mRNA_C-linearis_contig80.15859.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_C-linearis_contig80.15859.1
Unique Name	mRNA_C-linearis_contig80.15859.1
Type	mRNA
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)

Homology

[Close]

BLAST of mRNA_C-linearis_contig80.15859.1 vs. uniprot
Match: D7FI06_ECTSI (GRAM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI06_ECTSI)

HSP 1 Score: 666 bits (1719), Expect = 2.740e-219
Identity = 473/789 (59.95%), Postives = 530/789 (67.17%), Query Frame = 2

Query: 1118 GGARVVFREVVAVGESRLWETKRIQHANLNRLHLRSIECILDPTVSADSIIGAVAYAVTSHGLRVTQRDQGRIVAQRVEAPYLASASSGSGRSGSGQEREEWRMVVASLGVSKEGGGGGKAVERVLSVSFMTDPVFKPTDFAGKGAAAMASLFGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPASGKSLSAVEIANARSNQRAESLLQAIVAELGEVGWGGGAAAADR--GAGAGSVVVPGDAGGRPPQVGSXXXXXXXXXXXXXXXXXXGSSPEQG-ASEEGEAAAVATNSDGGAEEPACAVRREEVLVLAPFDGSNGGXXXXXXXXXXXXXLSSGSLSPEEEGGKGDGDAPGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGDISAAVEVRLCLQFVEGLCVRAEEYSRRDAFETWKPLEETITRLERDTMILRQLLEPKYRAAGAAPPAVPTWAGRRSLGARDAYWLGPASAAATAAGNQRVAALVRSSPLFVVDGKAAKARVVAKKQKKLAVDAAEPCDGGEPEVRGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRRYVSMVQAVVKTLAEVIGRACEVQEEVFLKARLPGAQAYTVELERYRSAVVGGPALRAVAEGGXXXXXXXXXXXXXXXMDGELWRLFAARETRLYSSSAALGKKPGRIYVTYDTLWFHSKVLGFESRHVLPLAEVRSVTLLGTALDLSASVILATESGGVPGELMLVFPGQKLKQVEPLEILLRQLVRLATKERAAGAAAXXXXXAVTPE 3475
            GGA VVFR+V A GESRLWETKRIQHA+LNRLHLRSIE ILDPTVSADSIIGAVAYAVTSHGLRVTQR+QGRIVAQRVEAPYLAS SSGS RSGSGQEREEWRMVVA++GVSK G G GK VERVLSVSFMTDPV KPTD AGKGAAA++SL GS     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     SL+AVEIAN RSNQRA+SLLQA+VAELG VGW G   A DR  G  A +  V G  G +P                          PEQ  A+E+GE A      DG       A   +EVLVLAPFDGSN  XXXXXXXXXXXXX   G LSPEEEG +G+     +                               +   +  VEV LCLQFVEGLC RAEEYSR DA ETW+PL++T++RLERD   LR LLEPKYRA GAAPP VP W+GRRS G      +G A+     A ++RV  L+RS+PLFV+DGK  KA+VV+              DG E ++ G                               RR+  +V+A VK L EV+GR CE +EE FLKARLPGAQAYTVELERY S + GG ALRA A                  +D +LWRLFAA+ETRLYSSSAALGKKPGR+YVTY TLWFHSKVLGFESRHVLPLAEV S+TLLGTALDLS+S+++AT SGGVPGELM +FPGQK +QVEPLE+LLRQL  LA KERAA A A     A +P+
