prot_C-linearis_contig82.16021.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig82.16021.1
Unique Nameprot_C-linearis_contig82.16021.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1198
Homology
BLAST of mRNA_C-linearis_contig82.16021.1 vs. uniprot
Match: D7FII2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FII2_ECTSI)

HSP 1 Score: 288 bits (737), Expect = 4.990e-79
Identity = 278/657 (42.31%), Postives = 343/657 (52.21%), Query Frame = 0
Query:  573 KITAIPHRHAAAEPAAGVRLEPAVESSGPGAG---HGREERATWGSGVVGSGAHSAPGKSTTRPKGTNSPSGSGALSSRSELCRSSPLSGAGDRVGARGSTFSSVSEEVRPGGQAGGGYVAAMGRRARSRARCEAARRLAAAALAAKRARPSTPISERARWGKGREGQQEDAAALARRKLEATSPA-MLPADPRQIRA-------SNLEHNSPGCDADLRTGAHEGKAPRVVDARTNHDRARCHSPVDSRADG--PRVPLVRSARSPAASHNGQGRGGQGIDSVGRATGVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLLASIARLDTLLGEEEGGDACAQASCKTSDSPSGGGVGVRTDPLVLKSGREMERKPVRAPAGGIAKSRVRSGGGKETKTCSSLGMAPAMVAKFGPSHGVSEPAVSGVANAHAASAVPSSPGMFPPLFSRLPPCPSERRGRGRYAPPEADGMLTSSPSTEAATFRAPASHVP--------GTRHDAGHEQRWTGRRDDGPGEAMPAQHHRPHNNQSREAVMTRRVGGSSSRGGGIARDSSRAR--------RQEEWAQRTPCSPGPHRDARHG-DSAGGWHGYNGGGHEYYGQRV-AATDPRDVCWDVRAGRGGFAGESHPEDQTAYGRCRGG 1198
            ++ A  +R+A A       LE   E+SG G G   +G E+R  WGSG V SGAHSAPG ++ R +  ++P+G GAL+S S   R+SPLS   DRVG  GS FSS S E   G Q GGGYVAAMGRRARS ARCEAARRLAAA +AA R RPSTPISERARWGKG+E  QE+A  LARRK  A + + MLPADPR +RA       +  + +S   DAD   G  +GK P  ++A   HD  R  + +DSR     P +     A SP +S              G   GVGG                  XXXXXXX       RL ASIARLDTLL E +G     + S + SD+P  GG G  T     KSG  +ER+PVRAP GGIAK+RVR G  KE    SS G    +  K G     +   V   A   A +A+ +SPG+FPP+F R+P      R  GRY PP+A    ++ PS   A +R PASH P          R+ A  EQR   R D GP +A P  +              RR  G++SR  G   D   AR        R+E    +TPCSP  +R   +  D+  GWH ++ GG  Y    + AA DPRD    V   R  + GES PE+   YG  RGG
Sbjct:  203 RLQADANRYAVAAAPVVCALESPAETSGFGDGRNQNGSEKRVVWGSGTVASGAHSAPGTTSARSRRRDAPAG-GALTSSSAY-RASPLSSTADRVGTGGSVFSSASGETNLGRQFGGGYVAAMGRRARSMARCEAARRLAAA-MAADRGRPSTPISERARWGKGKES-QEEAMELARRKCAAANTSTMLPADPRHVRAGATSASSTAFQKDSTPYDADTSMGGCQGKVPSAIEANFTHDTTRPEA-IDSRHKDKPPCLAPGSKANSPVSSRR----------CDGLRVGVGGGDGGLHRRQKAKRQIAKSXXXXXXXE------RLTASIARLDTLLREGDG-----EVSGRASDAPMPGGSGGVTPSS--KSGGRVERRPVRAPVGGIAKTRVRRGATKEIT--SSAGPVVNVEPKAGLVSVAAAVPVHTTAVVDAGAAIMASPGLFPPIFGRVPAHTGGGREIGRYEPPDAVQQTSNGPSRGVA-YREPASHCPIGRAASPLSYRYCADDEQRRAKRADGGPVDAAPGHY----------CQEGRRPAGAASRWVGDGNDHYDARAPPRYPDQREELRVPQTPCSPARYRGVDNSYDNHRGWHDHSRGGSYYRRDDLRAAIDPRDAPGVVDHAR--WIGESRPEE---YGDDRGG 813          
