mRNA_C-linearis_contig82.16006.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig82.16006.1
Unique NamemRNA_C-linearis_contig82.16006.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig82.16006.1 vs. uniprot
Match: D7G9D3_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9D3_ECTSI)

HSP 1 Score: 291 bits (745), Expect = 3.670e-93
Identity = 143/151 (94.70%), Postives = 147/151 (97.35%), Query Frame = 1 
Query:  124 ASGGDVTRRLQQELMGIMMGADPGASAFPNDDNLFEWTATLSGSEDTAYEGLTYKLKLVFPETYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAQLWADQDKYRQVCKQKYIKYQEG 576
            ++GGDVTRRLQQELMGIMMGADPGASAFPNDDNLFEWTATL GSEDTAYEGLTYKLKLVFP+TYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNN+SPLNTEAAQLWADQDKYRQVCKQKY   QEG
Sbjct:    3 SAGGDVTRRLQQELMGIMMGADPGASAFPNDDNLFEWTATLCGSEDTAYEGLTYKLKLVFPDTYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNESPLNTEAAQLWADQDKYRQVCKQKY---QEG 150
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BLAST of mRNA_C-linearis_contig82.16006.1 vs. uniprot
Match: A0A2R5GGQ9_9STRA (Ubiquitin-conjugating enzyme E2 C n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GGQ9_9STRA)

HSP 1 Score: 203 bits (516), Expect = 4.470e-59
Identity = 96/147 (65.31%), Postives = 117/147 (79.59%), Query Frame = 1 
Query:  118 TMASGGDVTRRLQQELMGIMMGADPGASAFPNDDNLFEWTATLSGSEDTAYEGLTYKLKLVFPETYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAQLWADQDKYRQVCKQKY 558
            T+ASG  VT+RLQQELM +M   D  A+AFP+ DNLF W+  ++G+ +T YEGL+YKL + FP  YPY AP I F TPCFHPNVD HGNICLDILKEKWS+ +SVSTIL SLRSLL+DPNNDSPLN  AAQLW +Q++Y++V  +KY
Sbjct:    5 TIASGESVTKRLQQELMQLMRDGDSNATAFPDGDNLFSWSGNINGAPETVYEGLSYKLHIDFPSNYPYTAPTIRFVTPCFHPNVDAHGNICLDILKEKWSATYSVSTILTSLRSLLSDPNNDSPLNGVAAQLWDNQEEYKRVLLKKY 151
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BLAST of mRNA_C-linearis_contig82.16006.1 vs. uniprot
Match: I1HED7_BRADI (UBC core domain-containing protein n=11 Tax=Pooideae TaxID=147368 RepID=I1HED7_BRADI)

HSP 1 Score: 202 bits (514), Expect = 1.920e-58
Identity = 92/145 (63.45%), Postives = 114/145 (78.62%), Query Frame = 1 
Query:  124 ASGGDVTRRLQQELMGIMMGADPGASAFPNDDNLFEWTATLSGSEDTAYEGLTYKLKLVFPETYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAQLWADQDKYRQVCKQKY 558
            A G  V RRLQ ELM +MMG DPG SAFP  DN+F+W  T+ GS  TAYEG +Y+L L FP  YPYK P + FETPCFHPNVD HGNICLDIL++KWSSA+ V TIL S++SLL +PNNDSPLNT+AA LWA+Q+++R++ ++ Y
Sbjct:   34 ADGQSVVRRLQSELMALMMGGDPGVSAFPEGDNIFQWVGTIDGSAATAYEGTSYRLALSFPSDYPYKPPKVKFETPCFHPNVDTHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQAAALWANQEEFRKMVEKLY 178
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BLAST of mRNA_C-linearis_contig82.16006.1 vs. uniprot
