prot_C-linearis_contig82.16026.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig82.16026.1
Unique Nameprot_C-linearis_contig82.16026.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length307
Homology
BLAST of mRNA_C-linearis_contig82.16026.1 vs. uniprot
Match: D7FIH8_ECTSI (Coated vesicle membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH8_ECTSI)

HSP 1 Score: 298 bits (763), Expect = 1.310e-97
Identity = 171/303 (56.44%), Postives = 204/303 (67.33%), Query Frame = 0
Query:    9 MMGRRERSCATR---WFASLQVICGFLALLLALASVESMTMEVDYDQEQCVIVYASKGSTINANYEILGFPL-GTMVILRHKDDGKLLYKREGLADDYISVEATEFGDYELCFINGKTGAIESLRNQDVVSGARMVGLDALRQEKKQELREQPKGKISADDDSFAFSNMQMDDGIWYKGIESASLTDD-GSWYPKDATRKTFGFGLRLGEDVEDIQAMSEVPQEDRNMASFLKEEADVLVQTLSFFNDHESYMRGREELHRENVKQTSTRLMWCTFVEAAVLIWVSWSQLSYIRRFFETKRVL 306
            MMGRR    A R   W   L+V    L  LL   SV SMTM+VD     C IV A +G+TINAN+E+LG+P+  TMVIL+ + D KLLY++E L +DY  V+AT  GDYELCFING    I+SLRN+ V      VGL+ALRQEK                         +D            L+DD  SWY K++  KTFGFGLRLG+DVED+Q+M++V  ED+ MASFL EEAD+LV+TLS FNDHESYMRGREE HRENVKQTS+RLMWCTFVEAAVL+WVSW+QLSYIRRFFETKR+L
Sbjct:    1 MMGRRGGPGAARVARWHGPLRVTSVCLVALLV-TSVNSMTMDVDDGSIACAIVVAKQGNTINANFEVLGYPVKNTMVILQKRGDNKLLYRKEDLGEDYFRVDATNDGDYELCFINGGEERIKSLRNKLVPEVNSFVGLNALRQEKXXXXXXXXXXXXXXXXXXXXXXXELLD-----------GLSDDMPSWYAKESGYKTFGFGLRLGKDVEDLQSMADVSVEDKVMASFLAEEADILVETLSVFNDHESYMRGREEYHRENVKQTSSRLMWCTFVEAAVLVWVSWTQLSYIRRFFETKRIL 291          
BLAST of mRNA_C-linearis_contig82.16026.1 vs. uniprot
Match: A0A7S1YMF7_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1YMF7_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 1.080e-9
Identity = 41/123 (33.33%), Postives = 66/123 (53.66%), Query Frame = 0
Query:  184 IESASLTDDGSWYPKDATRKTFGFGLRLGEDVEDIQAMSEVPQEDRNMASFLKEEADVLVQTLSFFNDHESYMRGREELHRENVKQTSTRLMWCTFVEAAVLIWVSWSQLSYIRRFFETKRVL 306
            I++ ++  D    PKD   +  GF +R+      I+   E   +DR + S L E ++ L++ L    DH+ YMR RE  H      T  R+   TF+EA VL+ +S+ Q+ Y+++FFE +R L
Sbjct:  102 IQNGNMGSDDYVAPKDGIDREVGFAIRVVPPQRGIEG--EAGPDDR-LTSHLIELSEKLMEGLDTMTDHQEYMRERENRHAVLADSTFNRVKEWTFLEAIVLVLISFGQVLYLKKFFEQRRYL 221          
BLAST of mRNA_C-linearis_contig82.16026.1 vs. uniprot
Match: B8C202_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C202_THAPS)

