prot_C-linearis_contig8.15821.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15821.1
Unique Nameprot_C-linearis_contig8.15821.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length487
Homology
[Close]
BLAST of mRNA_C-linearis_contig8.15821.1 vs. uniprot
Match: A0A6H5JUY3_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUY3_9PHAE)

HSP 1 Score: 426 bits (1094), Expect = 3.340e-141
Identity = 354/554 (63.90%), Postives = 372/554 (67.15%), Query Frame = 0 
Query:    1 MAPPQESNGVSFGQQEIAAGYGTEPKRMRLSGVAHAAAVTAGSSTTT------------RASTGAPTAMTNKGSVYKAQRGRAVTAAAAVKAKAPTTHRRRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFADSAVCNFDSEHEADRQAEIHKQRQLVQQQQLAEDRAHH----------AQLHGGSFSVGREEFDDLEEYHRGMDEAT-CSSEDGE-EGMDGEGEPLHDDE---------------------------QDDGEMSEEGVDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSPRCEVTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIGDMQV-QQRGRCSSGESDCSSDFVPPSLMREVSQSST-QEGMGFPVAEDLLGYEMQSWYRCQDDEDRSPXXXXXXXXXXXXXXXXX---------------SEELWGTAVGANLGWGFGDFAQTYSDGGSRASSGSMTSSNLSCDDEYLPSALPPLMGISAGEA 486
            MAPPQES+  SF Q E+A  Y TEPKRMRLSG A +                       RASTGAPTAMTNKGSVYKAQRGRAV+AAA VKAKAPTTHRRRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFADSAVCNFDSEHEADRQA IHKQRQL+                      AQLHGGSFSVGREEFDDLEEYHRGMDEAT CSSE+ + EG+D E E LH D+                            DD E+     D+                                   XXXXXXXXXXXXXXXXXXX        T       XXXXXXXXXXXXXXXXXXXXXXX +   Q+ QQRGRCSSGESDCSS+FV PSL+RE S SST QEGMGFPVAEDLLGYEMQSWY CQ       XXXXXXXXXXXXXXXXX               SEELWGTAVGANLGWGFGDFAQ YSDGGSRASSGSM+SS LSCDDEY+PSALPPLMG+SA EA
Sbjct:    1 MAPPQESSSGSFRQHEVAE-YATEPKRMRLSGAAKSXXXXXXXXXXXXXXXXXXXXXXXRASTGAPTAMTNKGSVYKAQRGRAVSAAA-VKAKAPTTHRRRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFADSAVCNFDSEHEADRQAVIHKQRQLLXXXXXXXXXXXXXXXXXXXXXXAQLHGGSFSVGREEFDDLEEYHRGMDEATTCSSEEDDGEGLDNE-ESLHGDDIDDDIDDSVHGEEEDHRRGRXXXRLNGDDDDELPAAECDMSDEGGDRYEEDGVIGGGGSSGRSMSCSYSSAMSTGXXXXXXXXXXXXXXXXXXXXXXXXEVATVADGSAFXXXXXXXXXXXXXXXXXXXXXXXDLHTQQLEQQRGRCSSGESDCSSEFVTPSLLREESLSSTTQEGMGFPVAEDLLGYEMQSWYCCQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEELWGTAVGANLGWGFGDFAQMYSDGGSRASSGSMSSS-LSCDDEYVPSALPPLMGMSATEA 550
[Close]
BLAST of mRNA_C-linearis_contig8.15821.1 vs. uniprot
Match: D8LM11_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM11_ECTSI)

