prot_C-linearis_contig82.16006.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig82.16006.1
Unique Name	prot_C-linearis_contig82.16006.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	158

Homology

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BLAST of mRNA_C-linearis_contig82.16006.1 vs. uniprot
Match: D7G9D3_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9D3_ECTSI)

HSP 1 Score: 291 bits (744), Expect = 3.100e-99
Identity = 143/151 (94.70%), Postives = 147/151 (97.35%), Query Frame = 0

Query:    2 ASGGDVTRRLQQELMGIMMGADPGASAFPNDDNLFEWTATLSGSEDTAYEGLTYKLKLVFPETYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAQLWADQDKYRQVCKQKYIKYQEG 152
            ++GGDVTRRLQQELMGIMMGADPGASAFPNDDNLFEWTATL GSEDTAYEGLTYKLKLVFP+TYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNN+SPLNTEAAQLWADQDKYRQVCKQKY   QEG
Sbjct:    3 SAGGDVTRRLQQELMGIMMGADPGASAFPNDDNLFEWTATLCGSEDTAYEGLTYKLKLVFPDTYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNESPLNTEAAQLWADQDKYRQVCKQKY---QEG 150

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BLAST of mRNA_C-linearis_contig82.16006.1 vs. uniprot
Match: I1HED7_BRADI (UBC core domain-containing protein n=11 Tax=Pooideae TaxID=147368 RepID=I1HED7_BRADI)

HSP 1 Score: 202 bits (513), Expect = 1.170e-63
Identity = 92/145 (63.45%), Postives = 114/145 (78.62%), Query Frame = 0

Query:    2 ASGGDVTRRLQQELMGIMMGADPGASAFPNDDNLFEWTATLSGSEDTAYEGLTYKLKLVFPETYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAQLWADQDKYRQVCKQKY 146
            A G  V RRLQ ELM +MMG DPG SAFP  DN+F+W  T+ GS  TAYEG +Y+L L FP  YPYK P + FETPCFHPNVD HGNICLDIL++KWSSA+ V TIL S++SLL +PNNDSPLNT+AA LWA+Q+++R++ ++ Y
Sbjct:   34 ADGQSVVRRLQSELMALMMGGDPGVSAFPEGDNIFQWVGTIDGSAATAYEGTSYRLALSFPSDYPYKPPKVKFETPCFHPNVDTHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQAAALWANQEEFRKMVEKLY 178

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BLAST of mRNA_C-linearis_contig82.16006.1 vs. uniprot
Match: A0A2R5GGQ9_9STRA (Ubiquitin-conjugating enzyme E2 C n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GGQ9_9STRA)

HSP 1 Score: 200 bits (509), Expect = 2.180e-63
Identity = 95/145 (65.52%), Postives = 115/145 (79.31%), Query Frame = 0

Query:    2 ASGGDVTRRLQQELMGIMMGADPGASAFPNDDNLFEWTATLSGSEDTAYEGLTYKLKLVFPETYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAQLWADQDKYRQVCKQKY 146
            ASG  VT+RLQQELM +M   D  A+AFP+ DNLF W+  ++G+ +T YEGL+YKL + FP  YPY AP I F TPCFHPNVD HGNICLDILKEKWS+ +SVSTIL SLRSLL+DPNNDSPLN  AAQLW +Q++Y++V  +KY
Sbjct:    7 ASGESVTKRLQQELMQLMRDGDSNATAFPDGDNLFSWSGNINGAPETVYEGLSYKLHIDFPSNYPYTAPTIRFVTPCFHPNVDAHGNICLDILKEKWSATYSVSTILTSLRSLLSDPNNDSPLNGVAAQLWDNQEEYKRVLLKKY 151

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BLAST of mRNA_C-linearis_contig82.16006.1 vs. uniprot
Match: A2ZRP5_ORYSJ (Os01g0273100 protein n=11 Tax=Oryzeae TaxID=147380 RepID=A2ZRP5_ORYSJ)

HSP 1 Score: 201 bits (512), Expect = 2.290e-63
Identity = 92/145 (63.45%), Postives = 113/145 (77.93%), Query Frame = 0

Query:    2 ASGGDVTRRLQQELMGIMMGADPGASAFPNDDNLFEWTATLSGSEDTAYEGLTYKLKLVFPETYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAQLWADQDKYRQVCKQKY 146
            A G  V RRLQ ELM +MMG DPG SAFP  DN+F W  T++GS  TAYEG +Y+L L FP  YPYK P + FETPCFHPNVD HGNICLDIL++KWSSA+ V TIL S++SLL +PNNDSPLNT+AA LW +QD++R++ ++ Y
Sbjct:   43 AEGQSVVRRLQSELMALMMGGDPGVSAFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYKPPKVRFETPCFHPNVDAHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQAAALWPNQDEFRKMVEKLY 187

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BLAST of mRNA_C-linearis_contig82.16006.1 vs. uniprot
Match: K3XMD9_SETIT (UBC core domain-containing protein n=21 Tax=Panicoideae TaxID=147369 RepID=K3XMD9_SETIT)

