prot_C-linearis_contig80.15848.1 (polypeptide) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig80.15848.1 vs. uniprot
Match: D7FS22_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS22_ECTSI) HSP 1 Score: 1497 bits (3875), Expect = 0.000e+0 Identity = 969/1380 (70.22%), Postives = 1027/1380 (74.42%), Query Frame = 0
Query: 25 PGLDGQKPK-KGEKAPPSRKNKAWGKSKAKNKDDDGSGAGGARSGLKPVRIKLDKEGRDVILDVLHKLHVAGAGDGADDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGEDFAGRQGHGDFEYDGSFGDMANLTSDLVVNEEALPAVADEGARTASAGPAKSGSASKKSPPKTGAKERQEQEQVKNPLLGXXXXXXXXXXSKGAA---RSNVTREKLLASMVQEDRKTSRETQKGIGAVPSAAIHAASTVGGGAVSGAVARGYQRPDPPGAGKGNDKVRLGVCGENKKTGAPDLNGKKILVFDRKDPIQKVLNTSCRKLHIKKKAKGAALLEDEEVAEWLSDLSWVPNGSVVLISCAGAPGSKATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALALAALGRIRESYRTRAKEWQSAATGRARS-DASDPEAGKRMLDKRREVESTAQSRQMMTQRQGLPAYLQREDIVETIRDNQVVVLSGETGCGKTTQVPQFVLDDFIDQGDGGKCNIICTQPRRISAVGVAGRVASERCEKVGGTVGYQIRLDSRVGPSTRLTFCTTGILLRRLTSDDTLAGVSHIMVDEVHERDLQTDFLLVILRDLLPKRPDLRVVLMSATLQARIIADLFTKYFHDCPSITIPGRTFPVEITYMDDVNRVLRGGKTPAVMPRVSSRAGPVVGRGNGRRNGGAQASTGGRGPGGRGHPAAAGAAKG-------------GERDDDPTTMAYDPLTVEPLELDRDGXXXXXXXXXXXASVSPKCEDKVDYDIMVDLVDHIMKTEGNGXXXXXXXXXXXXXXXXXXXXXXX----------RDDRQGQRRXXXXXXXXXXXXXXXWXXXXXXXSRGEAARAGDGSDEPLGAILIFLPGFAEIDQLVKALERHPRIGRGSRVFPLHSSLPAHQQRSIFQRMPPGVRKIVVSTNIAETSLTIDDCTHVIDAGRVREMRYDPITRMSCLVEVWISKASGSQRAGRAGRVRAGKCWRLYPEAFHQNFMPPHTLAEMLRTPLEELVLQILLLELGSPAEFLDRAVEPPPPKMLRAALRNLYDLQAIIISKSTPILTPLGYHLAHLPVDACVGKLLLIAAILQCLDPILTIAAALSDKAPFQRPFGEQARADKARQGFAQGKSDHLAIVEAFGAWRNKRRTNSYDGVRRWCRENFLSHPTLERLDSLREQFRQQLAEVGFASSAVPSRHRASGRDAAAGSSSGGVGGTGDTNGRWRRGGGEGPGKVAAVAWEGEDGGSGPGLEDPDMNSGNLKLVQSVLVAGLYPHVAAFVRPDRQSKT-RQVKKAHFVTRDDSEPVFMHPSSVNHQRFANAAESGRQ 1375
PG +G +PK KG KAP SRKNKAWGKSKAKNKD D G GLKPVR+KLD+EGRD ILD+LHKLHVAGA D A+D XXXXXXXXXXXX XXXXXXXXXX + RQ HGDFEYDGSFGDMANL S LVVN+ A A +A A SA P KERQ XXXXXXXXXX RSNVTREKLLASMVQEDRKTS++ + G V SAAIHAASTVGGG VSGAVARGYQRPDPPGAGKGNDKVRL VCGE+KKTGAPDLNGKKILVFDRK+P+ LNT KLHIKKKAKGAAL+E EEV +WLSDLSWVPNG+VVLISC G+ T XXXXXXXXXXXXXXXXXXXXX XXXXXX A+ALAALGRIRE+YR RA+E QS A G AR D SD EAGKRM+DKRREVESTAQSRQMM QR+ LPAYLQREDIV+TIRDNQVVVLSGETGCGKTTQVPQFVLDD IDQG+GGKCNIICTQPRRISAVGVA RVASERCE+VGGTVGYQIRLDSRVGPSTRLTFCTTGILLRRLTSDDTLAGVSH+MVDEVHERDLQTDFLLVILRDLLPKRPDLRVVLMSATLQA DLFTKYFHDCP+IT+PGRTFPVE+TYMD+VNR++RG +TPA+MPRVSS AG V GRG+GR GA A P E DD T AYDPLT EPLEL D A VSPKCEDKVDYD+MVDLVDHIM+TEG+G XXXXXXXXX XXXX RDDRQ XXXXXXXXWXXXXXXX A G EPLGAILIFLPGFAEIDQLVKAL+RHPRIGRG+RVFPLHSSLP++QQ+SIFQRMP GVRKIVVSTNIAETS+TIDDCTHVIDAGRVREMRYDP+TRMSCLVEVWISKASGSQRAGRAGRVRAGKCWRLYPEAFHQ++MP HTLAEMLRTPLEELVLQ+LLLELGSPAEFLDRAVEPPPPKMLRAALRNL DLQAIIIS STPILTPLGYHLAHLP+DACVGKLLLIAAILQCLDPILTIAAALSDKAPFQRPFGEQARADKARQGFAQGKSDHLAIVEAFGAWRNKRRT+SYD VRRWCRE FLS PTLE SGPGL+DPD+NSGN LVQSVLVAGLYPHVAAFVRPDR S+T RQ+KK HFVTRDDSEPVFMHPSSVNH+RFA+AAESGRQ
Sbjct: 29 PGPEGIEPKNKGNKAP-SRKNKAWGKSKAKNKDGDDDNTRGG--GLKPVRLKLDEEGRDAILDILHKLHVAGAEDSAEDETDGSXXXXXXXXXXXXEAGGXXXXXXXXXXGSDADV--------EIDDRQDHGDFEYDGSFGDMANLMSGLVVNDSAP-------AESAVFMEASKSSAGNSLPMPGATKERQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSNVTREKLLASMVQEDRKTSKQAPREAGGVSSAAIHAASTVGGGPVSGAVARGYQRPDPPGAGKGNDKVRLEVCGESKKTGAPDLNGKKILVFDRKEPLLGFLNTCRGKLHIKKKAKGAALVEGEEVVDWLSDLSWVPNGAVVLISCTS--GAGGTKEKAPVATXXXXXXXXXXXXXXXXXXXXXSKHDGGEISAAPPEAGGEGERQXXXXXXXAVALAALGRIRETYRARARERQSGAAGHARGGDVSDKEAGKRMMDKRREVESTAQSRQMMAQRRNLPAYLQREDIVKTIRDNQVVVLSGETGCGKTTQVPQFVLDDLIDQGEGGKCNIICTQPRRISAVGVADRVASERCERVGGTVGYQIRLDSRVGPSTRLTFCTTGILLRRLTSDDTLAGVSHVMVDEVHERDLQTDFLLVILRDLLPKRPDLRVVLMSATLQA----DLFTKYFHDCPAITVPGRTFPVEVTYMDEVNRLVRGTRTPAIMPRVSSGAGVVGGRGHGRXXXGALAD