prot_C-linearis_contig81.15954.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig81.15954.1
Unique Nameprot_C-linearis_contig81.15954.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length193
Homology
BLAST of mRNA_C-linearis_contig81.15954.1 vs. uniprot
Match: D8LMA2_ECTSI (COX4 neighbour n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA2_ECTSI)

HSP 1 Score: 286 bits (733), Expect = 2.140e-96
Identity = 144/192 (75.00%), Postives = 165/192 (85.94%), Query Frame = 0
Query:    1 MSSGGVSVEGPAYVKMMLHAAKYPWAAVNGFLLGEGGSPAGQICVKDAVPLFHTSTLAPLLETSASMIDAHAASVGLSIVGFYQANQCLDDNAPGTLSSKIMDKIDVARDGSSVLLVVSNKRLEIAGDSAVSAYGRDANNSFRKHLEVAVSGETIQAFESALAQRVEAKVVDIDEHLDDVSKDWRNPGIASA 192
            MSS  V+VE  AY+K+MLHAAKYPWAAVNGFLLGE G   GQ+ VKDAVPLFHTSTLAPLLETSA M+DAHAA  GL IVGFYQANQCLDDNAPG L++++M+KID    G SVL+V+SNKRLE AGDSAVSAYGRD+NNSFRKH+EV V+ E ++AFESALA + E ++VD+DEHLDDV KDWRNPGIASA
Sbjct:    1 MSSFNVNVEEAAYLKLMLHAAKYPWAAVNGFLLGEEGL-TGQVSVKDAVPLFHTSTLAPLLETSAVMVDAHAARSGLCIVGFYQANQCLDDNAPGALATEVMNKIDSTHAGPSVLVVISNKRLETAGDSAVSAYGRDSNNSFRKHVEVEVAAEAVKAFESALADKTEGRLVDMDEHLDDVQKDWRNPGIASA 191          
BLAST of mRNA_C-linearis_contig81.15954.1 vs. uniprot
Match: A0A835YUA8_9STRA (COX4 neighbour n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUA8_9STRA)

HSP 1 Score: 124 bits (310), Expect = 2.950e-32
Identity = 72/189 (38.10%), Postives = 109/189 (57.67%), Query Frame = 0
Query:    5 GVSVEGPAYVKMMLHAAKYPWAAVNGFLLGEGGSPAGQICVKDAVPLFHTSTLAPLLETSASMIDAHAASVGLSIVGFYQANQCLDDN-APGTLSSKIMDKIDVARDGSSVLLVVSNKRLEIAGDSAVSAYGRDANNSFRKHLEVAVSGETIQAFESALAQRVEAKVVDIDEHLDDVSKDWRNPGIASA 192
            G  VE  AY K+MLH+A++P   V G LLG       +  VKDAVPLFH   L P+LE ++S++DA+     L +VG Y A    +D   P T   ++  K+       +VLL  ++K+L+ A + A+ A+ RD+  ++R+ LE++V   ++ AF   L       V D+D+HLDDV+KDWRN  + +A
Sbjct:    3 GAEVEPKAYCKLMLHSAQHPSCDVLGVLLGSQDD--SRTVVKDAVPLFHLPVLTPMLEVASSLVDAYVRESDLKMVGTYYATATPEDMPGPPTHLPRVATKLCEKLGDRAVLLQQNHKKLDAAQEHALLAFERDSGGNYRRALELSVDSASVTAFNGLLLANSVPFVRDMDDHLDDVTKDWRNKTLEAA 189          
BLAST of mRNA_C-linearis_contig81.15954.1 vs. uniprot
Match: UPI000A2A7D06 (ER membrane protein complex subunit 8 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A7D06)

HSP 1 Score: 123 bits (308), Expect = 6.940e-32
Identity = 73/187 (39.04%), Postives = 108/187 (57.75%), Query Frame = 0
Query:    8 VEGPAYVKMMLHAAKYPWAAVNGFLLGEGGSPAGQICVKDAVPLFHTST-LAPLLETSASMIDAHAASVGLSIVGFYQANQCLDDNAPGTLSSKIMDKI-DVARDGSSVLLVVSNKRLEIAGDS-AVSAYGRDANN--SFRKHLEVAVSGETIQAFESALAQRVEAKVVDIDEHLDDVSKDWRNPGI 189
            +   AY KM+LHAAKYP  AVNG LLGE      ++  +DA+PLFH    LAP+LE + + +D++  + GL IVG++QAN+ +D+N+P  ++ KI +KI D   +G   LL++ N +L ++ D  A+  Y    N      K L VA   +T+      +  +    +VD D HLDD+S DW N  I
Sbjct:    5 ISAKAYTKMLLHAAKYPHKAVNGVLLGEESIQDSEVYAQDAIPLFHQCLGLAPMLEVALNQVDSYCKASGLQIVGYFQANEHIDNNSPDGIAYKIGEKITDHCANG--CLLMIDNTKLSVSCDDVAIKCYIVQDNKWKLIDKDLSVAGGDDTLNLTSDLIEGKAYQSLVDFDNHLDDMSLDWLNHDI 189          
BLAST of mRNA_C-linearis_contig81.15954.1 vs. uniprot
Match: A7RMN9_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RMN9_NEMVE)

