prot_C-linearis_contig8.15818.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15818.1
Unique Nameprot_C-linearis_contig8.15818.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length337
Homology
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BLAST of mRNA_C-linearis_contig8.15818.1 vs. uniprot
Match: A0A6H5JD62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD62_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 1.220e-35
Identity = 224/287 (78.05%), Postives = 236/287 (82.23%), Query Frame = 0 
Query:    5 SGLEVKSEESEIHHYAQAGDVEEVRRCLLAGFNKVDEVDELGCTPVHLAGAMGHTSVVRLLVE-HGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVGAGAGAGRRIPQGLKLDLVNMLERYQLGEYAMARAPMSSTKSLHQMWRDRDTYSNISFSSTPRMAGLGLPAG 290
            S LEVK EESEIHHYAQAGDVEEVRRCLLAGFNKVDEVDELGCTPVHLAGAMGHT+VV+LLVE H AA     XXXXXXXXXXXXXXXXXXXXX       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               MVGA    GRRIPQGLK D++N LERYQ+GEY +ARAP+SST+SL Q+WRDRD+  +   +ST R   L   AG
Sbjct:   72 SSLEVKVEESEIHHYAQAGDVEEVRRCLLAGFNKVDEVDELGCTPVHLAGAMGHTNVVKLLVEEHRAAVDARDXXXXXXXXXXXXXXXXXXXXXLLRLGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPSAKDAHGKQAVDMVGA----GRRIPQGLKFDIINTLERYQMGEYGIARAPLSSTRSLRQIWRDRDSGESTPRASTARAGSLPSGAG 354
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BLAST of mRNA_C-linearis_contig8.15818.1 vs. uniprot
Match: D8LLZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLZ4_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 6.390e-16
Identity = 41/63 (65.08%), Postives = 51/63 (80.95%), Query Frame = 0 
Query:  223 GAGRRIPQGLKLDLVNMLERYQLGEYAMARAPMSSTKSLHQMWRDRDTYSNISFSSTPRMAGL 285
            GAGRRIPQGL+ D++N LERYQ+GEYA+ARAP+SST+SL QMWRDRD+  +   +ST R   L
Sbjct:  165 GAGRRIPQGLRFDIINTLERYQMGEYAIARAPLSSTRSLRQMWRDRDSGESTPRASTARAGSL 227
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15818.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JD62_9PHAE1.220e-3578.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLZ4_ECTSI6.390e-1665.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 94..108
score: 43.64
coord: 46..61
score: 35.04
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 177..206
e-value: 3.2E-6
score: 36.7
coord: 78..107
e-value: 0.001
score: 28.3
coord: 45..74
e-value: 0.0021
score: 27.3
coord: 11..41
e-value: 2600.0
score: 1.9
coord: 144..173
e-value: 1.4E-4
score: 31.2
coord: 111..140
e-value: 1.9
score: 17.5
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 78..110
score: 11.648
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 111..143
score: 9.217
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 177..209
score: 13.891
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 144..176
score: 13.731
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 45..77
score: 13.651
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 119..224
e-value: 5.5E-33
score: 116.0
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 8..118
e-value: 2.3E-32
score: 113.4
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 13..217
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 116..208
e-value: 2.6E-18
score: 66.4
coord: 17..109
e-value: 8.0E-12
score: 45.6
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 11..217
score: 62.473
NoneNo IPR availablePANTHERPTHR24134:SF3ANKYRIN REPEAT FAMILY PROTEINcoord: 32..123
NoneNo IPR availablePANTHERPTHR24134:SF3ANKYRIN REPEAT FAMILY PROTEINcoord: 71..148
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 13..76
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 104..185
coord: 131..219
NoneNo IPR availablePANTHERPTHR24134:SF3ANKYRIN REPEAT FAMILY PROTEINcoord: 13..76
coord: 104..185
NoneNo IPR availablePANTHERPTHR24134:SF3ANKYRIN REPEAT FAMILY PROTEINcoord: 131..219
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 71..148
coord: 32..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:3675357..3678971 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15818.1mRNA_C-linearis_contig8.15818.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 3675357..3678971 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15818.1 ID=prot_C-linearis_contig8.15818.1|Name=mRNA_C-linearis_contig8.15818.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=337bp
PVFSSGLEVKSEESEIHHYAQAGDVEEVRRCLLAGFNKVDEVDELGCTPV
HLAGAMGHTSVVRLLVEHGAAVDARDGAQCTALHAASEGGHPVVVELLLH
LGADIDARNLKQQTPLHYACGYGQVGAVHQLVVRRASVGARDVKGNTPLH
LACGEGGADVVRLLLAHGSPLDALNHRGRQPLHLACRNGHREVAIELLEH
GADPSARDVDGLQALHMVGAGAGAGRRIPQGLKLDLVNMLERYQLGEYAM
ARAPMSSTKSLHQMWRDRDTYSNISFSSTPRMAGLGLPAGPSSAAAAAAA
AGAAAAAVSASGKVGGRFFGSGGGASTTSFSRKGSSF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom