prot_C-linearis_contig82.16028.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig82.16028.1
Unique Nameprot_C-linearis_contig82.16028.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length320
Homology
BLAST of mRNA_C-linearis_contig82.16028.1 vs. uniprot
Match: D7FII9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FII9_ECTSI)

HSP 1 Score: 427 bits (1097), Expect = 8.720e-148
Identity = 233/325 (71.69%), Postives = 264/325 (81.23%), Query Frame = 0
Query:    3 RGNVS---VHVVLLLVCCVQSSNGFVAFARSGRVSP-LSRGCLHKTLACTADDLHKREGRGGWRHAGLVRRRSGYP---LRATEEGG-TEEEEDTLELTKGFYSEIAARLGKTPGETAKIEVEEDSQQADTDTDKDDSGSQIDKAIYDELRARRDFGFEQDLGLELEKRNITKEAEVTKIVDAGLDQMPGVSSSTTFLPTPELTPREVVTSVLEALKNNDHPYHNHGVEVFMRFLSPSSAMYGVEMAGVARYLAENRNRAFMRWDAIAYPRPLTLSGGAKQNKAFQPLKLKDTMTGAWHSVSVYLTLDARSNCWLIESCIVKGEL 319
            +GN++   +HV+LLL CCVQ S+GF+A      VSP   RGC  +TL+ T +DLHKRE RG  RH  L+RRRSG P   L+A E GG  EEE+DTLELTKGFYSEIAARLGKT     +     DSQ+   D   +DSGS       DELRARRDFGFEQDLGLELEKRNITKEAE  KI+DAGL+QMPGV+SS TFLP+ ELTPREVVTSVLEALKNND PYHNHGVEVF+RFL+PSSAM+GVEM+GVARYLAENRNRAFM W+ +A+PRPLT+SGGAKQNKAFQP+KL+DTMTGAWHSVSVYLTLDARSNCWLIESCIVKGE+
Sbjct:    4 QGNLAAGGLHVLLLLCCCVQWSHGFIA------VSPCFRRGCSQQTLSST-NDLHKRESRGSGRHGSLIRRRSGGPGFSLKANEAGGGAEEEDDTLELTKGFYSEIAARLGKTAQGQPQ-----DSQETAKD---EDSGSXXXXXXXDELRARRDFGFEQDLGLELEKRNITKEAEAKKIIDAGLEQMPGVTSSATFLPSSELTPREVVTSVLEALKNNDQPYHNHGVEVFIRFLAPSSAMHGVEMSGVARYLAENRNRAFMHWNTMAFPRPLTVSGGAKQNKAFQPVKLRDTMTGAWHSVSVYLTLDARSNCWLIESCIVKGEV 313          
BLAST of mRNA_C-linearis_contig82.16028.1 vs. uniprot
Match: A0A7R9YD20_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YD20_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 1.140e-13
Identity = 67/251 (26.69%), Postives = 119/251 (47.41%), Query Frame = 0
Query:   95 GFYSEIAARLGKTPGETAKIEVEEDSQQADTDTDKDDSGSQI--DKAIYDELRARRDFGFEQDLGL----ELEKRNITKEAEVTKIV--------------DAGLDQMPGVSSSTTFLPTPELTPREVVTSVLEALKNNDHPYHNHGVEVFMRFLSPSSAMYGVEMAGVARY---LAENRNRAFMRWDAIAYPRPLTLSGGAKQNKAFQPLKLKDTMTGAWHSVSVYLTLDARSN----CWLIESCIVKGE 318
            G    +AA  G +         + D  +   ++ K+  G Q+  +K IY+ LR R  FG E++        +E +N+T + + ++ +              +A   Q+P +   T+  P P LTP  VV S+L+A++ ND PY NHG+EV  RF S +S+    +     +Y   + ++     ++WDAI + +PL  +G     KA Q ++L+   +  W  V+V   L  R+      WL++S ++  +
Sbjct:   30 GLRLRLAASAGPSEARNGTDSADSDFTREFFESVKEREGGQLTEEKDIYNALRERMGFGVEEEFARVRQQRIEGKNVTGDLDASEELLKATLRAMEQNIAENATAGQLPDIKLPTS--PDPALTPGLVVMSILQAMRCNDSPYENHGIEVLTRFTSSASSATDTDEPSFRKYCDFIPKSEYGILLKWDAIRF-KPLEKAG----KKALQKIQLRLADSNEW--VTVKFALSERTTFLGETWLLDSFLIARK 271          
BLAST of mRNA_C-linearis_contig82.16028.1 vs. uniprot
Match: A0A7S3WL80_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WL80_EMIHU)

