prot_C-linearis_contig80.15882.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig80.15882.1
Unique Nameprot_C-linearis_contig80.15882.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length467
Homology
BLAST of mRNA_C-linearis_contig80.15882.1 vs. uniprot
Match: D7FZI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI4_ECTSI)

HSP 1 Score: 219 bits (558), Expect = 7.100e-62
Identity = 116/251 (46.22%), Postives = 155/251 (61.75%), Query Frame = 0
Query:    3 LGCLSPTLPRRLRSWMLVCAGHKGR-WEEEVGGVMETIQQLEKGCRATMETSDGTRFTVFVRMGLLTAMLDTPYHKLWSNTKSSNSKTNKPCSTCEVTQQELGDNLYYFESNMRTQDGIDDALAYVDAGETVAEKGRRSTEKGVVVPDVENPLKKLTFDRVRMLGVDTFHQDAL--AKRVIRFLLQALNRDGLALVAGRLGMAGMIPPNAEPLGDITTDGGYAALTGNQIWLLASIVPLLFGPIFAAPQFM 250
            LGCLSP L RRLRSW L   G  G  WE +V  +M+ I+ L+ GC+A +   D    T  VRMGLLTA LD+P H LW+N K  N+KT + C  C V +++LG+  Y    N R+ DG+ + LA V + E   E+ + S   GVVVP   NPL ++TFDRV   G+D  HQ AL   K+++ F+L AL+  G  +V GR     M+PPN  P+ DIT+ GG+AALTG Q+WL++SI P L  PIF+ P  +
Sbjct:   61 LGCLSPALLRRLRSWHLATLGLPGAAWELDVLPLMKIIRLLQNGCKAEIAVGDKQTITALVRMGLLTANLDSPMHSLWTNQKHHNAKTERACQACTVPRKDLGNPRYDIVKNARSADGLREDLALVASIEKRQEQLKMSRALGVVVPRYPNPLDEVTFDRVEGCGMDVLHQSALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLL 311          
BLAST of mRNA_C-linearis_contig80.15882.1 vs. uniprot
Match: D7FWW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW9_ECTSI)

HSP 1 Score: 179 bits (455), Expect = 7.830e-47
Identity = 90/214 (42.06%), Postives = 130/214 (60.75%), Query Frame = 0
Query:   36 METIQQLEKGCRATMETSDGTRFTVFVRMGLLTAMLDTPYHKLWSNTKSSNSKTNKPCSTCEVTQQELGDNLYYFESNMRTQDGIDDALAYVDAGETVAEKGRRSTEKGVVVPDVENPLKKLTFDRVRMLGVDTFHQDAL--AKRVIRFLLQALNRDGLALVAGRLGMAGMIPPNAEPLGDITTDGGYAALTGNQIWLLASIVPLLFGPIFAAP 247
            M+ I++L+ GC+A     D    T  VR+GLLTA LD+P H LW+N K  N+KT + C  C V +++LG+  Y    N RT DG+ + L+ V A E   ++ + S   GVVVP   NP  ++ FDRV   G+D  HQ AL   K+++ F++ AL+  G  +V  R     M+PPN  P+ DIT+ GG++ALTG Q+WL++S  P L  PIF++P
Sbjct:    1 MKIIRRLQNGCKAEFSIGDKQTVTALVRLGLLTANLDSPLHSLWTNQKHHNAKTERACQACVVPRRDLGNPKYDIVKNARTADGLREDLSRVAATEKKQDRDKLSRALGVVVPRYPNPQDEVAFDRVEGCGMDILHQSALNSGKKIMGFVMDALDPAGSEIVRARFAWCRMLPPNVSPMADITSAGGWSALTGQQLWLVSSSFPFLLAPIFSSP 214          
BLAST of mRNA_C-linearis_contig80.15882.1 vs. uniprot
Match: A0A6H5KPX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPX4_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 8.200e-32
Identity = 84/246 (34.15%), Postives = 119/246 (48.37%), Query Frame = 0
Query:   62 VRMGLLTAMLDTPYHKLWSNTKSSNSKTNKPCSTCEVTQQELGDNLYYFESNMRTQDGIDDALAYVDAGETVAEKGRRSTEKGVVVPDVENPLKKLTFDRVRMLGVD---------------------TFHQDALA-------------------------------KRVIRFLLQALNRDGLALVAGRLGMAGMIPPNAEPLGDITTDGGYAALTGNQIWLLASIVPLLFGPIFAAPQFMLRALG 255
            VR+GLLTA LD+P H LW+N K  N+KT   C  C V +++LG+  Y    N RT DG+ + L  V A E   ++ + S   GVVVP   NPL ++  DRV   G+D                     T  +D +A                               K+++ F++ AL+  G  +V  R     M+PPN  P+ DIT+ GG +ALTG Q+WL+ASI P L  PIF++P  ++   G