Match: A2ZRP5_ORYSJ (Os01g0273100 protein n=11 Tax=Oryzeae TaxID=147380 RepID=A2ZRP5_ORYSJ)

HSP 1 Score: 202 bits (513), Expect = 3.710e-58
Identity = 92/145 (63.45%), Postives = 113/145 (77.93%), Query Frame = 1 
Query:  124 ASGGDVTRRLQQELMGIMMGADPGASAFPNDDNLFEWTATLSGSEDTAYEGLTYKLKLVFPETYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAQLWADQDKYRQVCKQKY 558
            A G  V RRLQ ELM +MMG DPG SAFP  DN+F W  T++GS  TAYEG +Y+L L FP  YPYK P + FETPCFHPNVD HGNICLDIL++KWSSA+ V TIL S++SLL +PNNDSPLNT+AA LW +QD++R++ ++ Y
Sbjct:   43 AEGQSVVRRLQSELMALMMGGDPGVSAFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYKPPKVRFETPCFHPNVDAHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQAAALWPNQDEFRKMVEKLY 187
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BLAST of mRNA_C-linearis_contig82.16006.1 vs. uniprot
Match: K3XMD9_SETIT (UBC core domain-containing protein n=21 Tax=Panicoideae TaxID=147369 RepID=K3XMD9_SETIT)

HSP 1 Score: 199 bits (505), Expect = 4.130e-57
Identity = 90/145 (62.07%), Postives = 114/145 (78.62%), Query Frame = 1 
Query:  124 ASGGDVTRRLQQELMGIMMGADPGASAFPNDDNLFEWTATLSGSEDTAYEGLTYKLKLVFPETYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAQLWADQDKYRQVCKQKY 558
            A G  V RRLQ ELM +MMG DPG SAFP+ DN+F W  T++GS  TAYEG +Y+L L F   YPYK P + F+TPCFHPNVD HGNICLDIL++KWSSA+ V TIL S++SLL +PNNDSPLNT+AA LWA+Q+++R++ ++ Y
Sbjct:   34 AEGQSVVRRLQSELMALMMGGDPGVSAFPDGDNIFNWVGTIAGSAGTAYEGTSYRLALAFTAEYPYKPPKVRFDTPCFHPNVDTHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQAAALWANQEEFRKMVEKLY 178
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BLAST of mRNA_C-linearis_contig82.16006.1 vs. uniprot
Match: A0A0D9UZJ3_9ORYZ (UBC core domain-containing protein n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9UZJ3_9ORYZ)

HSP 1 Score: 198 bits (504), Expect = 9.380e-57
Identity = 90/140 (64.29%), Postives = 111/140 (79.29%), Query Frame = 1 
Query:  139 VTRRLQQELMGIMMGADPGASAFPNDDNLFEWTATLSGSEDTAYEGLTYKLKLVFPETYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAQLWADQDKYRQVCKQKY 558
            V RRLQ ELM +MMG DPG SAFP  DN+F+W  T++GS  TAYEG +Y+L L FP  YPYK P + FETPCFHPNVD HGNICLDIL++KWSSA+ V TIL S++SLL +PNN+SPLNT+AA LW DQD++R++  + Y
Sbjct:   53 VMRRLQSELMSLMMGGDPGISAFPEGDNIFQWVGTIAGSAATAYEGTSYRLSLAFPGEYPYKPPKVRFETPCFHPNVDAHGNICLDILQDKWSSAYDVRTILLSVQSLLGEPNNESPLNTQAAALWPDQDEFRKMVHKLY 192
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BLAST of mRNA_C-linearis_contig82.16006.1 vs. uniprot
Match: A0A059LRK7_9CHLO (Ubiquitin-conjugating enzyme n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LRK7_9CHLO)

