prot_C-linearis_contig81.15963.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig81.15963.1
Unique Nameprot_C-linearis_contig81.15963.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length95
Homology
BLAST of mRNA_C-linearis_contig81.15963.1 vs. uniprot
Match: A0A6H5JAT0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAT0_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 1.150e-22
Identity = 44/77 (57.14%), Postives = 59/77 (76.62%), Query Frame = 0
Query:    2 GRVHFYKAAKAPDASTCEYHLKKIEELNPVAGKKMGAVPRPTWAMHATRGNVVWDQVTSNMSESTNHAMGAETRAKP 78
            GR+HFY+AA+APD +TCE+HL KI++LN  A +K+ +  R  WA++ATRGNVV DQV SNM+ES NHA+G +    P
Sbjct:  311 GRMHFYQAARAPDKATCEFHLNKIKDLNTAAYEKVASASREKWAVYATRGNVVRDQVNSNMAESLNHALGPDVLPAP 387          
BLAST of mRNA_C-linearis_contig81.15963.1 vs. uniprot
Match: A0A6H5JN60_9PHAE (SWIM-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN60_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 2.780e-22
Identity = 49/89 (55.06%), Postives = 61/89 (68.54%), Query Frame = 0
Query:    7 YKAAKAPDASTCEYHLKKIEELNPVAGKKMGAVPRPTWAMHATRGNVVWDQVTSNMSESTNHAMGAETRAKPVLDLVQDIVMQSAAKVA 95
            Y+AA+A D +TCE ++ KI  LNP AGK +   PR  WAM+ATRGNVV DQVTSNMSE+ N+ MG +TR+K  LD   D   Q   K+A
Sbjct:    2 YEAARATDKATCEANIDKIAALNPAAGKYIRLQPRHEWAMYATRGNVVQDQVTSNMSETANNMMGPDTRSKAPLDFFMDTAFQGLDKLA 90          
BLAST of mRNA_C-linearis_contig81.15963.1 vs. uniprot
Match: A0A6H5KPK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPK8_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 8.100e-17
Identity = 38/67 (56.72%), Postives = 50/67 (74.63%), Query Frame = 0
Query:    7 YKAAKAPDASTCEYHLKKIEELNPVAGKKMGAVPRPTWAMHATRGNVVWDQVTSNMSESTNHAMGAE 73
            Y+AA+A D +TCE ++ KI  LNP AG+ +   PR  WAM+ATRGNVV DQVTSNMSE+ N+ +G +
Sbjct:    2 YEAARATDKATCEANIDKIAALNPAAGEYIRLQPRHEWAMYATRGNVVQDQVTSNMSETANNMIGPD 68          
BLAST of mRNA_C-linearis_contig81.15963.1 vs. uniprot
Match: A0A6H5KFP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP9_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 1.050e-16
Identity = 39/67 (58.21%), Postives = 49/67 (73.13%), Query Frame = 0
Query:    7 YKAAKAPDASTCEYHLKKIEELNPVAGKKMGAVPRPTWAMHATRGNVVWDQVTSNMSESTNHAMGAE 73
            Y+AA+A D +TCE ++ KI  LNP AGK +    R  WAM+ATRGNVV DQVTSNMSE+ N+ MG +
Sbjct:    2 YEAARATDKATCEANIDKIAALNPAAGKYIRLQTRHEWAMYATRGNVVQDQVTSNMSETANNMMGPD 68          
BLAST of mRNA_C-linearis_contig81.15963.1 vs. uniprot
Match: A0A6H5JA84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA84_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 1.940e-15
Identity = 34/70 (48.57%), Postives = 47/70 (67.14%), Query Frame = 0
Query:   22 LKKIEELNPVAGKKMGAVPRPTWAMHATRGNVVWDQVTSNMSESTNHAMGAETRAKPVLDLVQDIVMQSA 91
            + +++ LNP A KK+   P  TWA +A + NV+WDQ TSN SES N  +G ETR+K VL  + DIV+ +A
Sbjct:    1 MNEVQNLNPAAFKKLNDTPHNTWANYACKNNVIWDQTTSNFSESLNKLIGEETRSKSVLGFMHDIVLLTA 70          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig81.15963.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JAT0_9PHAE1.150e-2257.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN60_9PHAE2.780e-2255.06SWIM-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5KPK8_9PHAE8.100e-1756.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFP9_9PHAE1.050e-1658.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JA84_9PHAE1.940e-1548.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig81contigC-linearis_contig81:621468..622337 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig81.15963.1mRNA_C-linearis_contig81.15963.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig81 621467..622337 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig81.15963.1 ID=prot_C-linearis_contig81.15963.1|Name=mRNA_C-linearis_contig81.15963.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=95bp
DGRVHFYKAAKAPDASTCEYHLKKIEELNPVAGKKMGAVPRPTWAMHATR
GNVVWDQVTSNMSESTNHAMGAETRAKPVLDLVQDIVMQSAAKVA
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