HSP 1 Score: 118 bits (296), Expect = 4.590e-30
Identity = 72/184 (39.13%), Postives = 113/184 (61.41%), Query Frame = 0
Query:   12 AYVKMMLHAAKYPWAAVNGFLLGEGGSPAGQICVKDAVPLFHTST-LAPLLETSASMIDAHAASVGLSIVGFYQANQCLDDNAPGTLSSKIMDKI-DVARDGSSVLLVVSNKRLEIAGDS-AVSAYG-RDANNSFRKHLEVAVSG--ETIQAFESALAQRVEAKVVDIDEHLDDVSKDWRNPGI 189
            AY KM+LHA+KYP  AVNG LLGE  +  G++ V DAVPLFH    LAPLLE + + +D++  ++G  I+G+YQAN+ +++N+P  ++ KI +KI D   +G   +L++ N ++ I+ D  A   Y  +D+   F +  +V V G  +T+      L  +    ++D D HLDD+++DW N  I
Sbjct:    9 AYAKMLLHASKYPHKAVNGVLLGEEVTHDGELYVLDAVPLFHHCLGLAPLLEVALTQVDSYCKTLGHHIIGYYQANEHIENNSPDNIAYKIGEKIADQCSNG--FILMIDNSKMSISCDEVACKCYTVQDSKWKFCEK-DVCVDGGDDTLSLTSELLEGKAYQSLIDFDNHLDDITQDWLNRDI 189          
BLAST of mRNA_C-linearis_contig81.15954.1 vs. uniprot
Match: A0A6P8Z1H3_THRPL (ER membrane protein complex subunit 8/9 homolog n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8Z1H3_THRPL)

HSP 1 Score: 117 bits (294), Expect = 8.680e-30
Identity = 70/182 (38.46%), Postives = 104/182 (57.14%), Query Frame = 0
Query:    6 VSVEGPAYVKMMLHAAKYPWAAVNGFLLGEGGSPAGQICVKDAVPLFHTST-LAPLLETSASMIDAHAASVGLSIVGFYQANQCLDDNAPGTLSSKIMDKIDVARDGSSVLLVVSNKRLEIAGDSAVSAYGRDANNSFRKHLEVAVSGETIQAFESALAQRVEAKVVDIDEHLDDVSKDWRN 186
            V++   AY KM+LHAAKYP  A+NG LLG       ++ V DAVPLFH    ++P+ E + + +D  AA+  LSI G+Y AN+ + D +    ++KI DKI      S+  +VV NK L ++ ++A  A  +  +  +R   +  V  E +    + L QR    +VD D HLDDVS+DW+N
Sbjct:    4 VTLSARAYCKMILHAAKYPHCAINGLLLGRLSKDKDELLVTDAVPLFHVCLQVSPMAEIALTQVDHAAANENLSIAGYYVANESISDLSIDKAANKIADKI-AENFSSACFIVVDNKHLTLSMETAGIAVSQYNDGKWRGK-DFKVDNEVLDTAAALLEQRAFKTLVDFDNHLDDVSQDWKN 183          
BLAST of mRNA_C-linearis_contig81.15954.1 vs. uniprot
Match: A0A3M6UC68_POCDA (MPN domain-containing protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6UC68_POCDA)

HSP 1 Score: 117 bits (293), Expect = 1.260e-29
Identity = 71/182 (39.01%), Postives = 104/182 (57.14%), Query Frame = 0
Query:   12 AYVKMMLHAAKYPWAAVNGFLLGEGGSPAGQICVKDAVPLFH-TSTLAPLLETSASMIDAHAASVGLSIVGFYQANQCLDDNAPGTLSSKIMDKI-DVARDGSSVLLVVSNKRLEI-AGDSAVSAYGRDANNSFRKHLEVAVSGE-TIQAFESALAQRVEAKVVDIDEHLDDVSKDWRNPGI 189
            AY K++LH AKYP  AVNG LLG      G+I   DA+PLFH T  LAP+LE + + +D H     L IVG+YQAN+ ++DN+P  +  KI +KI D   +G   +L+V N +L +   + A   Y    N   +   ++ + GE ++Q     L  +V   ++D D HLDD+++DW N  I
Sbjct:    9 AYAKILLHTAKYPHKAVNGVLLGVENPKDGEIYALDAIPLFHITLGLAPMLEVALARVDIHCKKNELQIVGYYQANEHINDNSPNAICYKIGEKICDQFNNG--FMLMVDNTKLTVPCKEIACKCYVVQDNKWKQSDKDLLLEGEDSLQLTTELLEGKVYQSLIDFDNHLDDITQDWLNKDI 188          
BLAST of mRNA_C-linearis_contig81.15954.1 vs. uniprot
Match: UPI0014031EA0 (ER membrane protein complex subunit 9 n=1 Tax=Amblyraja radiata TaxID=386614 RepID=UPI0014031EA0)