-----------PXXXXXXXXXXXXXXXXXXXXXSEADDGETPAAYDPLTGEPLELGEDDGATSAAAAAS-AMVSPKCEDKVDYDVMVDLVDHIMRTEGDGGSRXXXXXXXXXQNIFSNRXXXXXXXXXXXXXXRDDRQ-------RGGVXXXXXXXXWXXXXXXXXXXXAG-GNSGETEPLGAILIFLPGFAEIDQLVKALQRHPRIGRGARVFPLHSSLPSNQQKSIFQRMPAGVRKIVVSTNIAETSVTIDDCTHVIDAGRVREMRYDPLTRMSCLVEVWISKASGSQRAGRAGRVRAGKCWRLYPEAFHQSYMPTHTLAEMLRTPLEELVLQVLLLELGSPAEFLDRAVEPPPPKMLRAALRNLDDLQAIIISNSTPILTPLGYHLAHLPMDACVGKLLLIAAILQCLDPILTIAAALSDKAPFQRPFGEQARADKARQGFAQGKSDHLAIVEAFGAWRNKRRTSSYDEVRRWCREKFLSQPTLE---------------------------------------------------------------------------SGPGLQDPDLNSGNTALVQSVLVAGLYPHVAAFVRPDRHSRTPRQIKKGHFVTRDDSEPVFMHPSSVNHERFASAAESGRQ 1289
BLAST of mRNA_C-linearis_contig80.15848.1 vs. uniprot
Match: K8ZAB1_NANGC (Helicase domain-containing protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8ZAB1_NANGC) HSP 1 Score: 550 bits (1417), Expect = 3.850e-174 Identity = 340/787 (43.20%), Postives = 459/787 (58.32%), Query Frame = 0
Query: 467 IRESYRTRAKEWQSAATGRARSDAS--DPEAGKRMLDKRRE-VESTAQSRQMMTQRQGLPAYLQREDIVETIRDNQVVVLSGETGCGKTTQVPQFVLDDFIDQGDGGKCNIICTQPRRISAVGVAGRVASERCEKVGGTVGYQIRLDSRVGPSTRLTFCTTGILLRRLTSDDTLAGVSHIMVDEVHERDLQTDFLLVILRDLLPKRPDLRVVLMSATLQARIIADLFTKYFHDCPSITIPGRTFPVEITYMDDVNRVLRGGKTPAVMPRVSSRAGPVVGRGNGRRNGGAQASTGGRGPGGRGHPAAAGAAKGGERDDDPTTMAYDPLTVEPLELDRDGXXXXXXXXXXXAS----VSPKCEDKVDYDIMVDLVDHIMKTEGNGXXXXXXXXXXXXXXXXXXXXXXXRDDRQGQRRXXXXXXXXXXXXXXXWXXXXXXXSRGEAARAGDGSDEPLGAILIFLPGFAEIDQLVKALERHPRIGRGSRV--FPLHSSLPAHQQRSIFQRMPPGVRKIVVSTNIAETSLTIDDCTHVIDAGRVREMRYDPITRMSCLVEVWISKASGSQRAGRAGRVRAGKCWRLYPEAFHQNFMPPHTLAEMLRTPLEELVLQILLLELGSPAEFLDRAVEPPPPKMLRAALRNLYDLQAIIISKSTPI------LTPLGYHLAHLPVDACVGKLLLIAAILQCLDPILTIAAALSDKAPFQRPFGEQARADKARQGFAQGKSDHLAIVEAFGAWRNKRRTNSYDGVRRWCRENFLSHPTLERLDSLREQFRQQLAEVGF 1238
I+E YR RA + AA G+ R + S + EA RML +R E V T R+M+ R+ LP + RE++V + +N V+VLSG TG GK+TQVPQF+LD +I+ G G + NI+ TQPRRISA+ + RVA+ERC +VG VGY IRL++RV ST LTF TTG+LLRRL D L GVSH+++DEVHERD+ +DFLL+I+++LL +R L+++LMSATLQA DLF +YF +CP++ +PGRTFPV +++D+ L K+ +P +S GRG G R G G E +L + +SPK ED +DY ++V L+ ++ R D +E GA+L+F GF EI++L K + H +G RV +PLHSSLP+ QR++F+RMP GV KIVV+TNIAETS+TIDD + VID+GRV+EMRYD T MS LV VW S+A+ SQRAGRAGRVR G C+RLY ++F + MP +TL EMLRTPLEEL L IL LELGSPA+FL RA+EPPPP+ + A++NL ++ A+ K L PLG+HLA+LP DA +GK+L+I +IL CL+PILTIAA LS K+PF PFG Q AD+A + SDH+A +EA+ W R Y + +C ENFLS TLE++++LR++ R+QL ++GF
Sbjct: 63 IKEGYRVRAI--RRAAGGKKRHERSPAESEALSRMLKQRLERVMETRGYREMLWARERLPIWSMREEVVRLVEENTVIVLSGATGSGKSTQVPQFLLDHYIEGGRGSQVNILVTQPRRISAISLCERVAAERCVEVGRDVGYSIRLEARVSDSTALTFVTTGLLLRRLQEDPDLQGVSHVVIDEVHERDIHSDFLLIIMQELLERRKGLKLILMSATLQA----DLFQEYFGNCPAVHVPGRTFPVRHVFLEDIEAKLASVKS---VPGMSQGGVGGNGRGGGXRGXGR-----------------------GXXXXXXXXXXXXXXXKEHRQLSNGSLKGIGNENGNGVAGPPLISPKAEDPIDYQLIVKLLTLLV-----------------------------------------------------------------TIREAD-DNEVGGAVLVFFSGFQEINELCKLMAAHAVLGNPKRVQAYPLHSSLPSDAQRAVFRRMPKGVTKIVVATNIAETSITIDDISSVIDSGRVKEMRYDAETHMSSLVSVWTSQAAASQRAGRAGRVREGTCFRLYSKSFMEAQMPKYTLPEMLRTPLEELSLTILALELGSPADFLARAIEPPPPEAISTAVKNLREIDALRKQKDLDTKEVSYYLMPLGFHLANLPCDARIGKMLIIGSILGCLEPILTIAACLSYKSPFSNPFGMQQEADRAHAKYGSALSDHIAALEAYNGWAELR-NEPYRVRKDYCTENFLSIATLEQIEALRKELRRQLIDIGF 750
BLAST of mRNA_C-linearis_contig80.15848.1 vs. uniprot
Match: W7TVU1_9STRA (Atp-dependent rna helicase dhx57 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVU1_9STRA) HSP 1 Score: 561 bits (1445), Expect = 1.970e-172 Identity = 376/939 (40.04%), Postives = 516/939 (54.95%), Query Frame = 0
