prot_C-linearis_contig80.15889.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig80.15889.1
Unique Nameprot_C-linearis_contig80.15889.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length545
Homology
BLAST of mRNA_C-linearis_contig80.15889.1 vs. uniprot
Match: A0A6H5JQ98_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ98_9PHAE)

HSP 1 Score: 384 bits (985), Expect = 1.690e-124
Identity = 218/346 (63.01%), Postives = 244/346 (70.52%), Query Frame = 0
Query:   60 MTGRGRPTAKAKDKEDAKLLGADRVPENQKREIYERVRRAVDAKAGLCTTHKVGSSAWDKNEQRLLEDGLRYYPHDKHSNMFIYIRIAAQLPKKTVRDVAHHLRHMQ----DAHRAKVEASTGPNPXXXXXXXXXXXXXXXXXXXXAMHEHQMAAMFAANXXXXXXXXXTLPGLAQGLAGPNGPGPHLKDDKKETRVCALVQENVALLNSIRENMMMGRFFDNHPLMIAFDKNVKEVTALLGTLPFAEMQKLPVQQINPYFITGSLPPTMGTQ-PASPGRHLHP----------PHGVGPPPGHANVSAVGNG----NGHNFAQPPVTGVDQLVSSAAHSVVAGGA 386
            M  RGRP+AK K+KE  + LG  RVPENQKRE+YERVRRA++AK G+CT+HKVGSS+WD+NEQR+LEDGLRYY HD+HSNM IYIRIAA LPKKTVRDVAHHLRHMQ    D HRAK EA+    P                    AMHEH MAAMFAAN         TLPGLA GLAGP+GPGPHLKD+K E RVC L+QEN+AL+NSIRENM+MGRFFDNHPLMIAFDKNVKEVTALL TLPFAEMQKLPVQ INPYFITGSLP  +G Q P SP  H+ P          P GVG   GH + S+ GNG    +G N AQP     +QL  S A +  A  A
Sbjct:    1 MAARGRPSAKEKEKEVERALGVHRVPENQKREVYERVRRAMEAKNGVCTSHKVGSSSWDENEQRVLEDGLRYYSHDQHSNMLIYIRIAAGLPKKTVRDVAHHLRHMQARSRDEHRAKPEAAA---PGMNNPAKRHHPDPGAAAAMAAMHEHHMAAMFAANAAAGMAAMQTLPGLAPGLAGPSGPGPHLKDEKVEARVCTLLQENMALINSIRENMVMGRFFDNHPLMIAFDKNVKEVTALLATLPFAEMQKLPVQ-INPYFITGSLPAGVGVQQPGSPSHHVQPXXXXXXXXXAPSGVGIA-GHVDESSSGNGAVERSGQNDAQPAGGVAEQLDPSPALAPAAPAA 341          
BLAST of mRNA_C-linearis_contig80.15889.1 vs. uniprot
Match: D7FV74_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV74_ECTSI)

HSP 1 Score: 186 bits (473), Expect = 1.460e-53
Identity = 88/107 (82.24%), Postives = 98/107 (91.59%), Query Frame = 0
Query:   60 MTGRGRPTAKAKDKEDAKLLGADRVPENQKREIYERVRRAVDAKAGLCTTHKVGSSAWDKNEQRLLEDGLRYYPHDKHSNMFIYIRIAAQLPKKTVRDVAHHLRHMQ 166
            M  RGRP+AK KDKEDA+ LG  RVPENQKRE+YERVRRA++AK G+CT+HKVGSS+WDKNEQR+LEDGLRYYPHD+HSNM IYIRIAA LPKKTVRDVAHHLRHMQ
Sbjct:    1 MAARGRPSAKEKDKEDARALGVHRVPENQKREVYERVRRAMEAKTGVCTSHKVGSSSWDKNEQRVLEDGLRYYPHDQHSNMLIYIRIAAGLPKKTVRDVAHHLRHMQ 107          
BLAST of mRNA_C-linearis_contig80.15889.1 vs. uniprot
Match: D7G053_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G053_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 2.340e-18
Identity = 47/51 (92.16%), Postives = 50/51 (98.04%), Query Frame = 0
Query:  260 VALLNSIRENMMMGRFFDNHPLMIAFDKNVKEVTALLGTLPFAEMQKLPVQ 310
            +AL+NSIRENM+MGRFFDNHPLMIAFDKNVKEVTALL TLPFAEMQKLPVQ
Sbjct:    1 MALINSIRENMVMGRFFDNHPLMIAFDKNVKEVTALLATLPFAEMQKLPVQ 51          
BLAST of mRNA_C-linearis_contig80.15889.1 vs. uniprot
Match: A0A836CD79_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD79_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 3.250e-7
Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 0
Query:  105 GLCTTHKVGSSAWDKNEQRLLEDGLRYYPHDKHSNMFIYIRIAAQLPKKTVRDVAHHLRHMQDAHRA 171
            G    +  G++AWD +E+  L+ GL  Y   +HSNM +Y+++AA LPKKTVRDVA  +   Q A RA
Sbjct:  249 GAAMRYTSGAAAWDADERATLQRGLERYSPARHSNMTLYVKVAAMLPKKTVRDVAAAVWETQQARRA 315          
BLAST of mRNA_C-linearis_contig80.15889.1 vs. uniprot
Match: A0A421GWC8_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GWC8_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 4.260e-7
Identity = 53/203 (26.11%), Postives = 88/203 (43.35%), Query Frame = 0
Query:  110 HKVGSSAWDKNEQRLLEDGLRYYPHDKHSNMFIYIRIAAQLPKKTVRDVAHHLRHM--QDAHRAKVEASTGPNPXXXXXXXXXXXXXXXXXXXXAMHEHQMAAMFAANXXXXXXXXXTLPGLAQGLAGPNGPGPHLKDDKKETRVCALVQENVALLNSIRENMMMGRFFDNHPLMIAFDKNVKEVTALLGTLPFAEMQKLPVQ 310
            +    +AW   E ++L  GL  +P D++ N+  YI+IAA LP+K VRDVA+ ++ +       A   AS+   P                     +  +Q +A                          N P P    + +E R+ AL+Q+NV  +N++R N++ G+  +N   MI F  N + V + LG +    +  LP+Q
Sbjct:   36 YTTAQAAWTPQELQMLHAGLAQFPADQYDNVTRYIKIAATLPRKCVRDVAYKVKVLGYPSGQPAAAAASSTSQPTTNTGVTKRMK----------IEPYQESA--------------------------NQP-PASTGELEEARLAALLQDNVLAINTMRTNLLNGKADENRTQMIKFRDNCQTVLSSLGDI-CTSIPPLPLQ 200          
BLAST of mRNA_C-linearis_contig80.15889.1 vs. uniprot
Match: A0A1Y1HWE6_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HWE6_KLENI)

HSP 1 Score: 60.5 bits (145), Expect = 3.230e-6
Identity = 62/210 (29.52%), Postives = 89/210 (42.38%), Query Frame = 0
Query:  117 WDKNEQRLLEDGLRYYPHDKHSNMFIYIRIAAQLPKKTVRDVAHHLRHMQDAHRAKVEASTGPNPXXXXXXXXXXXXXXXXXXXXAMHEHQMAAMFAANXXXXXXXXXTLPGLAQGLAGPNGPGPHLKDDKKETRVCALVQENVALLNSIRENMMMGRFFDNHPLMIAFDKNVKEVTALLGTLP--FAEMQKLPVQQINPYFITGSLPPT 324
            W   EQ+LLE+GL  +P DK+SN+   I+IAA L  KTVRDVA   R M      K                     XXXXX    MH      +  A           +P L   +    GP   L D            ENV ++N IR+N+   +  +N+ L++ F  N+  +   + ++P   + M  LPV+ +N       LPP+
Sbjct:  146 WTAEEQKLLEEGLTRFPGDKYSNIVRCIKIAAMLADKTVRDVAMRCRWMSKKEIGKRRKDE------QQQSQTKKSKXXXXXKPGDMHR----PLAPARPPVPIMAPPPMPPLDDKIPPIGGPTGQLLD------------ENVRMVNQIRQNLANCKIQENNELLVKFRDNITTIINGMTSMPGILSSMPPLPVK-LNTPLADSFLPPS 332          
BLAST of mRNA_C-linearis_contig80.15889.1 vs. uniprot
Match: A0A6G0WS86_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WS86_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 9.100e-6
Identity = 49/212 (23.11%), Postives = 80/212 (37.74%), Query Frame = 0
Query:  103 KAGLCTTHKVGSSAWDKNEQRLLEDGLRYYPHDKHSNMFIYIRIAAQLPKKTVRDVAHHLRHMQDAHRAKVEASTGPNPXXXXXXXXXXXXXXXXXXXXAMHEHQMAAMFAANXXXXXXXXXTLPGLAQGLAGPNGPGPHLKDDKKET-----RVCALVQENVALLNSIRENMMMGRFFDNHPLMIAFDKN----VKEVTALLGTLPFAEMQ 305
            K      +    +AW   E  LL  GL  +P +++ N+  YI+IAA +P K++RDVA+ +R M        ++  G N                       ++H M  +                                   KKET      +   +Q+N  ++NSIR N+  G    N PLM  F  N    +K+++A+   +P   +Q
Sbjct:   37 KISRSNVYSTAQAAWSPEELHLLHKGLTEFPSERYDNITRYIKIAATIPDKSIRDVAYKIRSMD-------KSVVGNNNQLPQQSHMLPAMAQVKRQKVEHNDHGMQPLIPLTI------------------------------KKETISSEDSIKKSLQDNANVINSIRANLASGELHHNFPLMAHFRDNCSVILKKLSAMCSAVPPMSVQ 211          
BLAST of mRNA_C-linearis_contig80.15889.1 vs. uniprot
Match: A0A0D2W2C0_GOSRA (Uncharacterized protein n=1 Tax=Gossypium raimondii TaxID=29730 RepID=A0A0D2W2C0_GOSRA)

HSP 1 Score: 57.0 bits (136), Expect = 1.210e-5
Identity = 37/80 (46.25%), Postives = 46/80 (57.50%), Query Frame = 0
Query:  100 VDAKAGLCTTHKVGSSA-WDKNEQRLLEDGLRYYPHDKHSNMFIYIRIAAQLPKKTVRDVAHHLRHMQDAHRAKVEASTG 178
            VD+ AGL   H  G +  W  +EQ +LEDGL  Y  +   N+  YI+IAA LP+KTVRDVA   R MQ   R   E + G
Sbjct:   62 VDSVAGL--NHDTGLAVEWSVDEQYILEDGLEKYKEEP--NILKYIKIAASLPEKTVRDVALRCRWMQRKRRKPEEHNAG 137          
BLAST of mRNA_C-linearis_contig80.15889.1 vs. uniprot
Match: A0A6A4CBJ3_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A4CBJ3_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 2.680e-5
Identity = 54/201 (26.87%), Postives = 82/201 (40.80%), Query Frame = 0
Query:  110 HKVGSSAWDKNEQRLLEDGLRYYPHDKHSNMFIYIRIAAQLPKKTVRDVAHHLRHMQDAHRAKVEASTGPNPXXXXXXXXXXXXXXXXXXXXAMHEHQMAAMFAANXXXXXXXXXTLPGLAQGLAGPNGPGPHLKDDKKETRVCALVQENVALLNSIRENMMMGRFFDNHPLMIAFDKNVKEVTALLGTLPFAEMQKLPVQ 310
            +    +AW   E + L  GL  +P D+  N+  YI+IAA LP+K VRDVA            KV+A   P+                          Q AA  A                 +    PN       +  +E R+ AL+Q+NV  +N++R N++ G+  +N   MI F  N + V + LG +    +  LP+Q
Sbjct:   41 YSTAQAAWAPQELQALHAGLAQFPADQFDNVTRYIKIAATLPRKCVRDVAF-----------KVKALGYPS-------------------------GQPAAAVATKRM-----------TIEPYQEPNQAATSTAE-LEEARLAALLQDNVLAINTMRTNLLNGKADENRAQMIKFRDNCQTVLSALGDIS-TSIPPLPLQ 192          
BLAST of mRNA_C-linearis_contig80.15889.1 vs. uniprot
Match: A0A1U8KT25_GOSHI (uncharacterized protein LOC107920411 isoform X3 n=13 Tax=Gossypium TaxID=3633 RepID=A0A1U8KT25_GOSHI)

