prot_C-linearis_contig81.15960.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig81.15960.1
Unique Nameprot_C-linearis_contig81.15960.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length178
Homology
BLAST of mRNA_C-linearis_contig81.15960.1 vs. uniprot
Match: A0A6H5J557_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J557_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 1.320e-30
Identity = 72/133 (54.14%), Postives = 95/133 (71.43%), Query Frame = 0
Query:    1 MNGAGGSSSRADVKKLKHELNSDKKKAKTAKADGEIRRRAFDAMAAPHVESKTSVALGASVQGLTEAVVSKELLDQEEAKRRRWKANVEAKEKKLAMWERRGKEESPAALALEQELEDLYDNPVAAPLAVVTP 133
            MNGAGG  SRA++K L HE+N++ KK K A+AD  ++RRA +A++ P  +SK+S+ L  SV+ LT AVVSKELLDQE+A+R RW   V A E KLA+W + GK  +  A AL++EL   YDNPV APL+V  P
Sbjct:  361 MNGAGGKHSRAEMKTLAHEVNAENKKLKGAEADAVLKRRALEALSTPPEDSKSSLELVESVKALTRAVVSKELLDQEQAERARWNERVRAMESKLALWGKMGKGSTAEAQALQEELLHAYDNPVVAPLSVAAP 493          
BLAST of mRNA_C-linearis_contig81.15960.1 vs. uniprot
Match: A0A6H5KSZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ3_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 3.680e-29
Identity = 71/132 (53.79%), Postives = 94/132 (71.21%), Query Frame = 0
Query:    2 NGAGGSSSRADVKKLKHELNSDKKKAKTAKADGEIRRRAFDAMAAPHVESKTSVALGASVQGLTEAVVSKELLDQEEAKRRRWKANVEAKEKKLAMWERRGKEESPAALALEQELEDLYDNPVAAPLAVVTP 133
            NGAGG  SRA++K L H +N++ KK K+A+ D  + RRAF+A++AP  +SK++  L  SV+ LT AVVSKELLDQ+ A+R RWK NV A EKKL ++E+RGK  +P A  LE+ L  +YD PV APL V  P
Sbjct:  220 NGAGGKHSRAEMKALAHGVNAENKKLKSAETDAALERRAFEALSAPPEDSKSTKELVESVKALTRAVVSKELLDQDAAERARWKENVGAMEKKLELYEKRGKGNTPEAQDLEKALLAMYDAPVVAPLPVAAP 351          
BLAST of mRNA_C-linearis_contig81.15960.1 vs. uniprot
Match: A0A6H5K3L7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3L7_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 2.100e-5
Identity = 36/68 (52.94%), Postives = 46/68 (67.65%), Query Frame = 0
Query:   66 EAVVSKELLDQEEAKRRRWKANVEAKEKKLAMWERRGKEESPAALALEQELEDLYDNPVAAPLAVVTP 133
            EAVV+K  L++EEA  +R    ++ KE+KL +WE+RGKE +   LALE ELE LYDNP   P A V P
Sbjct:  365 EAVVAKGRLNEEEAAGQRHMQTIDGKERKLKLWEKRGKE-AEDYLALEAELEYLYDNP---PCAAVEP 428          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig81.15960.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5J557_9PHAE1.320e-3054.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSZ3_9PHAE3.680e-2953.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3L7_9PHAE2.100e-552.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 13..33
NoneNo IPR availableCOILSCoilCoilcoord: 74..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig81contigC-linearis_contig81:544696..545229 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig81.15960.1mRNA_C-linearis_contig81.15960.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig81 544696..545229 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig81.15960.1 ID=prot_C-linearis_contig81.15960.1|Name=mRNA_C-linearis_contig81.15960.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=178bp
MNGAGGSSSRADVKKLKHELNSDKKKAKTAKADGEIRRRAFDAMAAPHVE
SKTSVALGASVQGLTEAVVSKELLDQEEAKRRRWKANVEAKEKKLAMWER
RGKEESPAALALEQELEDLYDNPVAAPLAVVTPPPPGTPSSATPNLARGG
GEGIAAGGGGGGARCGWSSKRGHCRSGR
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