BLAST of mRNA_C-linearis_contig82.16021.1 vs. uniprot
Match: A0A6H5J8B5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8B5_9PHAE)

HSP 1 Score: 267 bits (683), Expect = 1.730e-69
Identity = 269/642 (41.90%), Postives = 331/642 (51.56%), Query Frame = 0
Query:  592 LEPAVESSGPGAG---HGREERATWGSGVVGSGAHSAPGKSTTRPKGTNSPSGSGALSSRSELCRSSPLSGAGDRVGARGSTFSSVSEEVRPGGQAGGGYVAAMGRRARSRARCEAARRLAAAALAAKRARPSTPISERARWGKGREGQ-----------------------QEDAAALARRK-LEATSPAMLPADPRQIRASNL-------EHNSPGCDADLRTGAHEGKAPRVVDARTNHDRARCHSPVDSRADGPRVPLVRSARSPAASHNGQGRGGQGIDSVGRATGVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLLASIARLDTLLGEEEGGDACAQASCKTSDSPSGGGVGVRTDPLVLKSGREMERKPVRAPAGGIAKSRVRSGGGKETKTCSSLGMAPAMVAKFGPSHGVSEPAVSGVANAHAASAVPSSPGMFPPLFSRLPPCPSERRGRGRYAPPEADGMLTSSPSTEAATFRAPASHVPGTR--------HDAGHEQRWTGRRDDGPGEAMPAQHHRPHNNQSREAVMTRRVGGSSSRGGGIARDSSR--ARRQEEWAQRTPCSPGPHRDARHGD-SAGGWHGYNGGGHEYYGQRV-AATDPRDVCWDVRAGRGGFAGESHPE 1187
            LE   E+SG G G   +G E+RA WGSG+V SGAHSAPG ++ R +  ++P+G GAL+S S   R+SPLS   D VG  GS FSS S E  PG Q GGGYVAAMGRRARS ARCEAARRLAAA +AA R RPSTPISERARWGKG+E Q                       +E+A  LARRK L A +  MLPADPR +RA          + NS   DAD   G  +GK P  ++A   HD  R  +      D P  P +    +P +  N        + S     GVGG                 XXXXXXXXX      RL ASIARLDTLL E +G     +AS + S++P  GG G  T     KS   +ER P RAP GGIAK+RVR+G  K     SS G    +  + G     +   V   A A A +A+ +SPG+FP +F R+P      R  GRY PP+A        S+    +R PASH P +R        + A  EQR   R D GP +A P  H+R    +S  AV +R VG  + R    AR   R  A+R+E W  +TPCSP  +R     D +  GWH +  G   Y    + AA DPRD    V   R  + GES PE
Sbjct:  941 LESPAETSGFGDGRNQNGSEKRAVWGSGIVASGAHSAPGTTSARSRRRDAPAG-GALTSSSAY-RASPLSSTADHVGTGGSVFSSASGETNPGRQCGGGYVAAMGRRARSMARCEAARRLAAA-MAADRGRPSTPISERARWGKGKESQVEVERRKLLQRRAEYAEELQKKAKEEAMELARRKCLAANASTMLPADPRHVRAGATSATSTVYQQNSTLYDADKSIGGCQGKVPSAIEANFTHDITRPEAIDGRHQDKP--PCL----APGSKVNSP------VSSRRCDVGVGGDDGGLHRRQKAKRQIAKXXXXXXXXX------RLTASIARLDTLLREGDG-----EASRRASNAPMPGGSGGVTR---SKSRGRVERSPARAPVGGIAKTRVRTGATKGIT--SSAGPLVNVEPQAGSVSVAAAVPVHETAVADAGAAIMASPGLFPQIFDRVPAHTGGGREMGRYEPPDAVQQAPYG-SSRGGAYREPASHCPVSRAASPLSYRYCADDEQRRPKRTDGGPIDAAPG-HYRQEGRRSAGAV-SRWVGDGNDRYHYDARAPPRYPAQREERWVPQTPCSPTRYRGVDSSDDNHRGWHDHCRGRSYYRRDDLRAAIDPRDAPGVVDHAR--WIGESRPE 1546          
BLAST of mRNA_C-linearis_contig82.16021.1 vs. uniprot
