prot_C-linearis_contig80.15897.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig80.15897.1
Unique Nameprot_C-linearis_contig80.15897.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length98
Homology
BLAST of mRNA_C-linearis_contig80.15897.1 vs. uniprot
Match: D7FV69_ECTSI (DPH-type MB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV69_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 2.860e-45
Identity = 77/99 (77.78%), Postives = 80/99 (80.81%), Query Frame = 0
Query:    1 MPATVYEEVALAEMTYEDSEQMYYYECPCGDKFEISLEDLYDGEDIAPCPSCTLQIKVLFKEGDLPELR--QEXXXXXXXXXRGGAPVVVASPLVEAQA 97
            M A VYEEVAL EM Y DSEQMYYYECPCGDKFEISLEDLYDGEDIAPCPSCTLQIKVLF+E +LPELR  +E         RGG PVVVAS LVEAQA
Sbjct:    1 MSAVVYEEVALEEMVYNDSEQMYYYECPCGDKFEISLEDLYDGEDIAPCPSCTLQIKVLFEESELPELRPEEEKEEEHGHDSRGGEPVVVASTLVEAQA 99          
BLAST of mRNA_C-linearis_contig80.15897.1 vs. uniprot
Match: A0A835Z4X0_9STRA (Diphthamide biosynthesis protein 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4X0_9STRA)

HSP 1 Score: 103 bits (256), Expect = 7.780e-27
Identity = 48/68 (70.59%), Postives = 57/68 (83.82%), Query Frame = 0
Query:    3 ATVYEEVALAEMTYEDSEQMYYYECPCGDKFEISLEDLYDGEDIAPCPSCTLQIKVLFKEGDLPELRQ 70
            + VYEEVALA+MT++ +EQMY Y CPCGD FEISLEDL DGEDIAPCPSCTL+I+VL+    LP L+Q
Sbjct:    4 SVVYEEVALADMTFDAAEQMYTYSCPCGDLFEISLEDLLDGEDIAPCPSCTLRIRVLYDMESLPPLQQ 71          
BLAST of mRNA_C-linearis_contig80.15897.1 vs. uniprot
Match: A0A662Y1E6_9STRA (DPH-type MB domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y1E6_9STRA)

HSP 1 Score: 101 bits (251), Expect = 7.070e-26
Identity = 44/68 (64.71%), Postives = 56/68 (82.35%), Query Frame = 0
Query:    4 TVYEEVALAEMTYEDSEQMYYYECPCGDKFEISLEDLYDGEDIAPCPSCTLQIKVLFKEGDLPELRQE 71
            +VY+EV + +M +   EQ YYY CPCGDKF I+LEDLYDGEDIA CPSC+L I+V+F EG+LPEL++E
Sbjct:   26 SVYDEVEIEDMEFNAEEQAYYYPCPCGDKFVIALEDLYDGEDIASCPSCSLTIRVVFDEGELPELKEE 93          
BLAST of mRNA_C-linearis_contig80.15897.1 vs. uniprot
Match: A0A7S2W7Y0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W7Y0_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.190e-25
Identity = 47/88 (53.41%), Postives = 64/88 (72.73%), Query Frame = 0
Query:    4 TVYEEVALAEMTYEDSEQMYYYECPCGDKFEISLEDLYDGEDIAPCPSCTLQIKVLFKEGDLPELRQEXXXXXXXXXRGGAPVVVASP 91
            +VYEEV L +M Y+++  M++Y+CPCGD FEISLE+L+DGEDIAPCPSC+L+I+VL++E DLP L            +   PVV A+P
Sbjct:    2 SVYEEVQLKDMRYDEANLMFFYQCPCGDLFEISLEELHDGEDIAPCPSCSLKIRVLYEEEDLPALPTGANAPAERSSKPLPPVVAAAP 89          
BLAST of mRNA_C-linearis_contig80.15897.1 vs. uniprot
Match: A0A662X3X8_9STRA (DPH-type MB domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X3X8_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 4.060e-25
Identity = 43/68 (63.24%), Postives = 55/68 (80.88%), Query Frame = 0
Query:    4 TVYEEVALAEMTYEDSEQMYYYECPCGDKFEISLEDLYDGEDIAPCPSCTLQIKVLFKEGDLPELRQE 71
            +VY+EV + +M +   EQ YYY CPCGDKF I+LEDLYDGEDIA CPSC+L I+V+F E +LPEL++E
Sbjct:    2 SVYDEVEIEDMEFNAEEQAYYYPCPCGDKFVIALEDLYDGEDIASCPSCSLTIRVVFDEDELPELKEE 69          
BLAST of mRNA_C-linearis_contig80.15897.1 vs. uniprot
Match: K3WTP3_GLOUD (DPH-type MB domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTP3_GLOUD)

HSP 1 Score: 98.2 bits (243), Expect = 5.170e-25
Identity = 41/68 (60.29%), Postives = 57/68 (83.82%), Query Frame = 0
Query:    4 TVYEEVALAEMTYEDSEQMYYYECPCGDKFEISLEDLYDGEDIAPCPSCTLQIKVLFKEGDLPELRQE 71
            +VY+EV + +M Y+  EQ+YYY CPCGDKF I+L++LYDGEDIA CPSC+L ++V+F+E DLPEL+ +
Sbjct:    2 SVYDEVEIEDMEYDAEEQVYYYPCPCGDKFFITLDELYDGEDIATCPSCSLTLRVVFEEDDLPELKDD 69          
BLAST of mRNA_C-linearis_contig80.15897.1 vs. uniprot
Match: G4YJ90_PHYSP (DPH-type MB domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=G4YJ90_PHYSP)