HSP 1 Score: 57.0 bits (136), Expect = 2.950e-5
Identity = 37/80 (46.25%), Postives = 46/80 (57.50%), Query Frame = 0
Query:  100 VDAKAGLCTTHKVGSSA-WDKNEQRLLEDGLRYYPHDKHSNMFIYIRIAAQLPKKTVRDVAHHLRHMQDAHRAKVEASTG 178
            VD+ AGL   H  G +  W  +EQ +LEDGL  Y  +   N+  YI+IAA LP+KTVRDVA   R MQ   R   E + G
Sbjct:   62 VDSVAGL--NHDTGLAVEWSVDEQYILEDGLEKYKEEP--NILKYIKIAASLPEKTVRDVALRCRWMQRKRRKPEEHNAG 137          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig80.15889.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5JQ98_9PHAE1.690e-12463.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FV74_ECTSI1.460e-5382.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G053_ECTSI2.340e-1892.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CD79_9STRA3.250e-746.27Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A421GWC8_9STRA4.260e-726.11Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A1Y1HWE6_KLENI3.230e-629.52Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A6G0WS86_9STRA9.100e-623.11Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A0D2W2C0_GOSRA1.210e-546.25Uncharacterized protein n=1 Tax=Gossypium raimondi... [more]
A0A6A4CBJ3_9STRA2.680e-526.87Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A1U8KT25_GOSHI2.950e-546.25uncharacterized protein LOC107920411 isoform X3 n=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.60coord: 115..170
e-value: 3.9E-5
score: 25.6
NoneNo IPR availablePANTHERPTHR14000FAMILY NOT NAMEDcoord: 111..311
NoneNo IPR availablePANTHERPTHR14000:SF6coord: 111..311

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig80contigC-linearis_contig80:469075..474145 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig80.15889.1mRNA_C-linearis_contig80.15889.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig80 469075..474145 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig80.15889.1 ID=prot_C-linearis_contig80.15889.1|Name=mRNA_C-linearis_contig80.15889.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=545bp
HGYRAVRPPPREVSKGTERLVLEVGGVHSRFEIHCCCYCCAYRKLITRGG
VGTARGERSMTGRGRPTAKAKDKEDAKLLGADRVPENQKREIYERVRRAV
DAKAGLCTTHKVGSSAWDKNEQRLLEDGLRYYPHDKHSNMFIYIRIAAQL
PKKTVRDVAHHLRHMQDAHRAKVEASTGPNPAPAKRHHPDPGAAAAAAAM
AAMHEHQMAAMFAANAAAGMAAMHTLPGLAQGLAGPNGPGPHLKDDKKET
RVCALVQENVALLNSIRENMMMGRFFDNHPLMIAFDKNVKEVTALLGTLP
FAEMQKLPVQQINPYFITGSLPPTMGTQPASPGRHLHPPHGVGPPPGHAN
VSAVGNGNGHNFAQPPVTGVDQLVSSAAHSVVAGGAQLPPQQQQQPQPPQ
QQSPQQQSQHQQPQHQQPQQHQQPPQHQHHQQPQQQHQQPKYFAAAAPPI
VTPAPQGLQHQLQPHTQVAQNAPEVPVVMKTAAAPSQAPVAGGMASAAAV
AGEAAATTEPIVALQGEATVGVVDGGGSGSEPLADPPKVAPSGA*
back to top