HSP 1 Score: 68.2 bits (165), Expect = 4.450e-9
Identity = 44/123 (35.77%), Postives = 66/123 (53.66%), Query Frame = 0
Query:  184 IESASLTDDGSWYPKDATRKTFGFGLRLGEDVEDIQAMSEVPQEDRNMASFLKEEADVLVQTLSFFNDHESYMRGREELHRENVKQTSTRLMWCTFVEAAVLIWVSWSQLSYIRRFFETKRVL 306
            I++ S  +D     KD   +  GF +R+      +    E   +DR + S L E +D L++ L    DH+ YMRGRE  H      T  R++  T +EA VLI +S+ Q+ Y+++FFETKR L
Sbjct:  103 IQNGSNGNDDFVAAKDGIDREVGFAIRVLPPQRGLDG--EAGPDDR-LTSHLIEMSDKLMEGLHTMADHQEYMRGRENRHSVLADTTFNRIVQWTVLEAVVLILISFGQVLYLKKFFETKRHL 222          
BLAST of mRNA_C-linearis_contig82.16026.1 vs. uniprot
Match: A0A836CQY8_9STRA (Transmembrane emp24 domain-containing protein 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQY8_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 5.410e-9
Identity = 30/68 (44.12%), Postives = 46/68 (67.65%), Query Frame = 0
Query:  239 ADVLVQTLSFFNDHESYMRGREELHRENVKQTSTRLMWCTFVEAAVLIWVSWSQLSYIRRFFETKRVL 306
            ++ LV  L    DH++YMR RE+ HRE +  T+ RL+  T  EA +L+ ++  Q+SYIR+FFE KR++
Sbjct:    5 SEELVNDLYTMVDHQTYMRQREQSHRETIDSTNRRLLLWTIAEALLLVSMAMWQVSYIRQFFEVKRMM 72          
BLAST of mRNA_C-linearis_contig82.16026.1 vs. uniprot
Match: A0A7S1TXQ7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TXQ7_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 4.790e-8
Identity = 47/142 (33.10%), Postives = 71/142 (50.00%), Query Frame = 0
Query:  165 DDSFAFSNMQMDDGIWYKGIESASLTDDGSWYPKDATRKTFGFGLRLGEDVEDIQAMSEVPQEDRNMASFLKEEADVLVQTLSFFNDHESYMRGREELHRENVKQTSTRLMWCTFVEAAVLIWVSWSQLSYIRRFFETKRVL 306
            D SFAF+    D+G +   IE+ +    GS           GF  R   +++    ++    E              ++Q L   +DH+SYMR REELHR+  + T+ R++  T VEA VL  ++  Q+ YIR+FFE KRV+
Sbjct:   87 DGSFAFT--AEDEGDYTLCIENGNKKKAGS--------VEVGFAYRKSAEIKSTTDLAATVME--------------ILQGLQDLSDHQSYMREREELHRDISESTNYRVLVWTLVEAIVLGIMTIWQIMYIRKFFEVKRVV 204          
BLAST of mRNA_C-linearis_contig82.16026.1 vs. uniprot
Match: A0A7S1CB01_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CB01_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.570e-7
Identity = 36/106 (33.96%), Postives = 55/106 (51.89%), Query Frame = 0
Query:  198 KDATRKTFGFGLRLGEDVEDIQAMSEVPQEDRNMASFLKEEADVLVQTLSFFNDHESYMRGREELHRENVKQTSTRLMWCTFVEAAVLIWVSWSQLSYIRRFFETK 303
            K  T+KT  F L  G        ++ V        + L+ E   L   ++   D + YMR RE +HR+  + T++R++W TF+EAAVL+ +S  Q+  I   FETK
Sbjct:   15 KTKTQKTIAFNLHAGASAAGAADLANVGH-----ITPLQREVTQLRDAVTAVQDEQQYMRSREAVHRDTTESTNSRVLWFTFLEAAVLVIMSAWQVWTILGQFETK 115          
BLAST of mRNA_C-linearis_contig82.16026.1 vs. uniprot
Match: A0A7S1CB40_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CB40_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 7.620e-7
Identity = 36/106 (33.96%), Postives = 55/106 (51.89%), Query Frame = 0
Query:  198 KDATRKTFGFGLRLGEDVEDIQAMSEVPQEDRNMASFLKEEADVLVQTLSFFNDHESYMRGREELHRENVKQTSTRLMWCTFVEAAVLIWVSWSQLSYIRRFFETK 303
            K  T+KT  F L  G        ++ V        + L+ E   L   ++   D + YMR RE +HR+  + T++R++W TF+EAAVL+ +S  Q+  I   FETK
Sbjct:  100 KTKTQKTIAFNLHAGASAAGAADLANVGH-----ITPLQREVTQLRDAVTAVQDEQQYMRSREAVHRDTTESTNSRVLWFTFLEAAVLVIMSAWQVWTILGQFETK 200          
BLAST of mRNA_C-linearis_contig82.16026.1 vs. uniprot
Match: A0A4P9VYA0_9FUNG (Supernatant protein factor, C-terminal domain-containing protein n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9VYA0_9FUNG)

HSP 1 Score: 57.8 bits (138), Expect = 2.680e-6
Identity = 27/72 (37.50%), Postives = 45/72 (62.50%), Query Frame = 0
Query:  235 LKEEADVLVQTLSFFNDHESYMRGREELHRENVKQTSTRLMWCTFVEAAVLIWVSWSQLSYIRRFFETKRVL 306
            L+EE   +   +    D ++Y+  RE +HR+  + T++R+ W +  E AVLI V   Q+SY++RFFE KR++
Sbjct:  134 LQEEVRQMADGIRAIRDEQAYLMQREAMHRKTAESTNSRVAWWSLFETAVLIAVCIFQVSYLKRFFEVKRLV 205          
BLAST of mRNA_C-linearis_contig82.16026.1 vs. uniprot
Match: B3S4C9_TRIAD (GOLD domain-containing protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3S4C9_TRIAD)