Sbjct:   24 VRLGLLTANLDSPMHSLWANQKHHNAKTT--CQACVVPRRDLGNPKYDIVKNARTADGLKEDLDRVAATEKKQDRVKLSRALGVVVPRYPNPLHEVAIDRVDGCGMDGTQMPQVHIGRVADLVSQFSYTHKRDHIALLICSQNEQSDARITSQAACALTGESALNSGKKIMGFVMDALDPTGTEVVRARFAWRRMLPPNVSPIADITSAGGRSALTGQQLWLVASIFPFLLAPIFSSPDNLVSTAG 267          
BLAST of mRNA_C-linearis_contig80.15882.1 vs. uniprot
Match: D7G4Y8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Y8_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 1.660e-25
Identity = 62/138 (44.93%), Postives = 85/138 (61.59%), Query Frame = 0
Query:  115 RTQDGIDDALAYVDAGETVAEKGRRSTEKGVVVPDVENPLKKLTFDRVRMLGVDTFHQDAL--AKRVIRFLLQALNRDGLALVAGRLGMAGMIPPNAEPLGDITTDGGYAALTGNQIWLLASIVPLLFGPIFAAPQFM 250
            R  DG+ + LA V + +   E  + S   GVVVP   NPL ++TFDRV   G+D  HQ AL   K+++ F+L AL+  G  +V GR     M+PPN  P+ DIT+ GG+AALTG Q+WL++SI P L  PIF+ P  +
Sbjct:   69 RAFDGLREDLALVASIKKKQEHLKMSRALGVVVPRYPNPLDEVTFDRVEGCGMDVLHQSALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLL 206          
BLAST of mRNA_C-linearis_contig80.15882.1 vs. uniprot
Match: A0A6H5K975_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K975_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 1.280e-19
Identity = 60/174 (34.48%), Postives = 89/174 (51.15%), Query Frame = 0
Query:   76 HKLWSNTKSSNSKTNKPCSTCEVTQQELGDNLYYFESNMRTQDGIDDALAYVDAGETVAEKGRRSTEKGVVVPDVENPLKKLTFDRVRMLGVDTFHQDAL--AKRVIRFLLQALNRDGLALVAGRLGMAGMIPPNAEPLGDITTDGGYAALTGNQIWLLASIVPLLFGPIFAAP 247
            H LW+N K  N+KT + C  C V +++LG+  Y                        + ++ + S   GVVVP   NPL ++ FDRV   G+D  HQ AL   K+++ F++ AL+                 P  +E + DIT+ GG +ALTG Q+WL++SIVP L  PIF++P
Sbjct:    2 HSLWANQKHHNAKTERACQACVVPRRDLGNPKY-----------------------DIKDREKLSRALGVVVPRYPNPLDEVAFDRVEGCGMDILHQSALNSGKKIMGFVMDALD-----------------PAGSEIVPDITSAGGRSALTGQQLWLVSSIVPFLLAPIFSSP 135          
BLAST of mRNA_C-linearis_contig80.15882.1 vs. uniprot
Match: A0A6H5JE27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE27_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 1.790e-19
Identity = 60/152 (39.47%), Postives = 83/152 (54.61%), Query Frame = 0
Query:   25 KGRWEEEVGGVMETIQQLEKGCRATMETSDGTRFTVFVRMGLLTAMLDTPYHKLWSNTKSSNSKTNKPCSTCEVTQQELGDNLYYFESNMRTQDGIDDALAYVDAGETVAEKGRRSTEKGVVVPDVENPLKKLTFDRVRMLGVDTFHQDALA 176
            K R +++V  V E   Q         E + G    V VR GL   +LD+P H   +NTK++N  T + C  C+V ++ LG+  Y    N RT +G+D  + YV  G T  E+  R+ ++GVVVP V NPLKKLTFDR   +  D  H D+LA
Sbjct:  427 KRRRDQDVESVWEVTNQ---------EENVGVSALVLVRGGLQGLILDSPEHSDRTNTKNANGCTLRSCQRCKVPRRHLGNPRYDIRQNRRTAEGVDADIEYVKQGATKTERVERAKQRGVVVPKVSNPLKKLTFDRQLQVPFDILHADSLA 569          
BLAST of mRNA_C-linearis_contig80.15882.1 vs. uniprot
Match: D7FSA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSA9_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 1.570e-10
Identity = 33/74 (44.59%), Postives = 48/74 (64.86%), Query Frame = 0
Query:  177 KRVIRFLLQALNRDGLALVAGRLGMAGMIPPNAEPLGDITTDGGYAALTGNQIWLLASIVPLLFGPIFAAPQFM 250
            K+++ F+L AL+     +V GR     M+P N  P+ DIT+ GG+AALTG Q+WL++SI P L  PIF+ P  +