Match: D7FII1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FII1_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 1.260e-8
Identity = 34/52 (65.38%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    1 RWANLPPELRAIKDRWLGESSEEIGPLSAANGIDVSACAVASPPTRTDKQDQ 52
            RWANLPPELRAIKDRWLG SSEEI P +A + I VSA A  + P     QDQ
Sbjct:  258 RWANLPPELRAIKDRWLGSSSEEITPQAATSDITVSAGATITAPAHGGWQDQ 309          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig82.16021.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FII2_ECTSI4.990e-7942.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J8B5_9PHAE1.730e-6941.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FII1_ECTSI1.260e-865.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig82contigC-linearis_contig82:700336..705512 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig82.16021.1mRNA_C-linearis_contig82.16021.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig82 700336..705512 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig82.16021.1 ID=prot_C-linearis_contig82.16021.1|Name=mRNA_C-linearis_contig82.16021.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1198bp
RWANLPPELRAIKDRWLGESSEEIGPLSAANGIDVSACAVASPPTRTDKQ
DQQYGENGEYDVRAPAGPNHLKMQEERSETGRSENDSSLEGLYTSVGEPT
FNYAEGSGARGKGVLPSETTCKEEEEEEEEERPGRLGSTCTYTLQGEQLQ
EADGHKVRHQHPSPDAAATAAHPDFRRSRPGRDASYPQPGEGPQSKTSRT
RGERAGELEQKTTVTGTHEEIGVPLAPAFGGALEAQEDTHRREKVRNHLR
ALRNRLPHSTTGGISPSVSPALLQGDRKSVPSSQEENRAGARVQPPSAVR
AQIDVGKDGDGQGRNRQSSDDRRGASGGDRTRQRKARQEEAVYPVIVNEA
SGRTAGGKQQLGGAYPENDERAGVGIKLQNVATVRDDVAVVAEGAPVGCA
GIKSTNESTTTASRPPELFDSLDLSASPPHNGSVLATAIPAAAKPAPTTV
AVTYPQATPQDVKDLESTEPPNRAVVTTAAPTLAVPPPTAPQGRPPDKGA
PLEAIRAVPRSQTNQASEGTPTKLWLPERALKSPPTAPPKAAKAKPSEKS
DSKNLEAPNVSRLRAPGWGRETKITAIPHRHAAAEPAAGVRLEPAVESSG
PGAGHGREERATWGSGVVGSGAHSAPGKSTTRPKGTNSPSGSGALSSRSE
LCRSSPLSGAGDRVGARGSTFSSVSEEVRPGGQAGGGYVAAMGRRARSRA
RCEAARRLAAAALAAKRARPSTPISERARWGKGREGQQEDAAALARRKLE
ATSPAMLPADPRQIRASNLEHNSPGCDADLRTGAHEGKAPRVVDARTNHD
RARCHSPVDSRADGPRVPLVRSARSPAASHNGQGRGGQGIDSVGRATGVG
GGGGERGVARRQQKPERQAASNRQSTTVEEQEERLLASIARLDTLLGEEE
GGDACAQASCKTSDSPSGGGVGVRTDPLVLKSGREMERKPVRAPAGGIAK
SRVRSGGGKETKTCSSLGMAPAMVAKFGPSHGVSEPAVSGVANAHAASAV
PSSPGMFPPLFSRLPPCPSERRGRGRYAPPEADGMLTSSPSTEAATFRAP
ASHVPGTRHDAGHEQRWTGRRDDGPGEAMPAQHHRPHNNQSREAVMTRRV
GGSSSRGGGIARDSSRARRQEEWAQRTPCSPGPHRDARHGDSAGGWHGYN
GGGHEYYGQRVAATDPRDVCWDVRAGRGGFAGESHPEDQTAYGRCRGG
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