HSP 1 Score: 197 bits (500), Expect = 1.840e-56
Identity = 90/128 (70.31%), Postives = 105/128 (82.03%), Query Frame = 1 
Query:  139 VTRRLQQELMGIMMGADPGASAFPNDDNLFEWTATLSGSEDTAYEGLTYKLKLVFPETYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAQLWAD 522
            VTRRLQQEL  +MM  D   SAFP  D+LF WT T++G+E TAYEGLTY+L L FP  YP+KAP + FET CFHPNVD HGNICLDILKEKWS+A+SV T+LQS++SLLADPNNDSPLNT AA+LW +
Sbjct:   29 VTRRLQQELTSVMMNGDRSVSAFPQGDSLFSWTGTITGAEGTAYEGLTYRLSLAFPSDYPFKAPTVRFETKCFHPNVDLHGNICLDILKEKWSAAYSVLTVLQSIQSLLADPNNDSPLNTHAARLWVE 156
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BLAST of mRNA_C-linearis_contig82.16006.1 vs. uniprot
Match: A0A5J4Y1P3_9CHLO (Ubiquitin-conjugating enzyme E2 n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y1P3_9CHLO)

HSP 1 Score: 196 bits (498), Expect = 3.380e-56
Identity = 87/145 (60.00%), Postives = 115/145 (79.31%), Query Frame = 1 
Query:  139 VTRRLQQELMGIMMGADPGASAFPNDDNLFEWTATLSGSEDTAYEGLTYKLKLVFPETYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAQLWADQDKYRQVCKQKYIKYQE 573
            VT+RLQ ELM +M   DPG SAFP+ D+LF W  T+ G+ DT YEG++YKL L FP  YP+KAP + FETPCFHPN+D++GNICLDILK+KWS+A+SV T+L S++SLL +PNNDSPLN+ AA+LW  Q+ Y++V  +KY + Q+
Sbjct:   30 VTKRLQSELMSLMSATDPGVSAFPDGDSLFSWVGTIQGAADTVYEGMSYKLSLKFPTDYPFKAPTVKFETPCFHPNIDQYGNICLDILKDKWSAAYSVRTVLLSIQSLLGEPNNDSPLNSYAAKLWESQEDYKRVLIKKYAEAQK 174
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BLAST of mRNA_C-linearis_contig82.16006.1 vs. uniprot
Match: I0YU55_COCSC (Ubiquitinating enzyme n=2 Tax=Coccomyxa TaxID=41891 RepID=I0YU55_COCSC)

HSP 1 Score: 196 bits (497), Expect = 5.220e-56
Identity = 90/145 (62.07%), Postives = 116/145 (80.00%), Query Frame = 1 
Query:  139 VTRRLQQELMGIMMGADPGASAFPNDDNLFEWTATLSGSEDTAYEGLTYKLKLVFPETYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAQLWADQDKYRQVCKQKYIKYQE 573
            VT+RLQ ELM +M  ADPG SAFP+ D+LF W  T+ G++ T YEGL+YKL L FP  YP+KAPL+ FET CFHPNVD++GNICLDILK+KWS+A+SV T+L S++SLL +PNNDSPLN  AA+LW +Q +YR+V  +KY + Q+
Sbjct:   33 VTKRLQSELMSLMASADPGVSAFPDGDSLFAWLGTIHGAKGTVYEGLSYKLSLKFPTDYPFKAPLVKFETACFHPNVDQYGNICLDILKDKWSAAYSVRTVLLSIQSLLGEPNNDSPLNAYAAKLWENQVEYRRVLHKKYAELQK 177
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BLAST of mRNA_C-linearis_contig82.16006.1 vs. uniprot
Match: C3YEG7_BRAFL (UBC core domain-containing protein n=3 Tax=Branchiostoma TaxID=7737 RepID=C3YEG7_BRAFL)

HSP 1 Score: 196 bits (497), Expect = 5.940e-56
Identity = 91/142 (64.08%), Postives = 110/142 (77.46%), Query Frame = 1 
Query:  139 VTRRLQQELMGIMMGADPGASAFPNDDNLFEWTATLSGSEDTAYEGLTYKLKLVFPETYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSSAFSVSTILQSLRSLLADPNNDSPLNTEAAQLWADQDKYRQVCKQKYIK 564