HSP 1 Score: 56.2 bits (134), Expect = 9.220e-6
Identity = 32/106 (30.19%), Postives = 57/106 (53.77%), Query Frame = 0
Query:  201 TRKTFGFGLRLGEDVEDIQAMSEVPQEDRNMASFLKEEADVLVQTLSFFNDHESYMRGREELHRENVKQTSTRLMWCTFVEAAVLIWVSWSQLSYIRRFFETKRVL 306
            T KT  F L +    +      +   +D N +  L      L  +LS     + YM+ RE +HRE    T++R++W +F E+ +L++++  Q+ Y++RFFE +RV+
Sbjct:  102 TPKTVVFSLEVEVRKDPAAVKDDEKDKDANHSQ-LDSMLTQLSVSLSSVKHEQEYMQIRERIHREINDNTNSRVVWWSFFESLILVFMTLGQVYYLKRFFEVRRVI 206          
BLAST of mRNA_C-linearis_contig82.16026.1 vs. uniprot
Match: A0A177WE87_BATDL (GOLD domain-containing protein n=2 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=A0A177WE87_BATDL)

HSP 1 Score: 55.5 bits (132), Expect = 1.960e-5
Identity = 23/66 (34.85%), Postives = 42/66 (63.64%), Query Frame = 0
Query:  241 VLVQTLSFFNDHESYMRGREELHRENVKQTSTRLMWCTFVEAAVLIWVSWSQLSYIRRFFETKRVL 306
            +L+  + F  D +S++  R+  HRE ++ T  R++W +F +  +++     Q+ Y+RRFFETKRV+
Sbjct:  153 ILMDNIRFMRDEQSFLLKRQNRHRETIQSTHGRVLWWSFGQIVMVLIACGFQVLYLRRFFETKRVV 218          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig82.16026.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7FIH8_ECTSI1.310e-9756.44Coated vesicle membrane protein n=1 Tax=Ectocarpus... [more]
A0A7S1YMF7_9STRA1.080e-933.33Hypothetical protein n=2 Tax=Skeletonema marinoi T... [more]
B8C202_THAPS4.450e-935.77Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A836CQY8_9STRA5.410e-944.12Transmembrane emp24 domain-containing protein 2 n=... [more]
A0A7S1TXQ7_9STRA4.790e-833.10Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1CB01_9STRA1.570e-733.96Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S1CB40_9STRA7.620e-733.96Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A4P9VYA0_9FUNG2.680e-637.50Supernatant protein factor, C-terminal domain-cont... [more]
B3S4C9_TRIAD9.220e-630.19GOLD domain-containing protein n=2 Tax=Trichoplax ... [more]
A0A177WE87_BATDL1.960e-534.85GOLD domain-containing protein n=2 Tax=Batrachochy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009038GOLD domainSMARTSM01190EMP24_GP25L_2coord: 43..301
e-value: 4.2E-17
score: 72.8
IPR009038GOLD domainPFAMPF01105EMP24_GP25Lcoord: 44..301
e-value: 1.6E-17
score: 64.0
IPR015720TMP21-relatedPANTHERPTHR22811TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEINcoord: 31..301
NoneNo IPR availablePANTHERPTHR22811:SF31TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 2coord: 31..301
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 27..38
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 273..296
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 297..306
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 44..272
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..43
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 39..43
NoneNo IPR availableTMHMMTMhelixcoord: 21..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig82contigC-linearis_contig82:737142..742263 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig82.16026.1mRNA_C-linearis_contig82.16026.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig82 737114..742943 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig82.16026.1 ID=prot_C-linearis_contig82.16026.1|Name=mRNA_C-linearis_contig82.16026.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=307bp
MVVELVPAMMGRRERSCATRWFASLQVICGFLALLLALASVESMTMEVDY
DQEQCVIVYASKGSTINANYEILGFPLGTMVILRHKDDGKLLYKREGLAD
DYISVEATEFGDYELCFINGKTGAIESLRNQDVVSGARMVGLDALRQEKK
QELREQPKGKISADDDSFAFSNMQMDDGIWYKGIESASLTDDGSWYPKDA
TRKTFGFGLRLGEDVEDIQAMSEVPQEDRNMASFLKEEADVLVQTLSFFN
DHESYMRGREELHRENVKQTSTRLMWCTFVEAAVLIWVSWSQLSYIRRFF
ETKRVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009038GOLD_dom
IPR015720TMP21-related