Sbjct:   10 GGAEVVFRKVAA-GESRLWETKRIQHADLNRLHLRSIESILDPTVSADSIIGAVAYAVTSHGLRVTQREQGRIVAQRVEAPYLASVSSGSWRSGSGQEREEWRMVVANVGVSK-GVGEGKMVERVLSVSFMTDPVPKPTDLAGKGAAAVSSLLGSVGSIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-SLTAVEIANVRSNQRADSLLQAVVAELGRVGWQG---AVDRRTGTAATAAAVVGPRGTKP--------------------SPGSPGPEQQKAAEKGEDAG-----DGARPGERAASMPQEVLVLAPFDGSNSSXXXXXXXXXXXXXX--GPLSPEEEGREGE-----KAEGPPRQEEDQETGVPEGGVATAGAGADAVVAAAAATVVEVGLCLQFVEGLCARAEEYSRHDAAETWRPLQDTVSRLERDNATLRSLLEPKYRAVGAAPPPVPIWSGRRSFGETYGSSVGSAATNVGNAPSKRVVELLRSTPLFVIDGKQVKAKVVSTAAAAXXXXXXXKRDG-ERQIDGSSSATGSAASDLGGS----------------RRHALLVRAAVKALTEVVGRVCESREEAFLKARLPGAQAYTVELERYGSTIAGGSALRATASS----PERDWASAGSVEVDDDLWRLFAAQETRLYSSSAALGKKPGRLYVTYSTLWFHSKVLGFESRHVLPLAEVVSITLLGTALDLSSSLVIATNSGGVPGELMFIFPGQKRRQVEPLEVLLRQLAVLAAKERAATAEATEATAAASPD 739

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig80.15859.1 vs. uniprot

BLAST of mRNA_C-linearis_contig80.15859.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FI06_ECTSI	2.740e-219	59.95	GRAM domain-containing protein n=2 Tax=Ectocarpus ...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig80	contig	C-linearis_contig80:278408..284669 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Properties


Property Name	Value
Hectar predicted targeting category	other localisation
Ec32 ortholog description	expressed unknown protein
Ec32 ortholog	Ec-12_006590.1
Exons	5
Model size	4456
Cds size	2433
Stop	1
Start	1

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930584.5945613-UTR-C-linearis_contig80:278407..279503	1622930584.5945613-UTR-C-linearis_contig80:278407..279503	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig80 278408..279503 +
1690881145.7731435-UTR-C-linearis_contig80:278407..279503	1690881145.7731435-UTR-C-linearis_contig80:278407..279503	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig80 278408..279503 +
1622930584.7276027-UTR-C-linearis_contig80:283742..284669	1622930584.7276027-UTR-C-linearis_contig80:283742..284669	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig80 283743..284669 +
1690881145.849272-UTR-C-linearis_contig80:283742..284669	1690881145.849272-UTR-C-linearis_contig80:283742..284669	Chordaria linearis ClinC8C monoicous	UTR	C-linearis_contig80 283743..284669 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930584.61307-CDS-C-linearis_contig80:279503..279678	1622930584.61307-CDS-C-linearis_contig80:279503..279678	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig80 279504..279678 +
1690881145.7836463-CDS-C-linearis_contig80:279503..279678	1690881145.7836463-CDS-C-linearis_contig80:279503..279678	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig80 279504..279678 +
