prot_C-linearis_contig8.15817.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15817.1
Unique Nameprot_C-linearis_contig8.15817.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length194
Homology
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BLAST of mRNA_C-linearis_contig8.15817.1 vs. uniprot
Match: D8LLZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLZ4_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 5.040e-15
Identity = 45/55 (81.82%), Postives = 49/55 (89.09%), Query Frame = 0 
Query:   13 SPRWMVGAQVAGRLEEMRARELAASLRSKVQENEAMKRYLESVKEEMRMLQRKVS 67
            SPRW VGA VAGRLE MRAREL ASLR+KVQENEAMKRY+ESV EEMR LQ+K+S
Sbjct:  338 SPRWTVGAAVAGRLEGMRARELGASLRAKVQENEAMKRYVESVTEEMRALQQKIS 392
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BLAST of mRNA_C-linearis_contig8.15817.1 vs. uniprot
Match: A0A6H5JD62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD62_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 2.290e-12
Identity = 40/47 (85.11%), Postives = 42/47 (89.36%), Query Frame = 0 
Query:    9 GGGHSPRWMVGAQVAGRLEEMRARELAASLRSKVQENEAMKRYLESV 55
            GGG SPRW VGA VAGRLE MRAREL ASLR+KVQENEAMKRY+ESV
Sbjct:  449 GGGRSPRWTVGAAVAGRLEGMRARELGASLRAKVQENEAMKRYVESV 495
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15817.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLZ4_ECTSI5.040e-1581.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JD62_9PHAE2.290e-1285.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 45..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:3672126..3675236 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15817.1mRNA_C-linearis_contig8.15817.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 3672126..3675236 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15817.1 ID=prot_C-linearis_contig8.15817.1|Name=mRNA_C-linearis_contig8.15817.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=194bp
MGGMHGVGGGGHSPRWMVGAQVAGRLEEMRARELAASLRSKVQENEAMKR
YLESVKEEMRMLQRKVSGNSSPSSSSPPPSIPSSGAGGHRDARSTAGAGA
ESPSAATAAASTSMAEQFSIAEMLARGMYGSDGIGGGGGGGSDVLDGSAS
YLQTATPSTGVKAGESAGTAGAEPQGGDVLLEEGAAAEGAADAT
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