            V+RRLQQELMG+MM  D G SAFP+ D+LF WT TL+G   T YEGL YKL L FP+ YPYK P + FETPCFHPNVDEHGNICLDILKEKWS+ + V T+L S++SLL +PNNDSPLN  AA LW +Q +Y++   ++Y K
Sbjct:   32 VSRRLQQELMGLMMSDDKGISAFPSGDSLFNWTGTLTGPLGTVYEGLQYKLSLEFPQGYPYKPPTVRFETPCFHPNVDEHGNICLDILKEKWSALYDVRTVLLSIQSLLGEPNNDSPLNVHAAGLWENQTEYKKTLLERYEK 173
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig82.16006.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9D3_ECTSI3.670e-9394.70UBC core domain-containing protein n=2 Tax=Ectocar... [more]
A0A2R5GGQ9_9STRA4.470e-5965.31Ubiquitin-conjugating enzyme E2 C n=1 Tax=Hondaea ... [more]
I1HED7_BRADI1.920e-5863.45UBC core domain-containing protein n=11 Tax=Pooide... [more]
A2ZRP5_ORYSJ3.710e-5863.45Os01g0273100 protein n=11 Tax=Oryzeae TaxID=147380... [more]
K3XMD9_SETIT4.130e-5762.07UBC core domain-containing protein n=21 Tax=Panico... [more]
A0A0D9UZJ3_9ORYZ9.380e-5764.29UBC core domain-containing protein n=1 Tax=Leersia... [more]
A0A059LRK7_9CHLO1.840e-5670.31Ubiquitin-conjugating enzyme n=1 Tax=Helicosporidi... [more]
A0A5J4Y1P3_9CHLO3.380e-5660.00Ubiquitin-conjugating enzyme E2 n=1 Tax=Trebouxia ... [more]
I0YU55_COCSC5.220e-5662.07Ubiquitinating enzyme n=2 Tax=Coccomyxa TaxID=4189... [more]
C3YEG7_BRAFL5.940e-5664.08UBC core domain-containing protein n=3 Tax=Branchi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig82contigC-linearis_contig82:461143..465597 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score293.9
Seed ortholog evalue4.5e-77
Seed eggNOG ortholog2880.D7G9D3
Preferred nameUBE2C
KEGG koko:K06674,ko:K06688,ko:K08707
KEGG Pathwayko04111,ko04120,map04111,map04120
Hectar predicted targeting categoryother localisation
GOsGO:0000151,GO:0000152,GO:0000209,GO:0000278,GO:0000280,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005680,GO:0005737,GO:0005829,GO:0005886,GO:0006464,GO:0006508,GO:0006511,GO:0006513,GO:0006807,GO:0006996,GO:0007049,GO:0007088,GO:0007096,GO:0007346,GO:0008150,GO:0008152,GO:0008283,GO:0009056,GO:0009057,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010458,GO:0010498,GO:0010564,GO:0010604,GO:0010638,GO:0010948,GO:0010965,GO:0010992,GO:0010994,GO:0016020,GO:0016043,GO:0016567,GO:0016740,GO:0019222,GO:0019538,GO:0019725,GO:0019787,GO:0019899,GO:0019941,GO:0022402,GO:0022607,GO:0030071,GO:0030163,GO:0031145,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031396,GO:0031398,GO:0031399,GO:0031401,GO:0031461,GO:0031536,GO:0031625,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032436,GO:0032446,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034622,GO:0036211,GO:0042176,GO:0042592,GO:0043085,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043632,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044770,GO:0044772,GO:0045732,GO:0045786,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045930,GO:0045931,GO:0048285,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051258,GO:0051338,GO:0051347,GO:0051438,GO:0051443,GO:0051603,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0060255,GO:0061630,GO:0061631,GO:0061650,GO:0061659,GO:0062033,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070647,GO:0070936,GO:0070979,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090068,GO:0090231,GO:0090233,GO:0090266,GO:0140014,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901976,GO:1901977,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902426,GO:1902494,GO:1903047,GO:1903052,GO:1903320,GO:1903322,GO:1903362,GO:1903364,GO:1903504,GO:1904666,GO:1904668,GO:1905818,GO:1905820,GO:1990234,GO:2001252
EggNOG free text desc.protein modification by small protein conjugation
EggNOG OGsCOG5078@1,KOG0421@2759
Ec32 ortholog descriptionUbiquitin-conjugating enzyme E2
Ec32 orthologEc-28_000490.1
EC2.3.2.23
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036,ko04121
Exons4
Model size1739
Cds size474
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig82.16006.1prot_C-linearis_contig82.16006.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig82 462288..465477 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930613.0208507-UTR-C-linearis_contig82:461142..4622871622930613.0208507-UTR-C-linearis_contig82:461142..462287Chordaria linearis ClinC8C monoicousUTRC-linearis_contig82 461143..462287 -
1690881159.6624-UTR-C-linearis_contig82:461142..4622871690881159.6624-UTR-C-linearis_contig82:461142..462287Chordaria linearis ClinC8C monoicousUTRC-linearis_contig82 461143..462287 -
1622930613.1610346-UTR-C-linearis_contig82:465477..4655971622930613.1610346-UTR-C-linearis_contig82:465477..465597Chordaria linearis ClinC8C monoicousUTRC-linearis_contig82 465478..465597 -
1690881159.7250285-UTR-C-linearis_contig82:465477..4655971690881159.7250285-UTR-C-linearis_contig82:465477..465597Chordaria linearis ClinC8C monoicousUTRC-linearis_contig82 465478..465597 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930613.0468805-CDS-C-linearis_contig82:462287..4624121622930613.0468805-CDS-C-linearis_contig82:462287..462412Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 462288..462412 -
1690881159.6769745-CDS-C-linearis_contig82:462287..4624121690881159.6769745-CDS-C-linearis_contig82:462287..462412Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 462288..462412 -