Query: 467 IRESYRTRAKEWQSAATGRARSDAS--DPEAGKRMLDKRRE-VESTAQSRQMMTQRQGLPAYLQREDIVETIRDNQVVVLSGETGCGKTTQVPQFVLDDFIDQGDGGKCNIICTQPRRISAVGVAGRVASERCEKVGGTVGYQIRLDSRVGPSTRLTFCTTGILLRRLTSDDTLAGVSHIMVDEVHERDLQTDFLLVILRDLLPKRPDLRVVLMSATLQARIIADLFTKYFHDCPSITIPGRTFPVEITYMDDVNRVLRGGKTPAVMPRVSSRAGPVVGRGNGRRNGGAQASTGGRGPGGRGHPAAAGAAKGGERDDDPTTMAYDPLTVEPLELDRDGXXXXXXXXXXXAS----VSPKCEDKVDYDIMVDLVDHIMKTEGNGXXXXXXXXXXXXXXXXXXXXXXXRDDRQGQRRXXXXXXXXXXXXXXXWXXXXXXXSRGEAARAGDGSDEPLGAILIFLPGFAEIDQLVKALERHPRIGRGSRV--FPLHSSLPAHQQRSIFQRMPPGVRKIVVSTNIAETSLTIDDCTHVIDAGRVREMRYDPITRMSCLVEVWISKASGSQRAGRAGRVRAGKCWRLYPEAFHQNFMPPHTLAEMLRTPLEELVLQILLLELGSPAEFLDRAVEPPPPKMLRAALRNLYDLQAIIISKSTPI------LTPLGYHLAHLPVDACVGKLLLIAAILQCLDPILTIAAALSDKAPFQRPFGEQARADKARQGFAQGKSDHLAIVEAFGAWRNKRRTNSYDGVRRWCRENFLSHPTLERLDSLREQFRQQLAEVGFASSAVPSRHRASGRDAAAGSSSGGVGGT------------GDTNGRWRRGGGEGPGKVAAVAWEGEDGGS----GPGLEDPDMNSGNLKLVQSVLVAGLYPHVAAFVRPDRQSKTRQVKKAHFVTRDDSEPVFMHPSSVNHQRFANAAESGR 1374
I+E YR RA + AA G+ R + S + EA RML +R E V T R+M+ R+ LP + RE++V + +N V+VLSG TG GK+TQVPQF+LD +I+ G G + NI+ TQPRRISA+ + RVA+ERC +VG VGY IRL++RV ST LTF TTG+LLRRL D L GVSH+++DEVHERD+ +DFLL+I+++LL +R L+++LMSATLQA DLF +YF +CP++ +PGRTFPV +++D+ L K+ +P +S GRG G R G G E +L + +SPK ED +DY ++V L+ ++ R D +E GA+L+F GF EI++L K + H +G RV +PLHSSLP+ QR++F+RMP GV KIVV+TNIAETS+TIDD + VID+GRV+EMRYD T MS LV VW S+A+ SQRAGRAGRVR G C+RLY ++F + MP +TL EMLRTPLEEL L IL LELGSPA+FL RA+EPPPP+ + A++NL ++ A+ K L PLG+HLA+LP DA +GK+L+I +IL CL+PILTIAA LS K+PF PFG Q AD+A + SDH+A +EA+ W R Y + +C ENFLS TLE++++LR++ R+QL ++GF + P + GR AA + G + + + R + EDG + G G + + ++ L++ L A LYP V VRP + + A F RD ++ V +HP S+N R N A SG+
Sbjct: 290 IKEGYRVRAI--RRAAGGKKRHERSPAESEALSRMLKQRLERVMETRGYREMLWARERLPIWSMREEVVRLVEENTVIVLSGATGSGKSTQVPQFLLDHYIEGGRGSQVNILVTQPRRISAISLCERVAAERCVEVGRDVGYSIRLEARVSDSTALTFVTTGLLLRRLQEDPDLQGVSHVVIDEVHERDIHSDFLLIIMQELLERRKGLKLILMSATLQA----DLFQEYFGNCPAVHVPGRTFPVRHVFLEDIEAKLASVKS---VPGMSQGGVGGNGRGGGXRGXGR-----------------------GXXXXXXXXXXXXXXXKEHRQLSNGSLKGIGNENGNGVAGPPLISPKAEDPIDYQLIVKLLTLLV-----------------------------------------------------------------TIREAD-DNEVGGAVLVFFSGFQEINELCKLMAAHAVLGNPKRVQAYPLHSSLPSDAQRAVFRRMPKGVTKIVVATNIAETSITIDDISSVIDSGRVKEMRYDAETHMSSLVSVWTSQAAASQRAGRAGRVREGTCFRLYSKSFMEAQMPKYTLPEMLRTPLEELSLTILALELGSPADFLARAIEPPPPEAISTAVKNLREIDALRKQKDLDTKEVSYYLMPLGFHLANLPCDARIGKMLIIGSILGCLEPILTIAACLSYKSPFSNPFGMQQEADRAHAKYGSALSDHIAALEAYNGWAELR-NEPYRVRKDYCTENFLSIATLEQIEALRKELRRQLIDIGFGAG-EPRKMYGGGRGAAGRAGQPGXXXXXXXXXXXXXXXRSNDDEKCRDNQSHKSARAVRAGANDEDGHTVDDIGGGSDGKGTPALDVNLIRCCLFAALYPQVGKLVRPQKTGEG-----ATFELRDKTK-VAVHPGSINFTRLMNLAPSGK 1122
BLAST of mRNA_C-linearis_contig80.15848.1 vs. uniprot
Match: W7T633_9STRA (Putative atp-dependent rna helicase dhx36 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T633_9STRA) HSP 1 Score: 549 bits (1415), Expect = 6.900e-168 Identity = 353/874 (40.39%), Postives = 480/874 (54.92%), Query Frame = 0
Query: 518 QRQGLPAYLQREDIVETIRDNQVVVLSGETGCGKTTQVPQFVLDDFIDQGDGGKCNIICTQPRRISAVGVAGRVASERCEKVGGTVGYQIRLDSRVGPSTRLTFCTTGILLRRLTSDDTLAGVSHIMVDEVHERDLQTDFLLVILRDLLPKRPDLRVVLMSATLQARIIADLFTKYFHDCPSITIPGRTFPVEITYMDDVNRVL---RGGKTPAVMPRVSSRAGPVVGRGNGRRNGGAQAST---GGRGPGGRGHPAAAGAAKGGERDDDPTTMAYDPLTVEPLELDRDGXXXXXXXXXXXASVSPKCEDKVDYDIMVDLVDHIMKTEGNGXXXXXXXXXXXXXXXXXXXXXXXRDDRQGQRRXXXXXXXXXXXXXXXWXXXXXXXSRGEAARAGDGSDEPLGAILIFLPGFAEIDQLVKALERHPRIGRGSR--VFPLHSSLPAHQQRSIFQRMPPGVRKIVVSTNIAETSLTIDDCTHVIDAGRVREMRYDPITRMSCLVEVWISKASGSQRAGRAGRVRAGKCWRLYPEAFHQNFMPPHTLAEMLRTPLEELVLQILLLELGSPAEFLDRAVEPPPPKMLRAALRNLYDLQAIIISKSTP------ILTPLGYHLAHLPVDACVGKLLLIAAILQCLDPILTIAAALSDKAPFQRPFGEQARADKARQGFAQGKSDHLAIVEAFGAWRNKRRTNSYDGVRR--WCRENFLSHPTLERLDSLREQFRQQLAEVGFASSAVPSRHRASGRDAAAGSSSGGVGGTGDTNGRWRRGGGEGPGKVAAVAWEGEDGGSGPGLEDPDMNSGNLKLVQSVLVAGLYPHVAAFVRPDRQSKTRQVKKAHFVTRDDSEPVFMHPSSVNHQRFANAAESGRQ 1375