Sbjct:   14 KKIMTFVLDALDSAVSEIVRGRFAWRRMLPQNVLPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLL 87          
BLAST of mRNA_C-linearis_contig80.15882.1 vs. uniprot
Match: A0A6H5LGI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGI1_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 1.760e-8
Identity = 29/73 (39.73%), Postives = 47/73 (64.38%), Query Frame = 0
Query:  175 LAKRVIRFLLQALNRDGLALVAGRLGMAGMIPPNAEPLGDITTDGGYAALTGNQIWLLASIVPLLFGPIFAAP 247
            L   ++ F++ AL+  G  +V  R     M+P N  P+ DIT+ GG++ALTG Q+W+++SI P L  P+F++P
Sbjct:  601 LTVTIMGFVMDALDPAGSDIVRARFAWRRMLPRNVSPIADITSAGGWSALTGQQLWIVSSIFPFLLAPMFSSP 673          
BLAST of mRNA_C-linearis_contig80.15882.1 vs. uniprot
Match: A0A6H5JXS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXS6_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 6.850e-5
Identity = 26/53 (49.06%), Postives = 33/53 (62.26%), Query Frame = 0
Query:    3 LGCLSPTLPRRLRSWMLVCAGHKGR-WEEEVGGVMETIQQLEKGCRATMETSD 54
            LGCLSPTL RRLRSW L   G  G  WE ++  +ME I+ L+ GC+  +   D
Sbjct:   83 LGCLSPTLLRRLRSWYLATLGLPGAAWELDILPLMEIIRWLQNGCKTEISIGD 135          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig80.15882.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FZI4_ECTSI7.100e-6246.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWW9_ECTSI7.830e-4742.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KPX4_9PHAE8.200e-3234.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4Y8_ECTSI1.660e-2544.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K975_9PHAE1.280e-1934.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JE27_9PHAE1.790e-1939.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSA9_ECTSI1.570e-1044.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LGI1_9PHAE1.760e-839.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXS6_9PHAE6.850e-549.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..228
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 252..466
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 229..251

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig80contigC-linearis_contig80:423492..427595 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig80.15882.1mRNA_C-linearis_contig80.15882.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig80 420449..428076 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig80.15882.1 ID=prot_C-linearis_contig80.15882.1|Name=mRNA_C-linearis_contig80.15882.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=467bp
MTLGCLSPTLPRRLRSWMLVCAGHKGRWEEEVGGVMETIQQLEKGCRATM
ETSDGTRFTVFVRMGLLTAMLDTPYHKLWSNTKSSNSKTNKPCSTCEVTQ
QELGDNLYYFESNMRTQDGIDDALAYVDAGETVAEKGRRSTEKGVVVPDV
ENPLKKLTFDRVRMLGVDTFHQDALAKRVIRFLLQALNRDGLALVAGRLG
MAGMIPPNAEPLGDITTDGGYAALTGNQIWLLASIVPLLFGPIFAAPQFM
LRALGLGSHNRANGPSRSSSGRRTSTSAIASVSRSGAARSASSASATNRR
RSDENVAPPSASRPRSERKCFEGTRAVGRRGSQDRDGGHCRSAGRVVACA
PSSCRGGAAQDVGPKGRGLRGRIQTLLHEEYCATGETSTFSAAVHLVLPY
LHSIEAHPAWKVNGNGIANGHAVVKASFIIYEANKGTMTAEQYAGKRSSV
ITDVQSGDTDEVGTQP*
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