1622930613.0972772-CDS-C-linearis_contig82:462821..4630231622930613.0972772-CDS-C-linearis_contig82:462821..463023Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 462822..463023 -
1690881159.6873145-CDS-C-linearis_contig82:462821..4630231690881159.6873145-CDS-C-linearis_contig82:462821..463023Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 462822..463023 -
1622930613.1166792-CDS-C-linearis_contig82:463315..4634331622930613.1166792-CDS-C-linearis_contig82:463315..463433Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 463316..463433 -
1690881159.6977267-CDS-C-linearis_contig82:463315..4634331690881159.6977267-CDS-C-linearis_contig82:463315..463433Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 463316..463433 -
1622930613.1383712-CDS-C-linearis_contig82:465448..4654771622930613.1383712-CDS-C-linearis_contig82:465448..465477Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 465449..465477 -
1690881159.7126164-CDS-C-linearis_contig82:465448..4654771690881159.7126164-CDS-C-linearis_contig82:465448..465477Chordaria linearis ClinC8C monoicousCDSC-linearis_contig82 465449..465477 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig82.16006.1

>prot_C-linearis_contig82.16006.1 ID=prot_C-linearis_contig82.16006.1|Name=mRNA_C-linearis_contig82.16006.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=158bp
MASGGDVTRRLQQELMGIMMGADPGASAFPNDDNLFEWTATLSGSEDTAY
EGLTYKLKLVFPETYPYKAPLITFETPCFHPNVDEHGNICLDILKEKWSS
AFSVSTILQSLRSLLADPNNDSPLNTEAAQLWADQDKYRQVCKQKYIKYQ
EGQAASK*
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mRNA from alignment at C-linearis_contig82:461143..465597-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig82.16006.1 ID=mRNA_C-linearis_contig82.16006.1|Name=mRNA_C-linearis_contig82.16006.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4455bp|location=Sequence derived from alignment at C-linearis_contig82:461143..465597- (Chordaria linearis ClinC8C monoicous)
GCTGCACAACGCCTACCTAAATAAATAGACAGAGCGAGCCAAGAGCTAGA
CACAGGGTGCTTGCTGGATAGCGGGGAGCTAGAAAACGCAGCGGTACACA
GCAAACTCTTCTAGAGCACAATGGCGTCCGGCGGAGATGTTACGCGCAGG
TGGGATGGATTTATGAGAAGGTTGGTTGGCCGGTATCTCTCGCGCCGGTC
GCGCACGAAAGGAGGAGTGCGCGAGGCCGATAGCATCCACCACTAGCATC
AATATCTTGCTAGGTGGGGTGGACAGGGAGGTGGAGGTACTTTCTTGCAT
ATCCATTCCAAGCAGTTAGAGAAAAGAGCGCGAGAAAAGGGGATTCCTGA
ACGATTTTTTGGCGCCAACCACGCGCGCATCATCTCTCCTCCCCACCATC
CTGTATTCGACGCGCGCACCTGCCAAGCGAGATAGAGAGAGGTAGAGAGA
AAGGAAGAAGGCCACAATCCTCCTGGTGCTGGTCGGATTCCTGGCTGCTG
CCCTTCCGACTCTGCCCCTTTCCAAGCACGATGTGTGTGTGCCATCTTGG
GGTTGCGGAAGAACTACTGTCGAATTCTCGCGCTTCTTTGCCTCTCGTAG
ACGGTCGGACGCCGAATATCAGGGAGCCGTATCGCGGTACACCGGCTTAC
GGTGATGGACGCTAGCCTCCAGAAAGATTTTGATACTAAATCCTTTATAA