HSP 1 Score: 117 bits (292), Expect = 2.490e-29
Identity = 73/191 (38.22%), Postives = 105/191 (54.97%), Query Frame = 0
Query:    6 VSVEGPAYVKMMLHAAKYPWAAVNGFLLGEGGSP-AGQICV--KDAVPLFHTS-TLAPLLETSASMIDAHAASVGLSIVGFYQANQCLDDNAPGTLSSKIMDKIDVARDGSSVLLVVSNKRLEIAGDSAVSAYGRDANNSFRKHLEVAVSGE---TIQAFESALAQRVEAKVVDIDEHLDDVSKDWRNPGI 189
            V +   AYVKM LHAAK PW AVNG LL +   P   Q C+   DA+PLFHTS  L P+LE + + +D  +A+    I G+YQAN  L D++P  +++KI D++     G+ ++++ + K     G  AV  Y R  N    K   + +  +   T QA    +A R    +VD D+HLDD+ +DW N  I
Sbjct:    4 VEISPRAYVKMQLHAAKLPWRAVNGLLLAQRVGPDPSQPCLLLTDAMPLFHTSLALTPMLEVALNQVDLWSAANNQVIAGYYQANDQLTDHSPNLVATKIGDRVAEHMRGAVLIMLDNGKLSGEYGGPAVVVYERQDNRWTPKDKNLVMWRDWAGTRQALREMMAARAYRLLVDFDDHLDDIRRDWANGAI 194          
BLAST of mRNA_C-linearis_contig81.15954.1 vs. uniprot
Match: A0A2B4SL51_STYPI (ER membrane protein complex subunit 8 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SL51_STYPI)

HSP 1 Score: 116 bits (290), Expect = 3.630e-29
Identity = 65/187 (34.76%), Postives = 103/187 (55.08%), Query Frame = 0
Query:    6 VSVEGPAYVKMMLHAAKYPWAAVNGFLLGEGGSPAGQICVKDAVPLFHTST-LAPLLETSASMIDAHAASVGLSIVGFYQANQCLDDNAPGTLSSKIMDKIDVARDGSSVLLVVSNKRLEIAGDSAVSAYGRDANNSFRKHLEVAVSG--ETIQAFESALAQRVEAKVVDIDEHLDDVSKDWRNPGI 189
            + V   AY K++LH +KYP  AVNG L+GE     G+I   DA+PLFH +  LAP+LE + + +D H    GL IVG+YQAN+ ++DN+P  +  KI +KI    +   +L+V + K L    + A   Y    N   +   ++ + G  +++      +  +    ++D D HLDD+++DW N  I
Sbjct:    3 IQVSPRAYAKILLHTSKYPHKAVNGVLVGEENLKEGEIYALDAIPLFHIALGLAPMLEVALARVDIHCKENGLQIVGYYQANEHINDNSPNAICYKIGEKICDHFNNGFMLMVDNTKLLVPCDEIACKCYVVQDNKWKQSDKDLVLDGGEDSLGLTTELIEAKTYQSLIDFDNHLDDITQDWLNKDI 189          
BLAST of mRNA_C-linearis_contig81.15954.1 vs. uniprot
Match: A0A5D6Y068_9STRA (MPN domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y068_9STRA)