HSP 1 Score: 198 bits (504), Expect = 2.820e-62
Identity = 90/145 (62.07%), Postives = 114/145 (78.62%), Query Frame = 0

Query:    2 ASGGDVTRRLQQELMGIMMGADPGASAFPNDDNLFEWTATLSGSEDTAYEGLTYKLKLVFPETYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAQLWADQDKYRQVCKQKY 146
            A G  V RRLQ ELM +MMG DPG SAFP+ DN+F W  T++GS  TAYEG +Y+L L F   YPYK P + F+TPCFHPNVD HGNICLDIL++KWSSA+ V TIL S++SLL +PNNDSPLNT+AA LWA+Q+++R++ ++ Y
Sbjct:   34 AEGQSVVRRLQSELMALMMGGDPGVSAFPDGDNIFNWVGTIAGSAGTAYEGTSYRLALAFTAEYPYKPPKVRFDTPCFHPNVDTHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQAAALWANQEEFRKMVEKLY 178

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BLAST of mRNA_C-linearis_contig82.16006.1 vs. uniprot
Match: A0A0D9UZJ3_9ORYZ (UBC core domain-containing protein n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9UZJ3_9ORYZ)

HSP 1 Score: 198 bits (503), Expect = 6.480e-62
Identity = 90/140 (64.29%), Postives = 111/140 (79.29%), Query Frame = 0

Query:    7 VTRRLQQELMGIMMGADPGASAFPNDDNLFEWTATLSGSEDTAYEGLTYKLKLVFPETYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAQLWADQDKYRQVCKQKY 146
            V RRLQ ELM +MMG DPG SAFP  DN+F+W  T++GS  TAYEG +Y+L L FP  YPYK P + FETPCFHPNVD HGNICLDIL++KWSSA+ V TIL S++SLL +PNN+SPLNT+AA LW DQD++R++  + Y
Sbjct:   53 VMRRLQSELMSLMMGGDPGISAFPEGDNIFQWVGTIAGSAATAYEGTSYRLSLAFPGEYPYKPPKVRFETPCFHPNVDAHGNICLDILQDKWSSAYDVRTILLSVQSLLGEPNNESPLNTQAAALWPDQDEFRKMVHKLY 192

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BLAST of mRNA_C-linearis_contig82.16006.1 vs. uniprot
Match: A0A059LRK7_9CHLO (Ubiquitin-conjugating enzyme n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LRK7_9CHLO)

HSP 1 Score: 196 bits (499), Expect = 1.340e-61
Identity = 90/128 (70.31%), Postives = 105/128 (82.03%), Query Frame = 0

Query:    7 VTRRLQQELMGIMMGADPGASAFPNDDNLFEWTATLSGSEDTAYEGLTYKLKLVFPETYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAQLWAD 134
            VTRRLQQEL  +MM  D   SAFP  D+LF WT T++G+E TAYEGLTY+L L FP  YP+KAP + FET CFHPNVD HGNICLDILKEKWS+A+SV T+LQS++SLLADPNNDSPLNT AA+LW +
Sbjct:   29 VTRRLQQELTSVMMNGDRSVSAFPQGDSLFSWTGTITGAEGTAYEGLTYRLSLAFPSDYPFKAPTVRFETKCFHPNVDLHGNICLDILKEKWSAAYSVLTVLQSIQSLLADPNNDSPLNTHAARLWVE 156

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BLAST of mRNA_C-linearis_contig82.16006.1 vs. uniprot
Match: A0A5J4Y1P3_9CHLO (Ubiquitin-conjugating enzyme E2 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y1P3_9CHLO)

HSP 1 Score: 196 bits (497), Expect = 2.530e-61
Identity = 87/145 (60.00%), Postives = 115/145 (79.31%), Query Frame = 0

Query:    7 VTRRLQQELMGIMMGADPGASAFPNDDNLFEWTATLSGSEDTAYEGLTYKLKLVFPETYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAQLWADQDKYRQVCKQKYIKYQE 151
            VT+RLQ ELM +M   DPG SAFP+ D+LF W  T+ G+ DT YEG++YKL L FP  YP+KAP + FETPCFHPN+D++GNICLDILK+KWS+A+SV T+L S++SLL +PNNDSPLN+ AA+LW  Q+ Y++V  +KY + Q+
Sbjct:   30 VTKRLQSELMSLMSATDPGVSAFPDGDSLFSWVGTIQGAADTVYEGMSYKLSLKFPTDYPFKAPTVKFETPCFHPNIDQYGNICLDILKDKWSAAYSVRTVLLSIQSLLGEPNNDSPLNSYAAKLWESQEDYKRVLIKKYAEAQK 174

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BLAST of mRNA_C-linearis_contig82.16006.1 vs. uniprot
Match: I0YU55_COCSC (Ubiquitinating enzyme n=2 Tax=Coccomyxa TaxID=41891 RepID=I0YU55_COCSC)

HSP 1 Score: 195 bits (496), Expect = 3.950e-61
Identity = 90/145 (62.07%), Postives = 116/145 (80.00%), Query Frame = 0

