prot_C-linearis_contig80.15859.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig80.15859.1
Unique Nameprot_C-linearis_contig80.15859.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length811
Homology
BLAST of mRNA_C-linearis_contig80.15859.1 vs. uniprot
Match: D7FI06_ECTSI (GRAM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI06_ECTSI)

HSP 1 Score: 667 bits (1722), Expect = 2.410e-228
Identity = 474/792 (59.85%), Postives = 531/792 (67.05%), Query Frame = 0
Query:    5 ADAGGARVVFREVVAVGESRLWETKRIQHANLNRLHLRSIECILDPTVSADSIIGAVAYAVTSHGLRVTQRDQGRIVAQRVEAPYLASASSGSGRSGSGQEREEWRMVVASLGVSKEGGGGGKAVERVLSVSFMTDPVFKPTDFAGKGAAAMASLFGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPASGKSLSAVEIANARSNQRAESLLQAIVAELGEVGWGGGAAAADR--GAGAGSVVVPGDAGGRPPQVGSXXXXXXXXXXXXXXXXXXGSSPEQG-ASEEGEAAAVATNSDGGAEEPACAVRREEVLVLAPFDGSNGGXXXXXXXXXXXXXLSSGSLSPEEEGGKGDGDAPGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGDISAAVEVRLCLQFVEGLCVRAEEYSRRDAFETWKPLEETITRLERDTMILRQLLEPKYRAAGAAPPAVPTWAGRRSLGARDAYWLGPASAAATAAGNQRVAALVRSSPLFVVDGKAAKARVVAKKQKKLAVDAAEPCDGGEPEVRGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRRYVSMVQAVVKTLAEVIGRACEVQEEVFLKARLPGAQAYTVELERYRSAVVGGPALRAVAEGGXXXXXXXXXXXXXXXMDGELWRLFAARETRLYSSSAALGKKPGRIYVTYDTLWFHSKVLGFESRHVLPLAEVRSVTLLGTALDLSASVILATESGGVPGELMLVFPGQKLKQVEPLEILLRQLVRLATKERAAGAAAXXXXXAVTPE 793
            A  GGA VVFR+V A GESRLWETKRIQHA+LNRLHLRSIE ILDPTVSADSIIGAVAYAVTSHGLRVTQR+QGRIVAQRVEAPYLAS SSGS RSGSGQEREEWRMVVA++GVSK G G GK VERVLSVSFMTDPV KPTD AGKGAAA++SL GS     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     SL+AVEIAN RSNQRA+SLLQA+VAELG VGW G   A DR  G  A +  V G  G +P                          PEQ  A+E+GE A      DG       A   +EVLVLAPFDGSN  XXXXXXXXXXXXX   G LSPEEEG +G+     +                               +   +  VEV LCLQFVEGLC RAEEYSR DA ETW+PL++T++RLERD   LR LLEPKYRA GAAPP VP W+GRRS G      +G A+     A ++RV  L+RS+PLFV+DGK  KA+VV+              DG E ++ G                               RR+  +V+A VK L EV+GR CE +EE FLKARLPGAQAYTVELERY S + GG ALRA A                  +D +LWRLFAA+ETRLYSSSAALGKKPGR+YVTY TLWFHSKVLGFESRHVLPLAEV S+TLLGTALDLS+S+++AT SGGVPGELM +FPGQK +QVEPLE+LLRQL  LA KERAA A A     A +P+
Sbjct:    7 AAGGGAEVVFRKVAA-GESRLWETKRIQHADLNRLHLRSIESILDPTVSADSIIGAVAYAVTSHGLRVTQREQGRIVAQRVEAPYLASVSSGSWRSGSGQEREEWRMVVANVGVSK-GVGEGKMVERVLSVSFMTDPVPKPTDLAGKGAAAVSSLLGSVGSIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-SLTAVEIANVRSNQRADSLLQAVVAELGRVGWQG---AVDRRTGTAATAAAVVGPRGTKP--------------------SPGSPGPEQQKAAEKGEDAG-----DGARPGERAASMPQEVLVLAPFDGSNSSXXXXXXXXXXXXXX--GPLSPEEEGREGE-----KAEGPPRQEEDQETGVPEGGVATAGAGADAVVAAAAATVVEVGLCLQFVEGLCARAEEYSRHDAAETWRPLQDTVSRLERDNATLRSLLEPKYRAVGAAPPPVPIWSGRRSFGETYGSSVGSAATNVGNAPSKRVVELLRSTPLFVIDGKQVKAKVVSTAAAAXXXXXXXKRDG-ERQIDGSSSATGSAASDLGGS----------------RRHALLVRAAVKALTEVVGRVCESREEAFLKARLPGAQAYTVELERYGSTIAGGSALRATASS----PERDWASAGSVEVDDDLWRLFAAQETRLYSSSAALGKKPGRLYVTYSTLWFHSKVLGFESRHVLPLAEVVSITLLGTALDLSSSLVIATNSGGVPGELMFIFPGQKRRQVEPLEVLLRQLAVLAAKERAATAEATEATAAASPD 739          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig80.15859.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FI06_ECTSI2.410e-22859.85GRAM domain-containing protein n=2 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig80contigC-linearis_contig80:279504..283742 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig80.15859.1mRNA_C-linearis_contig80.15859.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig80 278408..284669 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig80.15859.1 ID=prot_C-linearis_contig80.15859.1|Name=mRNA_C-linearis_contig80.15859.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=811bp
MVRAADAGGARVVFREVVAVGESRLWETKRIQHANLNRLHLRSIECILDP
TVSADSIIGAVAYAVTSHGLRVTQRDQGRIVAQRVEAPYLASASSGSGRS
GSGQEREEWRMVVASLGVSKEGGGGGKAVERVLSVSFMTDPVFKPTDFAG
KGAAAMASLFGSFGSFSSAAANLGSSMSSGGSGGGGGGGGSGGVGKTGGT
GPASGKSLSAVEIANARSNQRAESLLQAIVAELGEVGWGGGAAAADRGAG
AGSVVVPGDAGGRPPQVGSGSGSGSGSGSRSRSRSRSGSSPEQGASEEGE
AAAVATNSDGGAEEPACAVRREEVLVLAPFDGSNGGSGSGGVNGAAAAAL
SSGSLSPEEEGGKGDGDAPGERQGTSQQGGQEAEEAGDGDGAGKAAGACA
GDSGDISAAVEVRLCLQFVEGLCVRAEEYSRRDAFETWKPLEETITRLER
DTMILRQLLEPKYRAAGAAPPAVPTWAGRRSLGARDAYWLGPASAAATAA
GNQRVAALVRSSPLFVVDGKAAKARVVAKKQKKLAVDAAEPCDGGEPEVR
GDGGGNGGGGGSSAAAGDTAAATATPAAGGGHRRYVSMVQAVVKTLAEVI
GRACEVQEEVFLKARLPGAQAYTVELERYRSAVVGGPALRAVAEGGGGRG
NGAGAGGGGGGMDGELWRLFAARETRLYSSSAALGKKPGRIYVTYDTLWF
HSKVLGFESRHVLPLAEVRSVTLLGTALDLSASVILATESGGVPGELMLV
FPGQKLKQVEPLEILLRQLVRLATKERAAGAAAAAPAAAVTPEGSHDGEG
GAENTQQFEV*
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