HSP 1 Score: 254 bits (648), Expect = 1.770e-76
Identity = 232/422 (54.98%), Postives = 251/422 (59.48%), Query Frame = 0 
Query:  110 AVIYKERKQLYLGVYESEVDAAKAHDRAARFHFADSAVCNFDSEHEADRQAEIHKQRQLVQQQQLAEDRAHH----------AQLHGGSFSVGREEFDDLEEYHRGMDEAT-CSSEDGE-EGMDGEGEPLHDDEQDD--------------------------------GEMSEEGVDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSPRCEVTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIGDMQVQQRGRCSSGESDCSSDFVPPSLMREVSQSST-QEGMGFPVAEDLLGYEMQSWYRCQDDEDRSPXXXXXXXXXXXXXXXXXSEELWGTAVGANLGWGFGDFAQTYSDGGSRASSGSMTSSNLSCDDEYLPSALPPLMGISAGEA 486
            +V++  + +LYLGVYESEVDAAKAHDRAARFHFADSAVCNFDSEHEADRQA IHKQRQL+                      AQLHGGSFSVGREEFDDLEEYHRGMDEAT CSSE+ + EG+D + E LH D+ DD                                G+MS+EG D                                  XXXXXXXXXXXXXXXXXXXXX          XXXXXXXXXXXXXXXXXXXX                QQRGRCSSGESDCSSDFV PSL+RE S SST QEGMGFPVAEDLLGYEMQSWY CQDDE+RSP                       T+ G            TYSDGGSRASSGSM+SS LSCDDEY+ SALPPLMG+SA EA
Sbjct:   10 SVLFSPKYKLYLGVYESEVDAAKAHDRAARFHFADSAVCNFDSEHEADRQAVIHKQRQLLXXXXXXXXXXXXXXXXXXXXXXAQLHGGSFSVGREEFDDLEEYHRGMDEATTCSSEEDDGEGLDND-ESLHGDDIDDDIEDSVHGGEEEDHRRGRLDXXXXXXELPAAEGDMSDEGGDRYEEDGVIGGGGTSGRSMSCSYSSAMSTGSMSDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLHAQ--------QLEQQRGRCSSGESDCSSDFVTPSLLREESMSSTTQEGMGFPVAEDLLGYEMQSWYCCQDDEERSPS----------------------TSGG------------TYSDGGSRASSGSMSSS-LSCDDEYVSSALPPLMGMSATEA 387
[Close]
BLAST of mRNA_C-linearis_contig8.15821.1 vs. uniprot
Match: A0A836CI56_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI56_9STRA)

HSP 1 Score: 117 bits (294), Expect = 4.790e-27
Identity = 55/66 (83.33%), Postives = 61/66 (92.42%), Query Frame = 0 
Query:   85 THRRRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFADSAVCNF 150
            T RRRGR+GKS+YRGVCVTREGKWRAVIYKERKQLYLGV+ESE+DAAKAHDRAAR+HF   A+ NF
Sbjct:   19 TARRRGRKGKSIYRGVCVTREGKWRAVIYKERKQLYLGVFESEIDAAKAHDRAARYHFGAQAMVNF 84
[Close]
BLAST of mRNA_C-linearis_contig8.15821.1 vs. uniprot
Match: D7FZ71_ECTSI (AP2/ERF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ71_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 8.170e-27
Identity = 60/75 (80.00%), Postives = 68/75 (90.67%), Query Frame = 0 
Query:   84 TTHRRRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFADSAVCNFDSEHEADR 158
            T  RRRGR+G+S+YRGVCVTREGKWRAVIYKERKQLYLGVYESE++AAKAHDRAARFHF D ++ NF +E EADR
Sbjct:  130 TPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKSMTNFATEAEADR 204
[Close]
BLAST of mRNA_C-linearis_contig8.15821.1 vs. uniprot
Match: A0A6H5LCQ5_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCQ5_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 1.120e-26
Identity = 60/75 (80.00%), Postives = 68/75 (90.67%), Query Frame = 0 
Query:   84 TTHRRRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFADSAVCNFDSEHEADR 158
            T  RRRGR+G+S+YRGVCVTREGKWRAVIYKERKQLYLGVYESE++AAKAHDRAARFHF D ++ NF +E EADR
Sbjct:  117 TPRRRRGRKGRSIYRGVCVTREGKWRAVIYKERKQLYLGVYESELEAAKAHDRAARFHFPDKSMTNFATEAEADR 191
[Close]
BLAST of mRNA_C-linearis_contig8.15821.1 vs. uniprot
Match: A0A836CH07_9STRA (AP2/ERF domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH07_9STRA)

HSP 1 Score: 102 bits (254), Expect = 2.830e-23
Identity = 48/54 (88.89%), Postives = 50/54 (92.59%), Query Frame = 0 
Query:   97 YRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFADSAVCNF 150
            YRGVCVTREGKWRAVIYKERKQLYLGV+ESEVDAAKAHDRAAR HF D A+ NF
Sbjct:    1 YRGVCVTREGKWRAVIYKERKQLYLGVFESEVDAAKAHDRAARQHFGDQAMVNF 54
[Close]
BLAST of mRNA_C-linearis_contig8.15821.1 vs. uniprot
Match: A0A6V1UZI2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UZI2_HETAK)

HSP 1 Score: 85.1 bits (209), Expect = 7.110e-15
Identity = 41/63 (65.08%), Postives = 51/63 (80.95%), Query Frame = 0 
Query:   88 RRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFADSAVCNF 150
            RRG RG+S ++GVCVTR GKWR+VIY  RKQLYLGV+E+E +AAKA+D +A  +F D AV NF
Sbjct:  143 RRGPRGQSQFKGVCVTRAGKWRSVIYVGRKQLYLGVFETEQEAAKAYDNSAVKYFGDGAVLNF 205
[Close]
BLAST of mRNA_C-linearis_contig8.15821.1 vs. uniprot
Match: A0A7S3Y6J2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6J2_HETAK)