1622930584.6295445-CDS-C-linearis_contig80:280220..281278	1622930584.6295445-CDS-C-linearis_contig80:280220..281278	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig80 280221..281278 +
1690881145.7948568-CDS-C-linearis_contig80:280220..281278	1690881145.7948568-CDS-C-linearis_contig80:280220..281278	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig80 280221..281278 +
1622930584.6449625-CDS-C-linearis_contig80:281565..281675	1622930584.6449625-CDS-C-linearis_contig80:281565..281675	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig80 281566..281675 +
1690881145.8040218-CDS-C-linearis_contig80:281565..281675	1690881145.8040218-CDS-C-linearis_contig80:281565..281675	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig80 281566..281675 +
1622930584.6658015-CDS-C-linearis_contig80:282008..282774	1622930584.6658015-CDS-C-linearis_contig80:282008..282774	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig80 282009..282774 +
1690881145.8181164-CDS-C-linearis_contig80:282008..282774	1690881145.8181164-CDS-C-linearis_contig80:282008..282774	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig80 282009..282774 +
1622930584.6852973-CDS-C-linearis_contig80:283418..283742	1622930584.6852973-CDS-C-linearis_contig80:283418..283742	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig80 283419..283742 +
1690881145.8363614-CDS-C-linearis_contig80:283418..283742	1690881145.8363614-CDS-C-linearis_contig80:283418..283742	Chordaria linearis ClinC8C monoicous	CDS	C-linearis_contig80 283419..283742 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig80.15859.1	prot_C-linearis_contig80.15859.1	Chordaria linearis ClinC8C monoicous	polypeptide	C-linearis_contig80 279504..283742 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at C-linearis_contig80:278408..284669+
coding sequence from alignment at C-linearis_contig80:278408..284669+

protein sequence of mRNA_C-linearis_contig80.15859.1

>prot_C-linearis_contig80.15859.1 ID=prot_C-linearis_contig80.15859.1|Name=mRNA_C-linearis_contig80.15859.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=811bp
MVRAADAGGARVVFREVVAVGESRLWETKRIQHANLNRLHLRSIECILDP
TVSADSIIGAVAYAVTSHGLRVTQRDQGRIVAQRVEAPYLASASSGSGRS
GSGQEREEWRMVVASLGVSKEGGGGGKAVERVLSVSFMTDPVFKPTDFAG
KGAAAMASLFGSFGSFSSAAANLGSSMSSGGSGGGGGGGGSGGVGKTGGT
GPASGKSLSAVEIANARSNQRAESLLQAIVAELGEVGWGGGAAAADRGAG
AGSVVVPGDAGGRPPQVGSGSGSGSGSGSRSRSRSRSGSSPEQGASEEGE
AAAVATNSDGGAEEPACAVRREEVLVLAPFDGSNGGSGSGGVNGAAAAAL
SSGSLSPEEEGGKGDGDAPGERQGTSQQGGQEAEEAGDGDGAGKAAGACA
GDSGDISAAVEVRLCLQFVEGLCVRAEEYSRRDAFETWKPLEETITRLER
DTMILRQLLEPKYRAAGAAPPAVPTWAGRRSLGARDAYWLGPASAAATAA