TAAGGGCGAGAAAACACCAAAAGCGCGTAGCGTGTTAGGAGTCCCGGTTC
CGTGTATGGTATCAGTAGAGGACACCATGGAGAAGGTGTGAGACGTGTTC
GCATGTCTGCTGCTGGGGCGGAGTTATCGAGAGTCGCAGCAGTAGGTCAA
AACTCCGCAAATCTGGGCCGACGATAGCAGACATCGACTGCCGTACTCGC
TACCACAGACACCAACATCGTGAAATGCGGGTCCACAACAGTAGCTCCTA
CCACTAGCTACTGCTGAGGGCCCGTAGATGAGGAGGTTCAGGTATGTGGC
GGCGAGCACAGCAGTCCGAGTTTGCTGTCGTCGGCCCGGATTTGCAGAGT
TTTGACCTACTGCTGCGACTCTCGATATCTCCGCCCCAGCGGCAGATATA
AGCATGCGAACATGTCTCACACCTTCTCCATGGTGTCCTCTACTGATATC
ATACACGGAACCGAAACTCCTAATAACCCACAACTTGTCTGGATGCCCGC
AATGTTGCCTGTTTTGTCTTGTTTTTTGAATAGGCGAAAAAACTTGATTT
CAGAATAGGCGGTTGGAGGTAGACCACGTAATATGTATGTAAAGACCAGC
CCCGTTCGCCGCTGGGTGAGCGAATCAACACGTCTCTTCTTGCGTAACCC
TTCCCTATTGATCTGGTGGATCTGCTGTGTGGTTGATGTGTGCTGATTCG
ATTATTTTCAAAATCGCTAATTCTCAAAGGAGGTTGCGTCCATCCCCTTC
ACACCCTTCTCGAAATGTGGCGTGCCATCAAAGTATCGGCGTCGTCGTAC
GAACATTACGTTAGATTCGAGAAAGTGAAGCTGAGAATTAAGGGAAATCC
TAACCAGCCAAGGCGGCGCGCCCGGCAGCGTACAGCACCACTGGTTGCAC
ATGAGTCGCCGGCGAAAATGCTCGCTTTGTGGCTCACCCAATCAAGAAAA
CGAGGCACAAGAATTGGCCGAATCGTTCTCGATCGAAACCGCTGCTCTCT
AGCCTCTATTGTGGGTCGACGATTTATGCTTCGATGGCGCACAGCTACAG
CAGTCTTTCAGACACGACAACAGAGGATTTGTGAAGATACTTCTCCATGT
TTGCGATGTCGAAGGATACAGAGTGTCCATCCCCGCGGATCGCCTGAACC
CCGCACGCCTGTAAACACCGCCGGAGCCTGCCTGCCTTGATAACAGCAGT
AGTGCATAGCCTCAAAAGCGTTTGCTGTCGGTTTCCCCCATCCATATTAT
ACCCATCTCAAGCTCGGGCTTTCCCCGCGGTGCGCATTCCGCACGGCCTT
CATGATGCAGCAGCAGCCTACGGGCACCGCACCTCGCTCGGTATTCGATG
GCACCTGATGAGACCCTCAGACATCCATCTGATGCATACCCCCAGGAAAC
TCGTTACAATATCCAGCTTCCCGCTCACGGCTGCCCGGAAACCGCCGCAT
TTTATCCCACTCAGGCTGCAGCAGGAGCTGATGGGCATCATGATGGGCGC
GGACCCCGGGGCTTCGGCCTTTCCGAACGACGACAACCTCTTCGAGTGGA
CGGCAACATTAAGCGGGAGTGAAGACACAGCGGTGAGAAAAAAAGACAGA
GAGAGAAAGAGAGAGAGAGAGACAGCACGAAACCTTCTGCCACGCGCGAG
CCTGGCTTGCCATCAGCGAAGCACTTCACTCCTCCACTCCGTTTCTATCC
TCGATACCCCGACCGCCATGCCTCTGGCTGGCCCGGTGAACGCCCGATGT
TGGAGCTCCATCCTGCAAAAAAAAGACTGTTCATGATGTGGTTTAAAACC
ACATGTACGACCCCATGAATCAATTATTGAAGTCAGTACACCCCCCCGAT
GCAAAACTAAAACAAAAAAAACAGTACGAAGGGTTGACGTACAAGCTGAA
GCTGGTGTTCCCGGAGACGTACCCGTACAAGGCTCCGCTCATCACGTTCG
AGACGCCGTGCTTCCACCCCAACGTGGACGAGCACGGGAACATCTGCCTC
GACATCCTCAAGGAGAAGTGGTCCTCGGCCTTCAGCGTCAGCACCATCCT
GCAGTCCCTCCGGTCTTTGCTTGCCGGTGAGTGGGGGTGTTGGCGTCGTC
GTTTGAAGGGGCCGCTTTTTTCTGCGCAGGGGTTGGTCTTGTTTGTTGTG
GGGCGTTTTTTGTGTCTGATCGCCGTGCAGTGCATTGATTGCGCCGTTGT
TGCGCCTGGTTTTTCGGAGACCGCATTTACCGTGCGAGTTTCCTGTGTTG
TTGTGTTCGTAGAAATTGAAATTGTCGCCCAATAAGTTTTTTCTCGCACG
TTTTTTCCGGTGTCTGCTGTGGCCCAGGCATTCCGTTTTGTGTGTTTGCT
TTTATATGGCCCTCCACTCCGGGCTTTGGCGAGCGAGCGAGCATCTTGAC
GCGCTCCTCGCCTTGTGAAGTCGTCCCATCTCATGCCTGCCACCTTTTCC
CGTTGATGTTACAACGTTCCTTCCCCGGCGCACAGACCCAAACAACGACA
GCCCTCTCAACACCGAGGCGGCGCAGCTGTGGGCGGACCAAGACAAGTAC
CGACAAGTGTGCAAGCAGAAGTATATCAAGTATCAGGAGGGCCAAGCGGC