QR LPA+ QRE I+E + +QVVV+ GETG GKTTQ+PQF+LDD+ +G GG+CNI+CTQPRRISA+GVA RVA ER EKVG TVGY +R ++R P TRL FCTTG+LLRRL D LAGVSH++VDEVHER L++DFLL++L+DLL RP+L+VVLMSATLQA LF+ YF + P + IPGR F V Y+DDV ++ RG P PR S RAG RG R G A+ S+ G P H A KG E +D + E ++ + +P +DY+++ L +++ G+ +++ G GA+LIFLPG +EI++ ++ +++ + R +F LHSS+P QR+IF++M GV KIVV+TNIAETS+T+ D THVID GR ++ YDP T M+ L EVW S+AS QRAGRAGRVR G C+RLY E+F Q+ M PH E+ R LE L+L ILLLELG P FL RAVEPP PK ++A+L+ L D++A+ + P +L PLG+HLA LPVD +GK+L+ A++ C+DPILTIAAA S ++PF P G++ A A+Q FA+ KSDHLA+V + AW+ R D R + + NF+S LE +D+ R + L + GFA A A+ + A+ D D N + +L++ +L+ GL P +A VRP R + AHF+T+D + V +HPSSVN +R + A G +
Sbjct: 417 QRASLPAFSQREAILEAVAAHQVVVVEGETGSGKTTQLPQFILDDWSARGKGGECNIVCTQPRRISAIGVAERVAEERLEKVGETVGYSVRFNTRRSPQTRLLFCTTGVLLRRLAYDKDLAGVSHVLVDEVHERTLESDFLLIVLKDLLACRPELKVVLMSATLQA----SLFSSYFDNSPCLHIPGRAFQVSQLYLDDVEELVAGRRGPGRPRAAPRAS-RAGSHFARGRTDRGGMARKSSEPCDGE-PLSHSHTARNSTGKGEETEDG----------QDGDETLKEDFGAEGARQLRMSFSTPSDRVAIDYELIAKLTRRLVEDFGD------------------------KNEEDGG-----------------------------------------GAVLIFLPGLSEIERSIRTMKQDALLSDKKRACIFALHSSMPTEAQRAIFRKMEAGVCKIVVATNIAETSITVTDVTHVIDTGREKQTGYDPYTHMTSLREVWTSQASAKQRAGRAGRVRPGICYRLYTESFMQDNMAPHAPPEIRRVLLENLILTILLLELGPPEAFLQRAVEPPSPKAVKASLQVLLDIEAVALGPPLPNGSRAIVLNPLGFHLASLPVDCRLGKMLVFASLFACVDPILTIAAAFSSRSPFVAPIGKREEAQLAKQRFAEDKSDHLALVALWKAWK---RVKDGDTTARKAFAKANFVSIAALEEIDATRSKLYDDLVKCGFAPCATAESQSATK-------------------------------SLQAI--------------DYDSNENDKRLLRCILLCGLTPQIAKLVRPTRG------RGAHFITKDPTLDVAIHPSSVNAKRISQAGSDGNE 1155
BLAST of mRNA_C-linearis_contig80.15848.1 vs. uniprot
Match: A0A835Z4K1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4K1_9STRA) HSP 1 Score: 490 bits (1262), Expect = 1.410e-148 Identity = 397/1097 (36.19%), Postives = 530/1097 (48.31%), Query Frame = 0
Query: 310 DKVRLGVCGENKKTGAPDLNGKKILVFDRKDPIQKVLNTSCRKLHIKKKAKGAALLEDEEVAEWLSDLSWVPNGSVVLISCAGAPGSKATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALALAALGRIRESYR--TRAKEWQSAATGRARSDASDPEAGKRMLDKRREVESTAQSRQMMTQRQGLPAYLQREDIVETIRDNQVVVLSGETGCGKTTQVPQFVLDDFIDQGDGGKCNIICTQPRRISAVGVAGRVASERCEKVGGTVGYQIRLDSRVGPSTRLTFCTTGILLRRLTSDDTLAGVSHIMVDEVHERDLQTDFLLVILRDLLPKRPDLRVVLMSATLQARIIADLFTKYFHDCPSITIPGRTFPVEITYMDDVNRVL---RGGKTPAVMPRVSSRAGPVVGRGNGRRNGGAQASTGGRGPGGRGHPAAAGAAKGGERDDDPT-TMAYDPLTVEPLELDRDGXXXXXXXXXXXASVSPKCEDKVDYDIMVDLVDHIMKTEGNGXXXXXXXXXXXXXXXXXXXXXXXRDDRQGQRRXXXXXXXXXXXXXXXWXXXXXXXSRGEAARAGDGSDEPL-GAILIFLPGFAEIDQLVKALERHPRIGRGSRVFPLHSSLPAHQQRSIFQRMPPGVRKIVVSTNIAETSLTIDDCTHVIDAGRVREMRYDPITRMSCLVEVWISKASGSQRAGRAGRVRAGKCWRLYPEAFHQNFMPPHTLAEMLRTPLEELVLQILLLELGSPAEFLDRAVEPPPPKMLRAALRNLYDLQAIIISKST--PILTPLGYHLAHLPVDACVGKLLLIAAILQCLDPILTIAAALSDKAPFQRPFGE--QARADKARQGFAQGK-SDHLAIVEAFGAWRNK-RRTNSYDG----VRRWCRENFLSHPTLERLDSLREQFRQQLAEVGFASSAVPSRHRASGRDAAAGSSSGGVGGTGDTNGRWRRGGGEGPGKVAAVAWEGEDGGSGPGLEDPDMNSGNLKLVQSVLVAGLYPHVAAFVRPDR-----QSKTRQV--------KKAHFVTRDDSEPVFMHPSSVNHQRFANAAE-SGRQ 1375
+ VR+ VC E KK G P++ K++V R P+ + + + KL IKKK K L+++ V +WL+DLS V + + +S GA +K XXXXXXXXXXXXXXXXXX ++ AA+ R++ SY+ + +++ Q AA + A + + + E +A+ +QMM QRQ LP Y RE+++E I +NQVVV+ GETG TVGY+IRL+SR +TRLTFCTTG+LLRRLT+D L G++H++VDEVHER L+TDFLL+IL+DLLP+RPDL+VVLMSATLQA LFT YF DCP + +PGRTFPV +++D+ + + GG++ + RDD + +DP+T + L G VSP+C+DK+D D + +LV HI+ E G R G + + AA G+G GAIL+F+PG EI++LV L + R+ F LHS+L QQR++FQ MPPG RK+VVSTNIAETS+TI+DCTH FH MP HTL EMLR PLEELVLQ L+LE+G PA L RAV+PPP KML AALRNLY+L+A+ ++ T LTPLGYHLAHLP+DA VGKLL++ A+L+CLDP+LT+AAALS K PF RP G +A A R+ FA G SD LA+V A+ AW + RR NS G ++ WCR+NF++ + + LREQFR+ L GFAS D AA S+ ++GN++L+QSVL AGLYP VA FVRP +S+ R V ++AHF RDD E F+HP S+N +R+ AE SGRQ