GNQRVAALVRSSPLFVVDGKAAKARVVAKKQKKLAVDAAEPCDGGEPEVR
GDGGGNGGGGGSSAAAGDTAAATATPAAGGGHRRYVSMVQAVVKTLAEVI
GRACEVQEEVFLKARLPGAQAYTVELERYRSAVVGGPALRAVAEGGGGRG
NGAGAGGGGGGMDGELWRLFAARETRLYSSSAALGKKPGRIYVTYDTLWF
HSKVLGFESRHVLPLAEVRSVTLLGTALDLSASVILATESGGVPGELMLV
FPGQKLKQVEPLEILLRQLVRLATKERAAGAAAAAPAAAVTPEGSHDGEG
GAENTQQFEV*

mRNA from alignment at C-linearis_contig80:278408..284669+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_C-linearis_contig80.15859.1 ID=mRNA_C-linearis_contig80.15859.1|Name=mRNA_C-linearis_contig80.15859.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6262bp|location=Sequence derived from alignment at C-linearis_contig80:278408..284669+ (Chordaria linearis ClinC8C monoicous)
TTGCTACATACTCCGGAGTAGTTTAGCGAGAAGAACTGCTACTGTGGTGA
CCTATTGGTGAGTGAACAGGAGTTCTGGTGGACGGAAACTGCCAGAGATT
TTCAAGGGGTATCTAACGTCATTGTCAGAGAGGGGCAAAAAAGAAAATCT
TGGGTGAGAAACATTTGGGTTGACGACCTTTCTGTGTCTGTGAGAAGAAC
CGAGGAGGGAACGAAAGGTGCACCCAAGGGATAAGGGTTCAAGTGTGTTG
TGCGTAAGAGAGCGCAAATGCCCTAGGACATGTGGTTTTTTCTAGGTTTT
GAACCAGCGAAAAATTCCCTCGGAAACAAGGGCGCACAAGGAAAGTGATC
CCGCACACCACACTACCCCCCGCTCCTCAGAGAGTCTGGAAAAAAAAAAG
CGCCTTTTCTTTTTGACGGTTTTGAACGACAAACTGACGCTGCCCAATAG
AGGGAGCACCTCTCTGGCCCTCTTGAACACTTTTTTCGCGCAGTTTGAGG
GCATTGGATACTCTCTTGATGTTGTTTGGACCGTCAATCGTTACTGCGGT
GAGGGGTCCACGAAGGGGGGTGTGTGTTTCATTCTGCGTACCCCCTGCCT
TTTTATCTAGGAATGACTGTCCTCATACTCTCCCTCTCCCTGAGAGGCCT
CAAAAAGTTTTGGGGGTGTGGTTTCGGAACTTTTTTTTTTGTGCGCCCTT
GTTGGAAATACTAGTGCTCGGTCCTGGCATGTTTGGCCGCAGGTGTTTAG
GTGTACACATACATGTACATGCGTTCGTGTGTTGGTGGTTTTGTATCCTG
GCGTGTTGACTATTGGGTCAAGTCTTGGCGAGACGGAGCAAAACATGCAT
TTCGCTAGAAAACACCTGCGTGTGATGCGTGTGATGCGTGTAATGCGGGC
GATCACTCGTGCATGGTTTTGCTGCTGCACCCGCATGAAACTCCTGCTGT
AGGCGCATATGCACCAGTTCGCTGGCCAACGTTAGCCTTCCGTTTTTCAC
CTTCTGTTACCAGACGTTCCAACAACAAAGGGTTCTTCGTCAAACCTCAC
CAGGTGTGTTGAACCCGCTTTGGCGAGGCCACGAAAACGGGAAAGCATGG
TCAGAGCTGCTGACGCCGGTGGCGCAAGAGTGGTGTTCCGAGAGGTCGTC
GCCGTCGGCGAATCGAGGCTGTGGGAGACCAAGCGGATTCAGCATGCCAA
CCTCAACCGGTTACATCTCCGCTCGATAGAGTGCATCCTAGACCCCACGG
TGTCGGCCGACAGCATCATCGGTGGGTCCCGCGCAAGCATAGGCCGCCTT
GCCTCCCATGAAAGCTGTTTGTCGGCTTTGCGGGGGGCGTTTTGCTGCCT
GCTCCATCGCATCGCCGTTGTTGTTTCGTTTTGTTTTGGCTACTTTTACT
TTTGCGCTTCAGCATCAGAGTTTTTTTCAACATTTGTCAAACCAACCCTG
TTTGGGCAGAGCTTGGCAGGTGGAACCGCATCCATCAAGCACGTTCTCCT
CGGTGTGTGTTGGTCTCTGCGCATGGGTCGAAATGGCGCATGGCGTCCAC
CGCCGCAGATCAACGGTGCTGTGGTTTGTGTAGGTACCTTGGCGTGTGGC
GGAATCCAAACACTTCTAGATTCTAGACTTGTGTGATGCGCGCCTTGCTC
TAGTCGGTCCGGTCATAACCACAAGCAATGTTCACGTGACGTCACTTTCT