HSP 1 Score: 97.8 bits (242), Expect = 7.960e-25
Identity = 42/69 (60.87%), Postives = 55/69 (79.71%), Query Frame = 0
Query:    3 ATVYEEVALAEMTYEDSEQMYYYECPCGDKFEISLEDLYDGEDIAPCPSCTLQIKVLFKEGDLPELRQE 71
            A VY+EV + +M ++  EQ+YYY CPCGD+F I LE+LYDGEDIA CPSC+L I+V+F E  LPEL++E
Sbjct:    2 AAVYDEVEIEDMEFDAEEQVYYYPCPCGDRFSIDLEELYDGEDIATCPSCSLTIRVIFDEETLPELKEE 70          
BLAST of mRNA_C-linearis_contig80.15897.1 vs. uniprot
Match: A0A6A4D2K3_9STRA (DPH-type MB domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4D2K3_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 9.810e-25
Identity = 42/69 (60.87%), Postives = 56/69 (81.16%), Query Frame = 0
Query:    3 ATVYEEVALAEMTYEDSEQMYYYECPCGDKFEISLEDLYDGEDIAPCPSCTLQIKVLFKEGDLPELRQE 71
            A VY+EV + +M ++  EQ+YYY CPCGD+F I LE+LYDGEDIA CPSC+L I+V+F E +LPEL++E
Sbjct:    2 AAVYDEVEIEDMEFDAEEQVYYYPCPCGDRFSIDLEELYDGEDIATCPSCSLTIRVVFDEENLPELKEE 70          
BLAST of mRNA_C-linearis_contig80.15897.1 vs. uniprot
Match: A0A7R9VMJ4_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VMJ4_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 4.850e-24
Identity = 41/68 (60.29%), Postives = 56/68 (82.35%), Query Frame = 0
Query:    4 TVYEEVALAEMTYEDSEQMYYYECPCGDKFEISLEDLYDGEDIAPCPSCTLQIKVLFKEGDLPELRQE 71
            ++YEEV + ++ Y+ +EQ+Y Y CPCGDKF I+LE+L+DGEDIA CPSCTLQI V++ E DLPEL ++
Sbjct:    2 SIYEEVEIEDLDYDSTEQLYTYPCPCGDKFRITLEELWDGEDIARCPSCTLQIMVVYDEEDLPELTED 69          
BLAST of mRNA_C-linearis_contig80.15897.1 vs. uniprot
Match: A0A1V9ZHU1_9STRA (Diphthamide biosynthesis protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZHU1_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.310e-23
Identity = 39/68 (57.35%), Postives = 56/68 (82.35%), Query Frame = 0
Query:    4 TVYEEVALAEMTYEDSEQMYYYECPCGDKFEISLEDLYDGEDIAPCPSCTLQIKVLFKEGDLPELRQE 71
            +VY+EV + +M ++++EQ+YYY CPCGDKF I L++LYDGEDIA CPSC+L I+++F E  LP LR++
Sbjct:    2 SVYDEVEIEDMEFDEAEQIYYYPCPCGDKFFIGLDELYDGEDIASCPSCSLTIRIIFDEDALPPLRED 69          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig80.15897.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV69_ECTSI2.860e-4577.78DPH-type MB domain-containing protein n=2 Tax=Ecto... [more]
A0A835Z4X0_9STRA7.780e-2770.59Diphthamide biosynthesis protein 3 n=1 Tax=Tribone... [more]
A0A662Y1E6_9STRA7.070e-2664.71DPH-type MB domain-containing protein n=1 Tax=Noth... [more]
A0A7S2W7Y0_9STRA1.190e-2553.41Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A662X3X8_9STRA4.060e-2563.24DPH-type MB domain-containing protein n=1 Tax=Noth... [more]
K3WTP3_GLOUD5.170e-2560.29DPH-type MB domain-containing protein n=1 Tax=Glob... [more]
G4YJ90_PHYSP7.960e-2560.87DPH-type MB domain-containing protein n=12 Tax=Phy... [more]
A0A6A4D2K3_9STRA9.810e-2560.87DPH-type MB domain-containing protein n=3 Tax=Phyt... [more]
A0A7R9VMJ4_9STRA4.850e-2460.29Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A1V9ZHU1_9STRA1.310e-2357.35Diphthamide biosynthesis protein n=1 Tax=Achlya hy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036671DPH Zinc finger superfamilyGENE3D3.10.660.10coord: 3..89
e-value: 1.3E-28
score: 100.7
IPR036671DPH Zinc finger superfamilySUPERFAMILY144217CSL zinc fingercoord: 4..76
IPR007872Zinc finger, DPH-typePFAMPF05207zf-CSLcoord: 7..61
e-value: 1.9E-19
score: 69.1
IPR007872Zinc finger, DPH-typePROSITEPS51074ZF_DPHcoord: 5..61
score: 20.759
NoneNo IPR availablePANTHERPTHR21454:SF2DPH3 HOMOLOGcoord: 5..78
NoneNo IPR availablePANTHERPTHR21454FAMILY NOT NAMEDcoord: 5..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig80contigC-linearis_contig80:537762..538618 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig80.15897.1mRNA_C-linearis_contig80.15897.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig80 537702..539815 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig80.15897.1 ID=prot_C-linearis_contig80.15897.1|Name=mRNA_C-linearis_contig80.15897.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=98bp
MPATVYEEVALAEMTYEDSEQMYYYECPCGDKFEISLEDLYDGEDIAPCP
SCTLQIKVLFKEGDLPELRQEEDEEEENDSRGGAPVVVASPLVEAQA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036671Znf_DHP_sf
IPR007872Znf_DHP