Sbjct: 54 EPVRVMVCSE-KKDGVPNVGDSKLVVLQRSAPLGEAMAKAQGKLRIKKKPKALGLVQEGVVVQWLNDLSLVRDDDTLCLSSLGAGKAKTV-------------APRAAPPXXXXXXXXXXXXXXXXXXGDGDAQTLEGTGSGEASIHAEVSNAAIDRLKASYQKLSISRQGQKAAVSAEQVAALSRQLSQAAASR----EGSARHQQMMQQRQSLPVYNFREELLELIDENQVVVVEGETG-----------------------------------------------------TVGYRIRLESRASAATRLTFCTTGVLLRRLTTDGGLDGITHVLVDEVHERGLETDFLLIILKDLLPRRPDLKVVLMSATLQA----SLFTDYFGDCPCLKVPGRTFPVTTLHLEDIGKAIGRPMGGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXAP--------------------PRDDGTEGAVVFDPITGQQLS----GAEARAAGGSQAPLVSPQCQDKLDLDEIAELVAHIVDCESRGTDVTG---------------------RSGAK-----------------------GGKPRAAWGGEGGXXXXXGAILVFMPGTLEINRLVSMLRQDRRLSNCCEAFALHSALSPDQQRAVFQVMPPGRRKVVVSTNIAETSITIEDCTH-----------------------------------------------------FHATAMPEHTLPEMLRCPLEELVLQTLILEIGDPASVLARAVQPPPEKMLHAALRNLYELEAVQVAPDTLETSLTPLGYHLAHLPMDARVGKLLIMGALLRCLDPVLTVAAALSSKTPFVRPMGSAAEAAATDVRKRFAGGNCSDSLAVVAAYKAWDAECRRVNSSSGTCPRMKMWCRDNFINSNAMALMAGLREQFREHLVAAGFASV-----------DRAADSA----------------------------------------------HAGNVRLLQSVLCAGLYPQVAWFVRPKANGSAGESRWRVVGGSAAVGTQRAHFALRDDPEAAFVHPGSINAERYRGQAEASGRQ 897
BLAST of mRNA_C-linearis_contig80.15848.1 vs. uniprot
Match: C1FF88_MICCC (RNA helicase n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1FF88_MICCC) HSP 1 Score: 486 bits (1250), Expect = 2.140e-148 Identity = 337/861 (39.14%), Postives = 448/861 (52.03%), Query Frame = 0
Query: 518 QRQGLPAYLQREDIVETIRDNQVVVLSGETGCGKTTQVPQFVLDDFIDQGDGGKCNIICTQPRRISAVGVAGRVASERCEKVGG---TVGYQIRLDSRVGPSTRLTFCTTGILLRRLTSDDTLAGVSHIMVDEVHERDLQTDFLLVILRDLLPKRPDLRVVLMSATLQARIIADLFTKYFHDCPSITIPGRTFPVEITYMDDVNRVLRGGKTPAVMPRVSSRAGPVVGRGNG-RRNGGAQASTGGRGPGGRGHPAAAGAAKGGERDDDPTTMA-YDPLTVEPLE----LDRDGXXXXXXXXXXXASVSPKCEDKVDYDIMVDLVDHIMKTEGNGXXXXXXXXXXXXXXXXXXXXXXXRDDRQGQRRXXXXXXXXXXXXXXXWXXXXXXXSRGEAARAGDGSDEPLGAILIFLPGFAEIDQLVKALERHPRI----GRGSRVFPLHSSLPAHQQRSIFQRMPPGVRKIVVSTNIAETSLTIDDCTHVIDAGRVREMRYDPITRMSCLVEVWISKASGSQRAGRAGRVRAGKCWRLYPEAFHQNFMPPHTLAEMLRTPLEELVLQILLLEL-GSPAEFLDRAVEPPPPKMLRAALRNLYDLQAIIISKSTPILTPLGYHLAHLPVDACVGKLLLIAAILQCLDPILTIAAALSDKAPFQRPFGEQARADKARQGFAQGKSDHLAIVEAFGAWRNKRRTNSYDGVRRWCRENFLSHPTLERLDSLREQFRQQLAEVGFASSAVPSRHRASGRDAAAGSSSGGVGGTGDTNGRWRRGGGEGPGKVAAVAWEGEDGGSGPGLEDPDMNSGNLKLVQSVLVAGLYPHVAAFVRPDRQSKTRQVKKAHFVTRDDSEPVF-MHPSSVNH 1363
QR+ LPA+ +RE+++E +R NQVV+++GETGCGKTTQ+PQF+LDD I + +GG+C++ICTQPRRISA VA RVA ER EK+G TVGY+IRL+S STR+ F TTG+LLRRL D LAGVSH++VDEVHER L +DFLLV+LRD+LP RP LRVVLMSATL A F YF TIPG T PV+ Y++D+ +V G V RG+ RN + T G +RD D T A + P E L R G S +DYD++ LV+H+ S EP GAIL+F+PG AEI +L ++L +P + G G + LHS+L +QR+IF+ P RKIV++TNIAETS+TIDD +V+D+G+ +E YDP TRM L+E W+S+AS QR GRAGRVR G+C+R+Y H HT+ E+ R PLE L LQI L + G A FL +A+EPP +++A++ L + A+ ++ LT LG HLA LPVD VGK+LL A+L CL P+LTIAA L ++PF P ++ AD A++ FA+ +SDHL + AF AW + R + R+NFLS TLE + LR QF Q L E GF G RW R G P P D + NS N +LV++VLVAGLYP++ P + S K H+++ + E + +HPSSVN+
Sbjct: 68 QRKRLPAWSKREELLEAVRANQVVIVAGETGCGKTTQLPQFILDDAIARNEGGRCSLICTQPRRISATSVASRVAQERGEKLGAKGTTVGYKIRLESVASESTRILFVTTGVLLRRLAEDPLLAGVSHVIVDEVHERSLDSDFLLVLLRDVLPHRPTLRVVLMSATLNAAA----FGAYFAGAAVATIPGFTHPVQEHYLEDILQV----------------TGYVPDRGSDCMRNSKGNSGT-----------------NGDKRDGDKTAGASHRPHPAREAEFIAALSRRGYLPSVCDALRAIDQSV-----IDYDLVTRLVEHVCA-----------------------------------------------------------------------SMEP-GAILVFMPGLAEISKLHESLGTNPTVRAATGNGKYLIGLHSTLSTAEQRTIFEHPPGDTRKIVIATNIAETSITIDDVVYVVDSGKCKENGYDPNTRMQLLLERWVSRASAKQRRGRAGRVRPGRCFRVYTRQMHDEVFDEHTMPEIKRVPLEGLCLQIQLQRMSGGIAGFLGKALEPPEEDSIKSAIKTLRQIGALDEKEN---LTSLGQHLASLPVDVRVGKMLLYGAVLGCLGPVLTIAAVLGGRSPFVAPLDKREDADAAKRMFAEDQSDHLTNLNAFNAWLDARALGK-GAEMAFTRDNFLSFRTLEGIADLRAQFAQLLHEAGF---------------------------LGTDGKRWGRRGAPPP--------------DDPIWLDANRNSNNTRLVKAVLVAGLYPNLVKVGTPHKPSAP---PKLHYLSDEGKEEMLQVHPSSVNY 766
BLAST of mRNA_C-linearis_contig80.15848.1 vs. uniprot
Match: A0A061S817_9CHLO (RNA helicase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S817_9CHLO) HSP 1 Score: 484 bits (1247), Expect = 8.000e-148 Identity = 330/868 (38.02%), Postives = 457/868 (52.65%), Query Frame = 0
Query: 508 STAQSRQMMTQRQGLPAYLQREDIVETIRDNQVVVLSGETGCGKTTQVPQFVLDDFIDQGDGGKCNIICTQPRRISAVGVAGRVASERCEKVGGTVGYQIRLDSRVGPSTRLTFCTTGILLRRLTSDDTLAGVSHIMVDEVHERDLQTDFLLVILRDLLPKRPDLRVVLMSATLQARIIADLFTKYFHDCPSITIPGRTFPVEITYMDDVNRVLRGGKTPAVMPRVSSRAGPVVGRGNGRRNGGAQASTGGRGPGGRGHPAAAGAAKGGERDDDPTTMAYDPLTVEPLELDRDGXXXXXXXXXXXASVSPKCEDKVDYDIMVDLVDHIMKTEGNGXXXXXXXXXXXXXXXXXXXXXXXRDDRQGQRRXXXXXXXXXXXXXXXWXXXXXXXSRGEAARAGDGSDEPLGAILIFLPGFAEIDQLVKALERHPRIGRGSR--VFPLHSSLPAHQQRSIFQRMPPGVRKIVVSTNIAETSLTIDDCTHVIDAGRVREMRYDPITRMSCLVEVWISKASGSQRAGRAGRVRAGKCWRLYPEAFHQNFMPPHTLAEMLRTPLEELVLQILLLELGSPAEFLDRAVEPPPPKMLRAALRNLYDLQAIIISKSTPILTPLGYHLAHLPVDACVGKLLLIAAILQCLDPILTIAAALSDKAPFQRPFGEQARADKARQGFAQG-KSDHLAIVEAFGAWRNKRRTNSYDGVRRWCRENFLSHPTLERLDSLREQFRQQLAEVGFASSAVPSRHRASGRDAAAGSSSGGVGGTGDTNGRWRRGGGEGPGKVAAVAWEGED------GGSGPGLEDP----DMNSGNLKLVQSVLVAGLYPHVAAFVRPDRQSKTRQVKKAHFVTRDDSEPVFMHPSSVN 1362
ST + ++M R+ LPA+ ++ ++V + +QVVV+SGETGCGKTTQ+PQF+L++ I G G C IICTQPRRISA+ VA RVA ER E++G VGYQIRL+SR TRL FCT+G++LRRL D L GVSHI+VDE+HER + DFLL+ILRDLLP+RPDLRVVLMSATL A DLF YF CP + IPG TFPVE +++D + R P P S GR G + + GGRG R AA GG T+ + V E + + K + K+D D++ +V HI + +EP GAIL+F+ G+ +I +L L+ P G SR + PLH S+P Q++IF R P GVRK+++STNIAETS+TIDD +V++ G+ +E YDP+ ++ L+ W SKA+ QR GRAGRV+AGKC+ L P A H + H E+LRTPLEEL LQI L LG FL RA++PP K + A+ L+ + A+ + LTPLG HLAHLPVD +GK++++ AI CL+P+L IAA ++ + PF P ++A AD+ ++ FA G +SDH+AI+ AF WR + R +C +FL+ T++ + + QF L ++GF S H +S TGD+ ++GE+ GS L+ N N +L+++VL AG++P VA+ R + + F TR+D + V HPSSVN
Sbjct: 68 STPKVQRMAEFRKKLPAFGKKAELVAAVASSQVVVVSGETGCGKTTQLPQFILEEEIAAGRGAACGIICTQPRRISAISVAQRVADERGEELGRMVGYQIRLESRRSDDTRLLFCTSGVVLRRLAGDPLLRGVSHIVVDEIHERGMNEDFLLIILRDLLPRRPDLRVVLMSATLNA----DLFCGYFGGCPRLHIPGFTFPVEELFLEDFLDLTRHEIAP---PDQSG----------GRGGGPSSRARGGRG---RLREAAPPQDPGGG------TLGW----VFRAEDYPNAHPSTCRSLAAWQQANSKGDAKLDLDLVAAVVTHICR------------------------------------------------------------------------NEPEGAILVFMTGWDDISKLHDQLKARPLTGDPSRCLLLPLHGSMPTVNQQAIFSRPPQGVRKVILSTNIAETSITIDDIVYVVNGGKTKEKNYDPLNNLATLLPAWTSKAAARQRRGRAGRVQAGKCFHLLPRAMHDRHLLDHQEPELLRTPLEELCLQIKALRLGRVEAFLGRALQPPDQKAVHNAVDLLFTIGALSGDEE---LTPLGEHLAHLPVDPRIGKMMIMGAIFGCLEPVLIIAAGMAHRDPFVLPLEKKAEADRMKKDFAAGSRSDHIAILHAFQGWRRAFEAGGFSAARNYCWRSFLAPNTMQMMQEMVLQFAYLLDDIGFLSGGAHRGHLSSA--------------TGDSG-----------------EYDGEEQHPRQKSGSRDSLKTRIASLSKNQSNTELLRAVLCAGMFPAVASIKRRGKFNV--------FNTREDGK-VEPHPSSVN 790
BLAST of mRNA_C-linearis_contig80.15848.1 vs. uniprot
Match: UPI0010A98998 (putative ATP-dependent RNA helicase DHX57 n=1 Tax=Antrostomus carolinensis TaxID=279965 RepID=UPI0010A98998) HSP 1 Score: 479 bits (1232), Expect = 5.500e-146 Identity = 328/869 (37.74%), Postives = 476/869 (54.78%), Query Frame = 0
Query: 515 MMTQRQGLPAYLQREDIVETIRDNQVVVLSGETGCGKTTQVPQFVLDDFIDQGDGGKCNIICTQPRRISAVGVAGRVASERCEKVGGTVGYQIRLDSRVGPSTRLTFCTTGILLRRLTSDDTLAGVSHIMVDEVHERDLQTDFLLVILRDLLPKRPDLRVVLMSATLQARIIADLFTKYFHDCPSITIPGRTFPVEITYMDDVNRVLRGGKTPAVMPRVSSRAGPVVGRGNGRRNGGAQASTGGRGPGGRGHPAAAGAAKGGE---RDDDPTTMAYDPLTVEPLELDRDGXXXXXXXXXXXASVSPKCEDKVDYDIMVDLVDHIMKTEGNGXXXXXXXXXXXXXXXXXXXXXXXRDDRQGQRRXXXXXXXXXXXXXXXWXXXXXXXSRGEAARAGDGSDEPLGAILIFLPGFAEIDQLVKALERHP----RIGRGSRVFPLHSSLPAHQQRSIFQRMPPGVRKIVVSTNIAETSLTIDDCTHVIDAGRVREMRYDPITRMSCLVEVWISKASGSQRAGRAGRVRAGKCWRLYPEAFHQNFMPPHTLAEMLRTPLEELVLQILLLELGSPAEF---LDRAVEPPPPKMLRAALRNLYDLQAIIISKSTPILTPLGYHLAHLPVDACVGKLLLIAAILQCLDPILTIAAALSDKAPFQRPFGEQARADKARQGFAQGKSDHLAIVEAFGAWRNKRRTNSYDGVRRWCRENFLSHPTLERLDSLREQFRQQLAEVGFASSAVPSRHRASGRDAAAGSSSGGVGGTGDTNGRWRRGGGEGPGKVAAVAWEGEDGGSGPGLEDPDMNSGNLKLVQSVLVAGLYPHVAAFVRPD---RQSKTRQVK------KAHFVTRDDSEPVFMHPSSVNHQ 1364