TCCGCGCCACTTGACGTGGAAGATTATTTAGCATTTTCTTATCTTGCAAC
TCCTTCAAAACACTCCCGCGTGTTAACACCGCTTGCAACCGTTCGCCGCT
CTCTTGGTTTCAGGCGCGGTGGCGTACGCGGTGACGAGCCACGGGCTGCG
AGTGACCCAACGGGACCAGGGCCGCATCGTGGCGCAGCGTGTGGAAGCCC
CCTACCTGGCGAGCGCCTCCTCCGGCAGCGGGCGGTCCGGCTCCGGCCAG
GAGAGGGAGGAGTGGAGGATGGTCGTGGCCTCGCTGGGGGTCTCCAAGGA
GGGGGGAGGGGGAGGCAAGGCAGTCGAGCGAGTGCTGTCGGTCTCGTTCA
TGACCGATCCGGTCTTCAAGCCCACGGATTTCGCCGGGAAGGGAGCGGCC
GCGATGGCGTCCCTCTTCGGCTCCTTTGGCTCCTTCAGCTCGGCCGCCGC
CAACTTGGGCTCCTCGATGTCCTCGGGTGGCTCGGGCGGCGGCGGCGGCG
GCGGCGGCAGCGGCGGCGTTGGGAAGACAGGGGGAACCGGGCCAGCAAGC
GGAAAATCGCTGTCTGCCGTCGAGATCGCGAACGCGAGAAGCAACCAGCG
GGCGGAGTCTCTGCTCCAGGCGATCGTGGCGGAGCTCGGCGAGGTCGGGT
GGGGCGGCGGCGCGGCGGCAGCAGACCGAGGGGCAGGGGCAGGAAGTGTC
GTCGTTCCGGGCGATGCCGGAGGACGACCACCGCAGGTAGGATCAGGATC
AGGATCAGGATCAGGATCAGGATCAAGATCGAGATCGAGATCGAGATCGG
GATCGTCGCCGGAACAAGGAGCGTCGGAGGAAGGAGAGGCCGCTGCCGTT
GCTACAAACAGCGACGGAGGGGCTGAAGAGCCCGCGTGCGCCGTGCGGCG
GGAAGAGGTGCTGGTGCTCGCGCCGTTCGACGGCAGTAACGGCGGCAGCG
GCAGCGGCGGCGTTAACGGTGCCGCCGCCGCGGCATTGAGCTCGGGCTCT
CTTTCTCCCGAGGAAGAGGGCGGGAAGGGAGACGGAGACGCTCCGGGGGA
ACGGCAGGGTACTTCCCAGCAGGGAGGCCAGGAAGCCGAGGAAGCCGGGG
ATGGGGATGGGGCTGGAAAGGCCGCTGGGGCGTGTGCCGGCGATTCCGGC
GATATTTCTGCTGCCGTTGAGGTGAGTTTTGTTCTGGGTGGTATTTGTGT
CGAGTCACGATAGTGTACTTACTCTGTGTTCTGCTCGGATCGGCGCACGA
CTGCTGTTCGCAGGGCCCCGTGGCAAGTAAATGCTGCTTTCGTTCAGCCC
TTGATTTTGGGTCTCAGAAGTAGGTGAGCAGGCGGGGAACAAGCGACTTG
ATGTCGCCCGAGGGGACTTATTCTCCCGTGCCCCGTGCTTGCGCCCGCTC
TCTCGCTCGTGTTGGTCGGGCGCGCCTCTGTTTTGGCCGGCTTGGCTTGG
ATCCGCAGGTGCGATTGTGCCTGCAGTTCGTGGAAGGGCTCTGCGTGCGC
GCCGAGGAGTACAGCAGACGCGACGCTTTCGAGACCTGGAAGCCGCTGGA
GGAGACGATTACCCGATTGTGAGAGAAGGCGATCGGCAAGATGCGCCCTT
GCATCGATACATAGTACCATGTCGCTGCATGGTACTATATTTTCTTGAAT
TGATTCGACCACTCACTAGAAACAGATTTTCACGCATGCCTGTGTGAAGG
GCACCAGACTTCTGCTCCCTTTGCCCTTCGATCGGACGAGATCTGTTGAC
ACAGCAGTTTTTCATGAAACTAAGAATCACGGCCGGTAACAACGGGAGCT
ACGCTTCCTATCCGAGATTCGACCACCCGAGAATTAACGATCGTATGCGC
GAACTTGGACATTCCCCCAACCTACAAACGTACACGTTAAAATAAACCCA
GGGAGCGCGACACCATGATCCTGCGGCAGCTGCTAGAGCCCAAGTACCGG
GCCGCTGGCGCAGCTCCTCCGGCCGTGCCCACCTGGGCCGGTCGACGAAG
CCTCGGAGCGAGGGACGCGTATTGGCTGGGACCGGCATCGGCAGCGGCCA
CAGCGGCCGGAAACCAACGGGTTGCTGCGCTGGTGCGCTCGTCCCCGCTG
TTCGTCGTCGACGGGAAGGCGGCCAAGGCGAGGGTGGTGGCGAAGAAGCA
GAAGAAGCTCGCCGTTGATGCCGCTGAGCCCTGCGACGGCGGCGAGCCCG
AAGTCCGAGGAGACGGCGGCGGGAACGGGGGCGGGGGCGGATCTTCCGCG
GCCGCTGGGGACACGGCCGCGGCCACGGCCACGCCCGCCGCCGGAGGGGG
GCATCGGCGGTACGTCTCGATGGTGCAGGCGGTCGTGAAGACCCTCGCGG
AGGTGATAGGTCGCGCGTGCGAGGTGCAGGAGGAGGTGTTCCTCAAGGCC
CGGCTCCCCGGCGCCCAGGCCTACACGGTAGAGCTGGAGAGGTATCGGTC
