  TPS+F VLGV Y+CGEQYMMSENA+L  D +   + MA + P+ H+ LGR  R FD+AEWER RE+ VLTG  AKFAQ+  ++ HL  TG R L EASP   +WGIG++AC PDA+  + W  +G++LLGKA++E RRLLRD PL
Sbjct:  251 DDVLLFWKPPSVFSQWTPSAFDVLGVRYSCGEQYMMSENAKLFGDMTSYEKIMAATDPKTHKFLGRNVRPFDYAEWERRREEIVLTGLCAKFAQNHDMKHHLLETGTRLLAEASPFDRVWGIGMSACFPDASVSSKWAASGKSLLGKALMEVRRLLRDHPL 411

[Close]

BLAST of mRNA_C-linearis_contig83.16040.1 vs. uniprot
Match: A0A6H5K020_9PHAE (NADAR domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K020_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 2.250e-52
Identity = 94/161 (58.39%), Postives = 119/161 (73.91%), Query Frame = 0

Query:    3 DDVVLFWKPPSCFSNGTPSSFTVLGVLYTCGEQYMMSENARLSNDSSICSQTMATSRPQDHQALGRRDRNFDHAEWERLREDFVLTGTYAKFAQSSLLRQHLSSTGDRTLVEASPIAHLWGIGLAACHPDAAFPACW--TGRNLLGKAVIEDRRLLRDAPL 161
            DDV+LFWKPPS FS  TPS+F VLGV Y+CGE +MMSE A+L  D +   + MA + P+ H+ LGR  R FD+AEWER RE+ VLTG+YAKFAQ+  ++ HL  TG R L EASP   +WGIG++AC PDA+  + W  +G+NLLGKA++E RRLLRD PL
Sbjct:  760 DDVLLFWKPPSVFSQWTPSAFDVLGVRYSCGEHFMMSEKAKLFGDMTSYDKIMAATDPKIHKFLGRNVRPFDYAEWERRREEIVLTGSYAKFAQNHDMKHHLLETGTRLLAEASPFDRVWGIGMSACFPDASVSSKWAASGKNLLGKALMEVRRLLRDHPL 920

[Close]

BLAST of mRNA_C-linearis_contig83.16040.1 vs. uniprot
Match: A0A6H5KUS0_9PHAE (NADAR domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUS0_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 3.000e-52
Identity = 91/160 (56.88%), Postives = 119/160 (74.38%), Query Frame = 0

Query:    3 DDVVLFWKPPSCFSNGTPSSFTVLGVLYTCGEQYMMSENARLSNDSSICSQTMATSRPQDHQALGRRDRNFDHAEWERLREDFVLTGTYAKFAQSSLLRQHLSSTGDRTLVEASPIAHLWGIGLAACHPDAAFPACW--TGRNLLGKAVIEDRRLLRDAP 160
            +DV+LFWKPPS FS  TPS+F VLGV Y+CGEQ+MMSE A+L  D +   + M  + P+ ++ LGR+ R FD+AEWER RE+ VLTG+YAKFAQ+  ++QHL +TG R L EASP   +WGIG+AA  P+A+  + W  +GRNLLGK ++E RRLLRD P
Sbjct:   77 NDVLLFWKPPSVFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDMASYDKIMTATDPKTYKYLGRKVRPFDYAEWERRREEIVLTGSYAKFAQNPAMKQHLMATGTRFLAEASPFDPVWGIGMAATSPEASDSSNWPNSGRNLLGKVLMEVRRLLRDRP 236

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig83.16040.1 vs. uniprot

BLAST of mRNA_C-linearis_contig83.16040.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L3B4_9PHAE	1.330e-56	59.01	NADAR domain-containing protein (Fragment) n=1 Tax...	[more]
A0A6H5JDD1_9PHAE	1.970e-54	59.01	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JIZ7_9PHAE	2.530e-54	57.14	NADAR domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5KWH8_9PHAE	2.020e-53	57.32	NADAR domain-containing protein (Fragment) n=1 Tax...	[more]
A0A6H5K8W4_9PHAE	4.410e-53	59.01	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5JVW3_9PHAE	4.790e-53	59.01	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5J9B4_9PHAE	1.230e-52	58.39	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KMH8_9PHAE	1.640e-52	59.01	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5K020_9PHAE	2.250e-52	58.39	NADAR domain-containing protein (Fragment) n=1 Tax...	[more]
A0A6H5KUS0_9PHAE	3.000e-52	56.88	NADAR domain-containing protein (Fragment) n=1 Tax...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012816	NADAR	TIGRFAM	TIGR02464	TIGR02464	coord: 7..155 e-value: 1.9E-35 score: 120.3
IPR012816	NADAR	PFAM	PF08719	DUF1768	coord: 8..157 e-value: 6.3E-36 score: 124.0
IPR037238	YbiA-like superfamily	GENE3D	1.10.357.40		coord: 3..164 e-value: 3.7E-28 score: 100.0
IPR037238	YbiA-like superfamily	SUPERFAMILY	143990	YbiA-like	coord: 3..158

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig83	contig	C-linearis_contig83:153416..153922 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig83.16040.1	mRNA_C-linearis_contig83.16040.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig83 153416..153922 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig83.16040.1 ID=prot_C-linearis_contig83.16040.1|Name=mRNA_C-linearis_contig83.16040.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=169bp
VFDDVVLFWKPPSCFSNGTPSSFTVLGVLYTCGEQYMMSENARLSNDSSI
CSQTMATSRPQDHQALGRRDRNFDHAEWERLREDFVLTGTYAKFAQSSLL
RQHLSSTGDRTLVEASPIAHLWGIGLAACHPDAAFPACWTGRNLLGKAVI
EDRRLLRDAPLEIAAQALP

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012816	NADAR
IPR037238	YbiA-like_sf