Query:    7 VTRRLQQELMGIMMGADPGASAFPNDDNLFEWTATLSGSEDTAYEGLTYKLKLVFPETYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAQLWADQDKYRQVCKQKYIKYQE 151
            VT+RLQ ELM +M  ADPG SAFP+ D+LF W  T+ G++ T YEGL+YKL L FP  YP+KAPL+ FET CFHPNVD++GNICLDILK+KWS+A+SV T+L S++SLL +PNNDSPLN  AA+LW +Q +YR+V  +KY + Q+
Sbjct:   33 VTKRLQSELMSLMASADPGVSAFPDGDSLFAWLGTIHGAKGTVYEGLSYKLSLKFPTDYPFKAPLVKFETACFHPNVDQYGNICLDILKDKWSAAYSVRTVLLSIQSLLGEPNNDSPLNAYAAKLWENQVEYRRVLHKKYAELQK 177

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BLAST of mRNA_C-linearis_contig82.16006.1 vs. uniprot
Match: C3YEG7_BRAFL (UBC core domain-containing protein n=3 Tax=Branchiostoma TaxID=7737 RepID=C3YEG7_BRAFL)

HSP 1 Score: 195 bits (496), Expect = 4.490e-61
Identity = 91/142 (64.08%), Postives = 110/142 (77.46%), Query Frame = 0

Query:    7 VTRRLQQELMGIMMGADPGASAFPNDDNLFEWTATLSGSEDTAYEGLTYKLKLVFPETYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAQLWADQDKYRQVCKQKYIK 148
            V+RRLQQELMG+MM  D G SAFP+ D+LF WT TL+G   T YEGL YKL L FP+ YPYK P + FETPCFHPNVDEHGNICLDILKEKWS+ + V T+L S++SLL +PNNDSPLN  AA LW +Q +Y++   ++Y K
Sbjct:   32 VSRRLQQELMGLMMSDDKGISAFPSGDSLFNWTGTLTGPLGTVYEGLQYKLSLEFPQGYPYKPPTVRFETPCFHPNVDEHGNICLDILKEKWSALYDVRTVLLSIQSLLGEPNNDSPLNVHAAGLWENQTEYKKTLLERYEK 173

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig82.16006.1 vs. uniprot

BLAST of mRNA_C-linearis_contig82.16006.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G9D3_ECTSI	3.100e-99	94.70	UBC core domain-containing protein n=2 Tax=Ectocar...	[more]
I1HED7_BRADI	1.170e-63	63.45	UBC core domain-containing protein n=11 Tax=Pooide...	[more]
A0A2R5GGQ9_9STRA	2.180e-63	65.52	Ubiquitin-conjugating enzyme E2 C n=1 Tax=Hondaea ...	[more]
A2ZRP5_ORYSJ	2.290e-63	63.45	Os01g0273100 protein n=11 Tax=Oryzeae TaxID=147380...	[more]
K3XMD9_SETIT	2.820e-62	62.07	UBC core domain-containing protein n=21 Tax=Panico...	[more]
A0A0D9UZJ3_9ORYZ	6.480e-62	64.29	UBC core domain-containing protein n=1 Tax=Leersia...	[more]
A0A059LRK7_9CHLO	1.340e-61	70.31	Ubiquitin-conjugating enzyme n=1 Tax=Helicosporidi...	[more]
A0A5J4Y1P3_9CHLO	2.530e-61	60.00	Ubiquitin-conjugating enzyme E2 n=1 Tax=Trebouxia ...	[more]
I0YU55_COCSC	3.950e-61	62.07	Ubiquitinating enzyme n=2 Tax=Coccomyxa TaxID=4189...	[more]
C3YEG7_BRAFL	4.490e-61	64.08	UBC core domain-containing protein n=3 Tax=Branchi...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 9..151 e-value: 5.6E-58 score: 208.6
None	No IPR available	PANTHER	PTHR24068:SF223		coord: 2..143
None	No IPR available	PANTHER	PTHR24068	FAMILY NOT NAMED	coord: 2..143
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 10..143 e-value: 2.1E-43 score: 147.3
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBIQUITIN_CONJUGAT_2	coord: 9..141 score: 35.985
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10		coord: 3..152 e-value: 4.4E-58 score: 197.2
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 7..151
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBIQUITIN_CONJUGAT_1	coord: 79..94

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig82	contig	C-linearis_contig82:462288..465477 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig82.16006.1	mRNA_C-linearis_contig82.16006.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig82 461143..465597 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig82.16006.1 ID=prot_C-linearis_contig82.16006.1|Name=mRNA_C-linearis_contig82.16006.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=158bp
MASGGDVTRRLQQELMGIMMGADPGASAFPNDDNLFEWTATLSGSEDTAY
EGLTYKLKLVFPETYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSS
AFSVSTILQSLRSLLADPNNDSPLNTEAAQLWADQDKYRQVCKQKYIKYQ
EGQAASK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000608	UBQ-conjugat_E2
IPR016135	UBQ-conjugating_enzyme/RWD
IPR023313	UBQ-conjugating_AS