GGCGGTTGTGGGAGGACCGGCGTTGAGAGCGGTGGCCGAGGGTGGTGGGG
GCCGAGGAAACGGCGCCGGCGCAGGGGGCGGTGGCGGGGGAATGGACGGA
GAGTTGTGGCGGCTGTTTGCCGCTCGGGAGACGCGGTTGTACAGCTCGTC
GGCCGCCTTGGGGAAGAAGCCCGGGAGGATCTACGTGACGTACGACACGC
TATGGTTCCATTCGAAGGTAGGCATCGGTGTGGAGTGTGGAGTGTGGATT
GATCGATTGATTGATCGCCAGGAGGGCTCTGTTTTGCTGTTTGGCGTCTT
TGCGGTGTTGGGTGTCTTTTTGCCTCGTTGTTTCGGTTTCGCCCTGGCTT
TAATGTGGCAAGTTGCGTCGTTTGTTGACGTTTTTTGCGTTGCTGTCTTG
GTCGTGCTGTGTCTGAAGGATGGGGAATCGAGAGTGTACATAAGGCCGAG
CTGGGTTTGGCGGCGTCTCAACAAGTGGCCGATGGCCGTACAGCAGTAGT
AACGGCAACCGTCGAGCAGTCTCAATCGCTGATGCGCTACTCGCCCGTCC
TATGCCCTTGCCCCTGGGTTGGATGCTCCTCCTGTTTCACTAACGTACTT
CGGAAGACACATGATCAATGTGGCCGAGACTATTCGTGTCCGCATCTCCA
CACCACCGCGTCCTTAAGAAACAGGCCGACAACAAGACTAGATAGAAGAC
AAGCCAAGAGAGGGAATCGTTGGTGGTCTTGGTCTTGTTCCAGCTCAGCG
GATACCCTCTTGCTCACTAACCTTGCATTTTCGACCCCCCCCCCCCCGAA
CGGTCGCCTTTACCATTCCTGGTGTACACGCCGTATAAAAACATAAAAAC
ATAAAAACAAGGTTCTGGGTTTCGAGAGTAGGCATGTTCTGCCCCTTGCG
GAAGTGCGGTCCGTCACCCTGCTCGGGACGGCGCTCGATCTTTCAGCAAG
CGTCATCCTTGCCACCGAGAGCGGGGGCGTACCCGGGGAGCTCATGCTGG
TCTTCCCGGGGCAAAAACTCAAGCAAGTGGAGCCGCTTGAGATACTCCTG
CGGCAGCTGGTGAGGCTGGCGACGAAAGAACGGGCGGCGGGGGCGGCGGC
GGCGGCACCAGCGGCGGCGGTGACGCCCGAGGGATCGCACGACGGGGAGG
GGGGAGCAGAGAACACGCAGCAGTTTGAAGTATGACTTTCACAGGGCAGG
CAGGCCCTCTCAGACTTAACCCCATGCGAACCAGACGAAGCGACGCGGGA
CTAGAGTCCAAACGGTACCGGTATTGTTTAGCTGGTTGTTCCGGGCGAGC
CCCAGACCAGCCGGGAGAGGTATCGTATGCATTCGTCGTCCCTTCGACAC
GGAAGTGCATGATAGAGTTAGAGCAAGGCTTTCAGGCGGTACTATAAGTA
CGAGGAGGCCTCTTCTGGGCCCCGTAACTGCTGTTCAGCGCCGTTGCAGA
AATTGGTGCGTTTTTGTTTCGCCTCGTGAACAGAATCAATGGCGGAGGGT
AGGTATTCCGGCGACGCACGAATCGGCATCTACCGGCATGAAACGGGGCG
GTCTGAGGGTTATAAAGACGATGGGTTGTTGTTGTCCAACACAGCCCACG
TTCTGTTACCTAGCCGCCGGGAGAGGGAGTGAAATAGGCATGAGCTGGTG
GCAGACGTATGCACCTCGCTGCGGTTCAGTTCCTTCGCGACGTGTTCCCG
TGCCATCAGACACAAGGTTCTGGCAAAGATCAGAAAAATCTGTCATGGAG
TCTGGAACTCTTGGTCGTGTGCGCTGGTGCGCCCTCTTTCTTTCGTTTGG
TTTTCGCTCGTGATTCTCGGCGATGTCGTTATTTTCCTTACGCGATTAGT
GGTGCGGTCTTCGCGGGTGTTGTTTCGACTTGCGTTCAAGGCCCTGAATG
ACCCACGGTGCTTGTTGAGTTGAGGAGCGGATCCCAACTGCTGACACGGC
GGCTCCTGAAGTCCAAGTGCGAGGATGAACTTGAGCTTACAGGGTCGAGG
ACAAGACCCAGACAACACCAAAGGTCTCTCGTGCGCGAGGGGGGAAAGGG
GCAGCCTCACGTGCCTCGGACAAGGCCCATGTCGGCTGTCGGCGTCTTTA
ATTTGGACGGGA

Coding sequence (CDS) from alignment at C-linearis_contig80:278408..284669+

>mRNA_C-linearis_contig80.15859.1 ID=mRNA_C-linearis_contig80.15859.1|Name=mRNA_C-linearis_contig80.15859.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4866bp|location=Sequence derived from alignment at C-linearis_contig80:278408..284669+ (Chordaria linearis ClinC8C monoicous)
