prot_C-linearis_contig82.15989.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig82.15989.1
Unique Nameprot_C-linearis_contig82.15989.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length107
Homology
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BLAST of mRNA_C-linearis_contig82.15989.1 vs. uniprot
Match: Q8QKW0_ESV1K (EsV-1-47 n=2 Tax=root TaxID=1 RepID=Q8QKW0_ESV1K)

HSP 1 Score: 81.6 bits (200), Expect = 5.900e-18
Identity = 43/104 (41.35%), Postives = 60/104 (57.69%), Query Frame = 0 
Query:    4 STVRDIDNKFTSRLTRPEKMNG-RPVNPFAATSSQTPKSSFFEDLLKPEVTTTSELGVVYQGNVVDTKFEQAISFDRYTISASPKAGYKLHSTGRMDVEHTREK 106
            S V +I+  F  RL     +   RPVNPFA+T  QT ++   E  ++  VT    LG  Y+G V DTK + ++  D YTI+ +PK    +HST R+ VEHTRE+
Sbjct:    3 SAVHEINTAFNQRLKPVTGLGAARPVNPFASTGVQTSRTKRDEMTVRSSVTLPGTLGAQYKGKVFDTKNDDSVRLDTYTIAENPKRNITMHSTSRLKVEHTRER 106
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig82.15989.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Q8QKW0_ESV1K5.900e-1841.35EsV-1-47 n=2 Tax=root TaxID=1 RepID=Q8QKW0_ESV1K[more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig82contigC-linearis_contig82:320013..320333 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig82.15989.1mRNA_C-linearis_contig82.15989.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig82 320013..320333 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig82.15989.1 ID=prot_C-linearis_contig82.15989.1|Name=mRNA_C-linearis_contig82.15989.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=107bp
MAWSTVRDIDNKFTSRLTRPEKMNGRPVNPFAATSSQTPKSSFFEDLLKP
EVTTTSELGVVYQGNVVDTKFEQAISFDRYTISASPKAGYKLHSTGRMDV
EHTREK*
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