GTCAAAGTAGTCCATGTAGTCTCGTAATTTCTCCGCGTCTTTACTTGTTG
TACTCTAGTTTAGTTTTTGGGGGAGGCGAAGGGTGGCATGGCAGGCCGTG
TGAAGTTTGCACTACACAGACCTTTTTTTACGCTACAAATCCATTGGTTT
GTCCTCTGCTGCTGCATGTGGTTGGGGCGCTATCTTTCTTGTGGTGCCGT
AATTTGCAGTTGAATCATGTTTAGGCACATCGATAAAGCCGCCGTGCACT
CTCTTTCTCTCTCTCTCTCTCTCTTCTCTCTCTCTCGCTGCACAAGCATA
ATGCAGTGCAGTTCGACCTATTTTCTACGGTATTAGGTTGCCATGCCAGG
GTATTCGTTGGGTGTCGTCGATGTGTCCGTGTGAAAGTACAGTTGGGTGC
CGTGTGGGGGTGGCCAGGGGTAACGAATGGTCTCGTCCTGTCTCTCTTCT
ACAGCTGGTTGCCCAGCCTGATTGAAGTGAAGGTGCGGGCGTTACGCATG
ACGGTATTTGCCAGGTGCGCGGGCACGGTGGTTCATGTGGGGGCTGAAAA
TGGTACATCATACCCGTCAAAATATGACAAGCACGTGGGTGGGATTTGGA
AACCATTTGGGAATTAGTTGTCATAAACACGTGCGTGTTCGGAGTACCAT
GTCTACATAGGATCTCCGAGTTTTTTTCGTCGATTGGGGCCAACGTTTGA
TGGGTTCTGGGCATACAGGTGTACTGCTGCGGCCTATGGCGGATGGTTTA
CCTTGACGACCTTTGCACAGTCTCGGTCTGGCGGTACCTCTCGGCAACCT
ACCAAGGTGATTTGAATGACGGGCCATGCTGTGTTTTCTCTATTCAACAA
GGTGCTTGGGTTTTCTTCTACGATTGCTTGAAGTTATAAGGTACAGGACG
GGCTGAGTTGTCCTGCTACTCCGCAGCCTATGATAGCCGCTTTTGCTGGC
GGAGGCTCTGGGGTCTCGTGGGCCCAGACATTGCCCACTTCTGTACAACC
CTGTACCAGCTTGTTAAAGTTAGCTGTATCTGTTTCGTATGCACAAGCGT
ACATGTACGTGGTTGTGGGGTCGATCGACTAAAGCATCAAGCAAGCCTGT
CGCAGGCAATAAGAAGTAAACACGATACTGGTACTTCGCAATTTTTCAAA
GAGTG
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Coding sequence (CDS) from alignment at C-linearis_contig82:461143..465597-

>mRNA_C-linearis_contig82.16006.1 ID=mRNA_C-linearis_contig82.16006.1|Name=mRNA_C-linearis_contig82.16006.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=948bp|location=Sequence derived from alignment at C-linearis_contig82:461143..465597- (Chordaria linearis ClinC8C monoicous)
ATGGCGTCCGGCGGAGATGTTACGCGCAGATGGCGTCCGGCGGAGATGTT
ACGCGCAGGCTGCAGCAGGAGCTGATGGGCATCATGATGGGCGCGGACCC
CGGGGCTTCGGCCTTTCCGAACGACGACAACCTCTTCGAGTGGACGGCAA
CATTAAGCGGGAGTGAAGACACAGCGGCTGCAGCAGGAGCTGATGGGCAT
CATGATGGGCGCGGACCCCGGGGCTTCGGCCTTTCCGAACGACGACAACC
TCTTCGAGTGGACGGCAACATTAAGCGGGAGTGAAGACACAGCGTACGAA
GGGTTGACGTACAAGCTGAAGCTGGTGTTCCCGGAGACGTACCCGTACAA
GGCTCCGCTCATCACGTTCGAGACGCCGTGCTTCCACCCCAACGTGGACG
AGCACGGGAACATCTGCCTCGACATCCTCAAGGAGAAGTGGTCCTCGGCC
TTCAGCGTCAGCACCATCCTGCAGTCCCTCCGGTCTTTGCTTGCCGTACG
AAGGGTTGACGTACAAGCTGAAGCTGGTGTTCCCGGAGACGTACCCGTAC
AAGGCTCCGCTCATCACGTTCGAGACGCCGTGCTTCCACCCCAACGTGGA
CGAGCACGGGAACATCTGCCTCGACATCCTCAAGGAGAAGTGGTCCTCGG
CCTTCAGCGTCAGCACCATCCTGCAGTCCCTCCGGTCTTTGCTTGCCGAC
CCAAACAACGACAGCCCTCTCAACACCGAGGCGGCGCAGCTGTGGGCGGA
CCAAGACAAGTACCGACAAGTGTGCAAGCAGAAGTATATCAAGTATCAGG
AGGGCCAAGCGGCGTCAAAGTAGACCCAAACAACGACAGCCCTCTCAACA
CCGAGGCGGCGCAGCTGTGGGCGGACCAAGACAAGTACCGACAAGTGTGC
AAGCAGAAGTATATCAAGTATCAGGAGGGCCAAGCGGCGTCAAAGTAG
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