ATGGTCAGAGCTGCTGACGCCGGTGGCGCAAGAGTGGTGTTCCGAGAGGT
CGTCGCCGTCGGCGAATCGAGGCTGTGGGAGACCAAGCGGATTCAGCATG
CCAACCTCAACCGGTTACATCTCCGCTCGATAGAGTGCATCCTAGACCCC
ACGGTGTCGGCCGACAGCATCATCGATGGTCAGAGCTGCTGACGCCGGTG
GCGCAAGAGTGGTGTTCCGAGAGGTCGTCGCCGTCGGCGAATCGAGGCTG
TGGGAGACCAAGCGGATTCAGCATGCCAACCTCAACCGGTTACATCTCCG
CTCGATAGAGTGCATCCTAGACCCCACGGTGTCGGCCGACAGCATCATCG
GCGCGGTGGCGTACGCGGTGACGAGCCACGGGCTGCGAGTGACCCAACGG
GACCAGGGCCGCATCGTGGCGCAGCGTGTGGAAGCCCCCTACCTGGCGAG
CGCCTCCTCCGGCAGCGGGCGGTCCGGCTCCGGCCAGGAGAGGGAGGAGT
GGAGGATGGTCGTGGCCTCGCTGGGGGTCTCCAAGGAGGGGGGAGGGGGA
GGCAAGGCAGTCGAGCGAGTGCTGTCGGTCTCGTTCATGACCGATCCGGT
CTTCAAGCCCACGGATTTCGCCGGGAAGGGAGCGGCCGCGATGGCGTCCC
TCTTCGGCTCCTTTGGCTCCTTCAGCTCGGCCGCCGCCAACTTGGGCTCC
TCGATGTCCTCGGGTGGCTCGGGCGGCGGCGGCGGCGGCGGCGGCAGCGG
CGGCGTTGGGAAGACAGGGGGAACCGGGCCAGCAAGCGGAAAATCGCTGT
CTGCCGTCGAGATCGCGAACGCGAGAAGCAACCAGCGGGCGGAGTCTCTG
CTCCAGGCGATCGTGGCGGAGCTCGGCGAGGTCGGGTGGGGCGGCGGCGC
GGCGGCAGCAGACCGAGGGGCAGGGGCAGGAAGTGTCGTCGTTCCGGGCG
ATGCCGGAGGACGACCACCGCAGGTAGGATCAGGATCAGGATCAGGATCA
GGATCAGGATCAAGATCGAGATCGAGATCGAGATCGGGATCGTCGCCGGA
ACAAGGAGCGTCGGAGGAAGGAGAGGCCGCTGCCGTTGCTACAAACAGCG
ACGGAGGGGCTGAAGAGCCCGCGTGCGCCGTGCGGCGGGAAGAGGTGCTG
GTGCTCGCGCCGTTCGACGGCAGTAACGGCGGCAGCGGCAGCGGCGGCGT
TAACGGTGCCGCCGCCGCGGCATTGAGCTCGGGCTCTCTTTCTCCCGAGG
AAGAGGGCGGGAAGGGAGACGGAGACGCTCCGGGGGAACGGCAGGGTACT
TCCCAGCAGGGAGGCCAGGAAGCCGAGGAAGCCGGGGATGGGGATGGGGC
TGGAAAGGCCGCTGGGGCGTGTGCCGGCGATTCCGGCGATATTTCTGCTG
CCGTTGAGGCGCGGTGGCGTACGCGGTGACGAGCCACGGGCTGCGAGTGA
CCCAACGGGACCAGGGCCGCATCGTGGCGCAGCGTGTGGAAGCCCCCTAC
CTGGCGAGCGCCTCCTCCGGCAGCGGGCGGTCCGGCTCCGGCCAGGAGAG
GGAGGAGTGGAGGATGGTCGTGGCCTCGCTGGGGGTCTCCAAGGAGGGGG
GAGGGGGAGGCAAGGCAGTCGAGCGAGTGCTGTCGGTCTCGTTCATGACC
GATCCGGTCTTCAAGCCCACGGATTTCGCCGGGAAGGGAGCGGCCGCGAT
GGCGTCCCTCTTCGGCTCCTTTGGCTCCTTCAGCTCGGCCGCCGCCAACT
TGGGCTCCTCGATGTCCTCGGGTGGCTCGGGCGGCGGCGGCGGCGGCGGC
GGCAGCGGCGGCGTTGGGAAGACAGGGGGAACCGGGCCAGCAAGCGGAAA
ATCGCTGTCTGCCGTCGAGATCGCGAACGCGAGAAGCAACCAGCGGGCGG
AGTCTCTGCTCCAGGCGATCGTGGCGGAGCTCGGCGAGGTCGGGTGGGGC
GGCGGCGCGGCGGCAGCAGACCGAGGGGCAGGGGCAGGAAGTGTCGTCGT
TCCGGGCGATGCCGGAGGACGACCACCGCAGGTAGGATCAGGATCAGGAT
CAGGATCAGGATCAGGATCAAGATCGAGATCGAGATCGAGATCGGGATCG
TCGCCGGAACAAGGAGCGTCGGAGGAAGGAGAGGCCGCTGCCGTTGCTAC
AAACAGCGACGGAGGGGCTGAAGAGCCCGCGTGCGCCGTGCGGCGGGAAG
AGGTGCTGGTGCTCGCGCCGTTCGACGGCAGTAACGGCGGCAGCGGCAGC
GGCGGCGTTAACGGTGCCGCCGCCGCGGCATTGAGCTCGGGCTCTCTTTC
TCCCGAGGAAGAGGGCGGGAAGGGAGACGGAGACGCTCCGGGGGAACGGC
AGGGTACTTCCCAGCAGGGAGGCCAGGAAGCCGAGGAAGCCGGGGATGGG
GATGGGGCTGGAAAGGCCGCTGGGGCGTGTGCCGGCGATTCCGGCGATAT