HSP 1 Score: 115 bits (288), Expect = 7.410e-29
Identity = 78/195 (40.00%), Postives = 110/195 (56.41%), Query Frame = 0
Query:    3 SGGVSVEGPAYVKMMLHAAKYPWAAVNGFLLGEGGSPAGQ-ICVKDAVPLFH-TSTLAPLLETSASMIDAHAASVGLSIVGFYQANQCLDDNAP-GTLSSKIMDKIDVARDGSSVLLVVSNKRLEIAGDSAVSAYGRDANNSF-----RKHLEVAVSGETIQAFESALAQRVEAKVVDIDEHLDDVSKDWRNPGI 189
            S    VE  AYVK+MLHAAK+P  A  G LLGE     GQ   V DAVPLFH  + LAPLLE + +++DA+A +    +VGFY A+   D  A     + +  DK++ A    + +L+V +++L+ A  S V    +D    +     R  +E + +    Q F  AL Q   A++VD DEHL+DV+KDWRNP +
Sbjct:    2 SDSYRVEPAAYVKLMLHAAKHPAGACCGLLLGE---EQGQGFVVADAVPLFHHAAPLAPLLEAACAVVDAYAQAQRQRVVGFYYASDAGDGAASLAHFAERAADKVE-ANCSRACVLLVDSQQLQSAAKSGVQLLLKDVKRGWVRVDNRLRVEDSGARSAAQVFTRALEQNAFAELVDFDEHLEDVAKDWRNPHV 192          
BLAST of mRNA_C-linearis_contig81.15954.1 vs. uniprot
Match: A0A0R3SR86_HYMDI (Uncharacterized protein n=2 Tax=Hymenolepis diminuta TaxID=6216 RepID=A0A0R3SR86_HYMDI)

HSP 1 Score: 115 bits (287), Expect = 8.940e-29
Identity = 67/185 (36.22%), Postives = 106/185 (57.30%), Query Frame = 0
Query:    6 VSVEGPAYVKMMLHAAKYPWAAVNGFLLGEGGSPAGQICVKDAVPLFHTS-TLAPLLETSASMIDAHAASVGLSIVGFYQANQCLDDNAPGTLSSKIMDKIDVARDGSSVLLVVSNKRLEIAGDSAVSAYGRDANNSFRKHLEVAVSGETIQAFESALAQRVEAKVVDIDEHLDDVSKDWRNPGI 189
            V +E  AY K++LHA+KYP  A+NG LLGE     G+  ++D VPLFH   TL P+LE + S I+++  +V L I G+YQAN+  + N    ++++I DKI     G   +++++N RL        + Y +  + S++K  ++ +        +  L++    + VD D HLDDVSKDWRN  +
Sbjct:    4 VHLESIAYAKILLHASKYPHLAINGVLLGEYDQ--GKFIIQDCVPLFHGCLTLVPMLEVALSQIESYCGTVNLKICGYYQANELANCNDINQIATRIGDKI-ADNIGFGNVIMLNNDRLTSLSSECFTLYCKKGD-SWQKGPKITIESSAADLLKPLLSEAGLEEFVDFDNHLDDVSKDWRNSNL 184          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig81.15954.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMA2_ECTSI2.140e-9675.00COX4 neighbour n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A835YUA8_9STRA2.950e-3238.10COX4 neighbour n=1 Tax=Tribonema minus TaxID=30337... [more]
UPI000A2A7D066.940e-3239.04ER membrane protein complex subunit 8 n=1 Tax=Exai... [more]
A7RMN9_NEMVE4.590e-3039.13Predicted protein n=1 Tax=Nematostella vectensis T... [more]
A0A6P8Z1H3_THRPL8.680e-3038.46ER membrane protein complex subunit 8/9 homolog n=... [more]
A0A3M6UC68_POCDA1.260e-2939.01MPN domain-containing protein n=1 Tax=Pocillopora ... [more]
UPI0014031EA02.490e-2938.22ER membrane protein complex subunit 9 n=1 Tax=Ambl... [more]
A0A2B4SL51_STYPI3.630e-2934.76ER membrane protein complex subunit 8 n=1 Tax=Styl... [more]
A0A5D6Y068_9STRA7.410e-2940.00MPN domain-containing protein n=1 Tax=Pythium bras... [more]
A0A0R3SR86_HYMDI8.940e-2936.22Uncharacterized protein n=2 Tax=Hymenolepis diminu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005366ER membrane protein complex subunit 8/9PFAMPF03665UPF0172coord: 6..188
e-value: 3.3E-49
score: 167.6
IPR005366ER membrane protein complex subunit 8/9PANTHERPTHR12941ER MEMBRANE PROTEIN COMPLEXcoord: 5..190
IPR037518MPN domainPROSITEPS50249MPNcoord: 6..140
score: 13.327

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig81contigC-linearis_contig81:382516..386279 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig81.15954.1mRNA_C-linearis_contig81.15954.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig81 382482..387081 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig81.15954.1 ID=prot_C-linearis_contig81.15954.1|Name=mRNA_C-linearis_contig81.15954.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=193bp
MSSGGVSVEGPAYVKMMLHAAKYPWAAVNGFLLGEGGSPAGQICVKDAVP
LFHTSTLAPLLETSASMIDAHAASVGLSIVGFYQANQCLDDNAPGTLSSK
IMDKIDVARDGSSVLLVVSNKRLEIAGDSAVSAYGRDANNSFRKHLEVAV
SGETIQAFESALAQRVEAKVVDIDEHLDDVSKDWRNPGIASA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005366EMC8/9
IPR037518MPN