M+ +RQ LPA+ +RE I++ ++ +QV+V+SG TGCGKTTQ+PQF+LD + G NIICTQPRRISA+ VA RVA ER E++G TVGYQIRL+S +TRL +CTTG+LLRRL D TL G++H++VDEVHER ++DFLL++L+D++ +RPDLR++LMSATL A +LF++YFH CP I IPGRTFPV+ +++DV + R + R ++ + NGR A AG +G + RD DP LT++ L G ++S DKV+ +++ L++ I+ AG S P GA+LIFLPG AEI L + L+ + R + V+PLHSSL + +Q+S+F R P GV KI++STNIAETS+TIDD +VID+G+++E RYDP M L + ++SKA+ QR GRAGRV +G C+ L+ + + + L E+ R PLE+L L+I +LE+ S L + +EPP + L+A+ L DL A+ + LTPLGYHLA LPVD +GKL+L I +CLDP LTIAA+L+ K+PF P+ ++ A+K + FA G SD+LA+++A+ WR + S +CRENFLS L+ + SL+ QF + L+++GF + +R D +W +GG G + A E+ + N+ N+KL+ ++L A LYP+V +P+ +++ T VK + FVT++D V +HPSSVN+Q
Sbjct: 72 MLYERQKLPAWQERETILDLLKSHQVLVVSGMTGCGKTTQIPQFILDASLQGSPSGVANIICTQPRRISAISVAERVAKERTERIGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDLTLQGITHVIVDEVHERTEESDFLLLVLKDIMVQRPDLRIILMSATLNA----ELFSQYFHSCPIINIPGRTFPVDQFFLEDVIAMTRYVLEDSSPYRRKTKQ---ENKQNGRHKRTAFEEV-------EEDLRRAGILEGTDTVVRDSDPDQK----LTLKQLLTRYKGVNKTVLK-----TMSVMDLDKVNLELIEALLEWIV--------------------------------------------------------------------AGKHSYPP-GAVLIFLPGLAEIKMLYEQLQSNALFNNRHSKRCVVYPLHSSLSSEEQQSVFLRPPAGVIKIIISTNIAETSVTIDDVVYVIDSGKMKEKRYDPSKGMESLEDTFVSKANALQRKGRAGRVASGVCFHLFSSHHYNHQLIKQQLPEIQRVPLEQLCLRIKILEMFSAQSLHSVLSQLIEPPRTESLQASKLRLQDLGALTPDEK---LTPLGYHLASLPVDVRIGKLMLFGTIFRCLDPALTIAASLAFKSPFVSPWDKREEANKKKLEFAVGNSDYLALLQAYKGWRLSIKEGSQASYN-YCRENFLSGRVLQEIASLKRQFTELLSDIGFVKEGLRAR---------------------DIEKKWSQGG---DGVLDATG------------EEANSNAENIKLISAMLCAALYPNVVQVKKPEGKYQKTSTGAVKMQPKAEELKFVTKNDG-CVHIHPSSVNYQ 807
BLAST of mRNA_C-linearis_contig80.15848.1 vs. uniprot
Match: UPI001403E682 (putative ATP-dependent RNA helicase DHX57 n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI001403E682) HSP 1 Score: 492 bits (1266), Expect = 1.260e-144 Identity = 336/895 (37.54%), Postives = 484/895 (54.08%), Query Frame = 0
Query: 504 REVESTAQSRQMMTQRQGLPAYLQREDIVETIRDNQVVVLSGETGCGKTTQVPQFVLDDFIDQGDGGKCNIICTQPRRISAVGVAGRVASERCEKVGGTVGYQIRLDSRVGPSTRLTFCTTGILLRRLTSDDTLAGVSHIMVDEVHERDLQTDFLLVILRDLLPKRPDLRVVLMSATLQARIIADLFTKYFHDCPSITIPGRTFPVEITYMDDV----NRVLRGGKTPAVMPRVSSRAGPVVGRGNGRRNGGAQASTGGRGPGGRGHPAAAGAAKGGE-----RDDDPTTMAYDPLTVEP---------LELDRDGXXXXXXXXXXXASVSPKCEDKVDYDIMVDLVDHIMKTEGNGXXXXXXXXXXXXXXXXXXXXXXXRDDRQGQRRXXXXXXXXXXXXXXXWXXXXXXXSRGEAARAGDGSDEPLGAILIFLPGFAEIDQLVKALERHPRIG--RGSR--VFPLHSSLPAHQQRSIFQRMPPGVRKIVVSTNIAETSLTIDDCTHVIDAGRVREMRYDPITRMSCLVEVWISKASGSQRAGRAGRVRAGKCWRLYPEAFHQNFMPPHTLAEMLRTPLEELVLQILLLELGSPAEF---LDRAVEPPPPKMLRAALRNLYDLQAIIISKSTPILTPLGYHLAHLPVDACVGKLLLIAAILQCLDPILTIAAALSDKAPFQRPFGEQARADKARQGFAQGKSDHLAIVEAFGAWRNKRRTNSYDGVRRWCRENFLSHPTLERLDSLREQFRQQLAEVGFASSAVPSRHRASGRDAAAGSSSGGVGGTGDTNGRWRRGGGEGPGKVAAVAWEGEDGGSGPGLEDPDMNSGNLKLVQSVLVAGLYPHVAAFVRPD---RQSKTRQVK------KAHFVTRDDSEPVFMHPSSVNHQ 1364
RE S Q + M+ +R LPA+ +RE I+E ++ +QV+V+SG TGCGKTTQVPQFVLD + CN++CTQPRRISA+ VA RVA ER E++G +VGYQIRL+S +TRL +CTTG+LLRRL D L GV+H++VDEVHER ++DFLL++L+DL+ +R DLRVVLMSATL A+ LF++Y + CP + IPGRTFPV+ +++D+ ++ G +P + P V R GP G+G G GA GGR RG KGG +D ++ P P L + + +++ +K++ D++ +L++ I+ EG D GA+LIF+PGFAEI L + L+ +P RG+R + PLHSSL + +Q+++F+ P GV KI++STNIAETS+TIDD +VID G+++E RYD M L E W+SKA+ QR GRAGRV +G C+ L+ ++ + L E+ R PLE+L L+I +L+L + R +EPP P+ L AA++ L DL A+ +S LTPLGYHLA LPVD +GKL+L AI +CLDPILTIAA+L+ K+PF P+ ++ A+ + FA+ KSDHL +++A+ W R ++G +CRENFLS TL+ + SL+ QF + L+++GF + +R + A G DG + + N+ NLKLV ++L A LYP+V P+ +Q+ T ++ + F+T+ D PV +HPSSVN Q
Sbjct: 643 REKMSNRQYQAMLQERGKLPAWEERELILELLQLHQVLVVSGMTGCGKTTQVPQFVLDASLQGSPANVCNLVCTQPRRISAISVAERVARERAERLGASVGYQIRLESVQSSATRLLYCTTGVLLRRLEGDPMLQGVTHVLVDEVHERTEESDFLLMVLKDLIAQRSDLRVVLMSATLNAQ----LFSEYLYGCPVVHIPGRTFPVDQYFLEDIIDLTGYIIEHG-SPFMRPAV--RGGPDGGKGKGASAIGA----GGR----RG--------KGGGFMEQLEEDLLRSLILSPRNAVPVKEKAPDQTLSIQQLHSRYIECRMTTIKTLAAMDLEKINLDLIEELLEWIL--EGK-------------------------------------------------------------------HDYKAGAVLIFMPGFAEIKTLFEKLQTNPMFNNRRGNRALLLPLHSSLSSEEQQAVFKAAPEGVIKIIISTNIAETSITIDDVVYVIDCGKMKEKRYDAGKGMESLEETWVSKANAVQRRGRAGRVASGACFHLFTSHRFEHLLDEQQLPEIQRVPLEQLCLRIKMLDLFKDRQLDSVFSRLIEPPAPESLTAAIQRLRDLGALTEKES---LTPLGYHLASLPVDVRIGKLVLFGAIFRCLDPILTIAASLAFKSPFVSPWDKRQEANAKKLEFAEAKSDHLTLLKAYKGWLGAMRDRIHEG-HHFCRENFLSWRTLQEISSLKRQFAELLSDIGFVREGLRARD------------------------------------MERAARHGGDGVLETTGSESNSNADNLKLVGAMLCAALYPNVVQVTVPEGKFQQTSTGAMRMPSKSEELRFITKSDG-PVHIHPSSVNFQ 1404
BLAST of mRNA_C-linearis_contig80.15848.1 vs. uniprot
Match: A0A6I9R4I4_ELAGV (RNA helicase n=4 Tax=Arecaceae TaxID=4710 RepID=A0A6I9R4I4_ELAGV) HSP 1 Score: 478 bits (1231), Expect = 3.850e-144 Identity = 299/738 (40.51%), Postives = 413/738 (55.96%), Query Frame = 0
Query: 508 STAQSRQMMTQRQGLPAYLQREDIVETIRDNQVVVLSGETGCGKTTQVPQFVLDDFIDQGDGGKCNIICTQPRRISAVGVAGRVASERCEKVGGTVGYQIRLDSRVGPSTRLTFCTTGILLRRLTSDDTLAGVSHIMVDEVHERDLQTDFLLVILRDLLPKRPDLRVVLMSATLQARIIADLFTKYFHDCPSITIPGRTFPVEITYMDDVNRVLRGGKTPAVMPRVSSRAGPVVGRGNGRRNGGAQASTGGRGPGGRGHPAAAGAAKGGERDDDPTTMAYDPLTVEPLELDRDGXXXXXXXXXXXASVSPKCEDKVDYDIMVDLVDHIMKTEGNGXXXXXXXXXXXXXXXXXXXXXXXRDDRQGQRRXXXXXXXXXXXXXXXWXXXXXXXSRGEAARAGDGSDEPLGAILIFLPGFAEIDQLVKALERHPRIGRGSR--VFPLHSSLPAHQQRSIFQRMPPGVRKIVVSTNIAETSLTIDDCTHVIDAGRVREMRYDPITRMSCLVEVWISKASGSQRAGRAGRVRAGKCWRLYPEAFHQNFMPPHTLAEMLRTPLEELVLQILLLELGSPAEFLDRAVEPPPPKMLRAALRNLYDLQAIIISKSTPILTPLGYHLAHLPVDACVGKLLLIAAILQCLDPILTIAAALSDKAPFQRPFGEQARADKARQGFAQGK-SDHLAIVEAFGAWRNKRRTNSYDGVRRWCRENFLSHPTLERLDSLREQFRQQLAEVGFASSA 1242
+T +R M + R+ LPA+ +++ ++ + DNQV+V+SGETGCGKTTQ+PQF+L++ I++ G KCNIICTQPRRISA+ VA R+ASER E +G TVGYQIRL+++ TRL FCTTG+LLRRL + L GVSH++VDE+HER + DFL++ILRDLLP+RPDLR++LMSAT+ A +LF+ YF + P I IPG T+PV +++DV R R+ S G RR P+T DPLT E E D DI ++ M T + W EA E GAIL+FL G+ EI +L+ ++ + +G SR V PLH S+P QR IF R P VRKIV++TNIAE+S+TIDD +VID G+ +E YD + +++CL+ WISKAS QR GRAGRV+ G C+RLYP+ H + MP + L E+LRTPL+EL L I L+LG+ A FL +A++PP P ++ AL L + A+ + LTPLG HL LP+D +GK+LLI ++ QCLDP LTIAAAL+ + PF P + AD A++ FA SDH+A+++AF AW++ +R+ R +C ENFLS TL+ ++ +R QF L+++GF + A
Sbjct: 241 ATPSARVMQSFREKLPAFKVKDEFLKAVADNQVLVVSGETGCGKTTQLPQFILEEEIERLQGAKCNIICTQPRRISAISVAARIASERGENLGETVGYQIRLEAKRSAQTRLLFCTTGVLLRRLVQEPDLGGVSHLLVDEIHERGMNEDFLIIILRDLLPRRPDLRLILMSATINA----ELFSTYFGNAPIIHIPGLTYPVAEVFLEDVVEKTRY--------RIKSEFDNFQGNSRRRRR-------------------------------QPSTK-NDPLT-EMFE---------------------------DVDIDAQYKNYSMSTRQS---------------------------------------------LEAWDGTQLDLGLVEATIEYICRHEKDGAILVFLTGWDEISKLLDKIKGNNFLGNSSRFLVLPLHGSMPTVNQREIFDRPPSNVRKIVLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQPGVCYRLYPKVIH-DAMPQYQLPEILRTPLQELCLNIKSLQLGAVATFLAKALQPPDPLSVKNALELLKTIGALDEMEE---LTPLGCHLCTLPLDPNIGKMLLIGSVFQCLDPALTIAAALAHRDPFVLPINRKEEADAAKRSFAGDSCSDHIALLKAFEAWKDAKRSGK---ERAFCWENFLSPMTLQMMEDMRNQFLDLLSDIGFVNKA 854 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig80.15848.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig80.15848.1 ID=prot_C-linearis_contig80.15848.1|Name=mRNA_C-linearis_contig80.15848.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1527bpback to top |