TTCTGCTGCCGTTGAGGTGCGATTGTGCCTGCAGTTCGTGGAAGGGCTCT
GCGTGCGCGCCGAGGAGTACAGCAGACGCGACGCTTTCGAGACCTGGAAG
CCGCTGGAGGAGACGATTACCCGATTGTGCGATTGTGCCTGCAGTTCGTG
GAAGGGCTCTGCGTGCGCGCCGAGGAGTACAGCAGACGCGACGCTTTCGA
GACCTGGAAGCCGCTGGAGGAGACGATTACCCGATTGGAGCGCGACACCA
TGATCCTGCGGCAGCTGCTAGAGCCCAAGTACCGGGCCGCTGGCGCAGCT
CCTCCGGCCGTGCCCACCTGGGCCGGTCGACGAAGCCTCGGAGCGAGGGA
CGCGTATTGGCTGGGACCGGCATCGGCAGCGGCCACAGCGGCCGGAAACC
AACGGGTTGCTGCGCTGGTGCGCTCGTCCCCGCTGTTCGTCGTCGACGGG
AAGGCGGCCAAGGCGAGGGTGGTGGCGAAGAAGCAGAAGAAGCTCGCCGT
TGATGCCGCTGAGCCCTGCGACGGCGGCGAGCCCGAAGTCCGAGGAGACG
GCGGCGGGAACGGGGGCGGGGGCGGATCTTCCGCGGCCGCTGGGGACACG
GCCGCGGCCACGGCCACGCCCGCCGCCGGAGGGGGGCATCGGCGGTACGT
CTCGATGGTGCAGGCGGTCGTGAAGACCCTCGCGGAGGTGATAGGTCGCG
CGTGCGAGGTGCAGGAGGAGGTGTTCCTCAAGGCCCGGCTCCCCGGCGCC
CAGGCCTACACGGTAGAGCTGGAGAGGTATCGGTCGGCGGTTGTGGGAGG
ACCGGCGTTGAGAGCGGTGGCCGAGGGTGGTGGGGGCCGAGGAAACGGCG
CCGGCGCAGGGGGCGGTGGCGGGGGAATGGACGGAGAGTTGTGGCGGCTG
TTTGCCGCTCGGGAGACGCGGTTGTACAGCTCGTCGGCCGCCTTGGGGAA
GAAGCCCGGGAGGATCTACGTGACGTACGACACGCTATGGTTCCATTCGA
AGGGAGCGCGACACCATGATCCTGCGGCAGCTGCTAGAGCCCAAGTACCG
GGCCGCTGGCGCAGCTCCTCCGGCCGTGCCCACCTGGGCCGGTCGACGAA
GCCTCGGAGCGAGGGACGCGTATTGGCTGGGACCGGCATCGGCAGCGGCC
ACAGCGGCCGGAAACCAACGGGTTGCTGCGCTGGTGCGCTCGTCCCCGCT
GTTCGTCGTCGACGGGAAGGCGGCCAAGGCGAGGGTGGTGGCGAAGAAGC
AGAAGAAGCTCGCCGTTGATGCCGCTGAGCCCTGCGACGGCGGCGAGCCC
GAAGTCCGAGGAGACGGCGGCGGGAACGGGGGCGGGGGCGGATCTTCCGC
GGCCGCTGGGGACACGGCCGCGGCCACGGCCACGCCCGCCGCCGGAGGGG
GGCATCGGCGGTACGTCTCGATGGTGCAGGCGGTCGTGAAGACCCTCGCG
GAGGTGATAGGTCGCGCGTGCGAGGTGCAGGAGGAGGTGTTCCTCAAGGC
CCGGCTCCCCGGCGCCCAGGCCTACACGGTAGAGCTGGAGAGGTATCGGT
CGGCGGTTGTGGGAGGACCGGCGTTGAGAGCGGTGGCCGAGGGTGGTGGG
GGCCGAGGAAACGGCGCCGGCGCAGGGGGCGGTGGCGGGGGAATGGACGG
AGAGTTGTGGCGGCTGTTTGCCGCTCGGGAGACGCGGTTGTACAGCTCGT
CGGCCGCCTTGGGGAAGAAGCCCGGGAGGATCTACGTGACGTACGACACG
CTATGGTTCCATTCGAAGGTTCTGGGTTTCGAGAGTAGGCATGTTCTGCC
CCTTGCGGAAGTGCGGTCCGTCACCCTGCTCGGGACGGCGCTCGATCTTT
CAGCAAGCGTCATCCTTGCCACCGAGAGCGGGGGCGTACCCGGGGAGCTC
ATGCTGGTCTTCCCGGGGCAAAAACTCAAGCAAGTGGAGCCGCTTGAGAT
ACTCCTGCGGCAGCTGGTGAGGCTGGCGACGAAAGAACGGGCGGCGGGGG
CGGCGGCGGCGGCACCAGCGGCGGCGGTGACGCCCGAGGGATCGCACGAC
GGGGAGGGGGGAGCAGAGAACACGCAGCAGTTTGAAGTATGAGTTCTGGG
TTTCGAGAGTAGGCATGTTCTGCCCCTTGCGGAAGTGCGGTCCGTCACCC
TGCTCGGGACGGCGCTCGATCTTTCAGCAAGCGTCATCCTTGCCACCGAG
AGCGGGGGCGTACCCGGGGAGCTCATGCTGGTCTTCCCGGGGCAAAAACT
CAAGCAAGTGGAGCCGCTTGAGATACTCCTGCGGCAGCTGGTGAGGCTGG
CGACGAAAGAACGGGCGGCGGGGGCGGCGGCGGCGGCACCAGCGGCGGCG
GTGACGCCCGAGGGATCGCACGACGGGGAGGGGGGAGCAGAGAACACGCA
GCAGTTTGAAGTATGA