HSP 1 Score: 65.9 bits (159), Expect = 1.470e-9
Identity = 41/118 (34.75%), Postives = 64/118 (54.24%), Query Frame = 0
Query:  189 TTFLPTPELTPREVVTSVLEAL--KNNDHPYHNHGVEVFMRFLSPSSA--MYGVEMAGVARYLAENRNRAFMRWDAIAYPRPLT-LSGGAKQNKAFQPLKLKDTMTGAWHSVSVYLTL 301
            T   P+  L+PREV+TSV+E+L   N D P   +G EV MRFL+P+ A  +   +  G +RYL +     F++W+   +   +  L+G     +AFQ + L+ + T  W S   +L L
Sbjct:   25 TNLKPSAALSPREVITSVMESLHRSNWDRPTECYGFEVAMRFLAPTHAAKLKKAKPTGFSRYLRQQHRIRFVKWNEYRFEGDVARLTGDDGVEEAFQMISLRSSPTAEWCSARFHLVL 142          
BLAST of mRNA_C-linearis_contig82.16028.1 vs. uniprot
Match: A0A7S0K9M8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0K9M8_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 3.950e-6
Identity = 43/127 (33.86%), Postives = 65/127 (51.18%), Query Frame = 0
Query:  192 LPTPELTPREVVTSVLEALKNNDHPYHNHGVEVFMRFLSPSSAMYGVEMAGVARYLAENRNRAFMRWDAIAYPRPLTLSGGAKQNK--AFQPLKLKDTMTGAWHSVSVYLTLDARSNCWLIESCIVK 316
            +P  ELT  EVVT VLEAL+NND+P  N GVE+   + S +S +  +E A       E    +  +   + +   L       Q+K  AF  ++L D M     SV+  L+  +  +CWLI+S +V+
Sbjct:  243 VPDAELTAGEVVTVVLEALRNNDNPSTNRGVEILFAYSSSASILADLERAPSVEEYGEMLRTSPDQKILLEHVDVLFDKADYSQDKKRAFITVRLMD-MEKTLTSVNFILSTGSSDDCWLIDSHLVR 368          
BLAST of mRNA_C-linearis_contig82.16028.1 vs. uniprot
Match: A0A7S2A8Z1_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A8Z1_TRICV)

HSP 1 Score: 55.8 bits (133), Expect = 4.430e-6
Identity = 43/135 (31.85%), Postives = 65/135 (48.15%), Query Frame = 0
Query:  195 PELTPREVVTSVLEALKNNDHPYHNHGVEVFMRFLSPSSAMY------GVEMAGVARYLAENRNRA-FMRWDAIAYPRPLTLSGGAKQNKAFQPLKLKDTMTGAWHSVSVYLTLDARSN----CWLIESCIVKGE 318
            PELT  EVVT+V+ ALKNN+ P  N+GV+V   + SP SA+       G+     A +L ++  +  F   D +      +      + KAF   +L+    G    VSV   L    N    CWL++S +++ E
Sbjct:    1 PELTAGEVVTTVVAALKNNNDPSPNYGVQVLFGYSSPGSAVMSAVRDEGMTPEEYADFLEDSEYKVLFEHEDCVIDKGDYSFD----RKKAFYNARLR-VGPGPLDFVSVNFILSTNGNEEDDCWLVDSMLIRPE 130          
BLAST of mRNA_C-linearis_contig82.16028.1 vs. uniprot
Match: A0A7S2IBG5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IBG5_9EUKA)

HSP 1 Score: 55.8 bits (133), Expect = 8.980e-6
Identity = 37/129 (28.68%), Postives = 65/129 (50.39%), Query Frame = 0
Query:  193 PTPELTPREVVTSVLEAL--KNNDHPYHNHGVEVFMRFLSPSSAMYGVEMAGVARYLAENRNRAFMRWDAIAYPRPLTLSGGAKQNKAFQPLKLKDTMTGAWHSVS---VYLTLDARSNCWLIESCIVK 316
            P+P L PREV++++L AL   N DHP    G EV +RFL+PS+          A YL++   +  + W    +   +TL G   +++A+Q + ++      W +V    V +     ++ W+I +  V+
Sbjct:   52 PSPALQPREVISTMLNALHRSNFDHPRSRFGCEVALRFLAPSNPASRATPQLFATYLSQTWYQPLLDWAEYRWEGDITLLG---ESEAYQQIGVRSAPDEPWVAVRWILVRVPFYGTTDQWMIGAVFVE 177          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig82.16028.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FII9_ECTSI8.720e-14871.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7R9YD20_9STRA1.140e-1326.69Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S3WL80_EMIHU1.470e-934.75Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
A0A7S0K9M8_9STRA3.950e-633.86Hypothetical protein n=1 Tax=Leptocylindrus aporus... [more]
A0A7S2A8Z1_TRICV4.430e-631.85Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2IBG5_9EUKA8.980e-628.68Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..319
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..18
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig82contigC-linearis_contig82:760351..765837 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig82.16028.1mRNA_C-linearis_contig82.16028.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig82 760221..766536 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig82.16028.1 ID=prot_C-linearis_contig82.16028.1|Name=mRNA_C-linearis_contig82.16028.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=320bp
MLRGNVSVHVVLLLVCCVQSSNGFVAFARSGRVSPLSRGCLHKTLACTAD
DLHKREGRGGWRHAGLVRRRSGYPLRATEEGGTEEEEDTLELTKGFYSEI
AARLGKTPGETAKIEVEEDSQQADTDTDKDDSGSQIDKAIYDELRARRDF
GFEQDLGLELEKRNITKEAEVTKIVDAGLDQMPGVSSSTTFLPTPELTPR
EVVTSVLEALKNNDHPYHNHGVEVFMRFLSPSSAMYGVEMAGVARYLAEN
RNRAFMRWDAIAYPRPLTLSGGAKQNKAFQPLKLKDTMTGAWHSVSVYLT
LDARSNCWLIESCIVKGEL*
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