HSP 1 Score: 85.1 bits (209), Expect = 8.750e-15
Identity = 41/63 (65.08%), Postives = 51/63 (80.95%), Query Frame = 0 
Query:   88 RRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFADSAVCNF 150
            RRG RG+S ++GVCVTR GKWR+VIY  RKQLYLGV+E+E +AAKA+D +A  +F D AV NF
Sbjct:  156 RRGPRGQSQFKGVCVTRAGKWRSVIYVGRKQLYLGVFETEQEAAKAYDNSAVKYFGDGAVLNF 218
[Close]
BLAST of mRNA_C-linearis_contig8.15821.1 vs. uniprot
Match: D8LFR4_ECTSI (Pathogenesis-related transcriptional factor and ERF n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFR4_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 5.860e-14
Identity = 41/63 (65.08%), Postives = 50/63 (79.37%), Query Frame = 0 
Query:   88 RRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFADSAVCNF 150
            RRG RG+S ++GVC+TR GKWRAVIY  RKQ YLGV++SE DAA+A+D AA  HFA+ A  NF
Sbjct:  341 RRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNF 403
[Close]
BLAST of mRNA_C-linearis_contig8.15821.1 vs. uniprot
Match: A0A6H5KQM0_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM0_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 8.460e-14
Identity = 41/63 (65.08%), Postives = 50/63 (79.37%), Query Frame = 0 
Query:   88 RRGRRGKSVYRGVCVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFADSAVCNF 150
            RRG RG+S ++GVC+TR GKWRAVIY  RKQ YLGV++SE DAA+A+D AA  HFA+ A  NF
Sbjct:  399 RRGPRGQSRFKGVCITRAGKWRAVIYIGRKQKYLGVFDSEFDAARAYDAAALQHFAEGAKLNF 461
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15821.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A6H5JUY3_9PHAE3.340e-14163.90AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
D8LM11_ECTSI1.770e-7654.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CI56_9STRA4.790e-2783.33AP2/ERF domain-containing protein n=1 Tax=Tribonem... [more]
D7FZ71_ECTSI8.170e-2780.00AP2/ERF domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5LCQ5_9PHAE1.120e-2680.00AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
A0A836CH07_9STRA2.830e-2388.89AP2/ERF domain-containing protein (Fragment) n=1 T... [more]
A0A6V1UZI2_HETAK7.110e-1565.08Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y6J2_HETAK8.750e-1565.08Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D8LFR4_ECTSI5.860e-1465.08Pathogenesis-related transcriptional factor and ER... [more]
A0A6H5KQM0_9PHAE8.460e-1465.08AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 96..157
e-value: 1.7E-8
score: 44.2
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 96..151
score: 12.418
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10coord: 96..153
e-value: 3.5E-11
score: 44.8
NoneNo IPR availablePANTHERPTHR32467:SF94FLORAL HOMEOTIC PROTEIN APETALA 2coord: 71..152
coord: 92..165
NoneNo IPR availablePANTHERPTHR32467FAMILY NOT NAMEDcoord: 71..152
coord: 92..165
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 95..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:3702493..3705687 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15821.1mRNA_C-linearis_contig8.15821.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 3702425..3705931 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15821.1 ID=prot_C-linearis_contig8.15821.1|Name=mRNA_C-linearis_contig8.15821.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=487bp
MAPPQESNGVSFGQQEIAAGYGTEPKRMRLSGVAHAAAVTAGSSTTTRAS
TGAPTAMTNKGSVYKAQRGRAVTAAAAVKAKAPTTHRRRGRRGKSVYRGV
CVTREGKWRAVIYKERKQLYLGVYESEVDAAKAHDRAARFHFADSAVCNF
DSEHEADRQAEIHKQRQLVQQQQLAEDRAHHAQLHGGSFSVGREEFDDLE
EYHRGMDEATCSSEDGEEGMDGEGEPLHDDEQDDGEMSEEGVDVDGDGDG
GYDEDDGLGRTSRSVSSSYSSAMSTGSMSDGDSGSGHRGGGHNRSRSAGS
SPRCEVTKAAAAAAAAAFATVVAPPSAAAAGAAGAGNGIGDMQVQQRGRC
SSGESDCSSDFVPPSLMREVSQSSTQEGMGFPVAEDLLGYEMQSWYRCQD
DEDRSPSTSAEFQFESQQQQQQQSEELWGTAVGANLGWGFGDFAQTYSDG
GSRASSGSMTSSNLSCDDEYLPSALPPLMGISAGEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR036955AP2/ERF_dom_sf
IPR016177DNA-bd_dom_sf