prot_C-linearis_contig8.15808.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15808.1
Unique Nameprot_C-linearis_contig8.15808.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1771
Homology
BLAST of mRNA_C-linearis_contig8.15808.1 vs. uniprot
Match: A0A6H5KK87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK87_9PHAE)

HSP 1 Score: 952 bits (2462), Expect = 0.000e+0
Identity = 618/1214 (50.91%), Postives = 718/1214 (59.14%), Query Frame = 0
Query:  625 QQEGRDDDDGLILQCTRVYESLLHTAEDWVSSQRGAALGIGPPLQAVGRRF----RRGEEEEKEGDFLADLVFAAYACTLRYQCILVARSQHLAHEVAFLSCLGAAVDAASSVLLLHKRRRGEESTGAGSNSGRVESSSQLLRVRPSSVGVQEVVDRTSAD-----------------------TPAETSTAALCLQTVLSVAVEADVVSWVLDLYARCGTEGSS-------------SRDGGDACGATTRELLAEVLQSFLFAQGWVNGLCAHGDPDSPSYRGDCSDGDGGVMTDGFSTFGDTVRLVLKSWS----ASGEGVQSPLDQYALSLLGTNADNGDLCKLAAILVSLSPSFLGMLHPHVGCRLDAAVTLLRHVKTIPEAVFCLNLLSHIVL-SGDRQTWGGGG---GRHLSGLSDAVKDLLARFPVGDVALSPIPLSAAALLFSLLAGCDAFYADWLVAAPLVRIERALGEFGASRGGEKQAPDDAMDVAADCSEQQSVVAVWAQEFGREALTGVLEAALSRWGAEIEDSLQHHSQSDAVILRLASVLSMFPDVFFSLAFEMDSQSDDGEQRSRPELAGALGTVIPETLEILSAALSPVVSRRGDRSNENYRASKLACVSQVSQLASAFLRVRCEHGCYAPAGSGMHGSTTPSSRPGPPDFSLARACGALLQGVLDRRRGQGSSG-GGDSTHRALLSVLNLLNALLALAGGDSDLLRPDTQGLALALQESHAALSEVLAPTAMVIERLTGWLDLAPDTLAAFLQACVLWNAIESKHDVLGDDPNRSRLNPPFQVLREVLSLGGSGPCAIVGSGGGISSSSNNKGLSKPQASSPAPRRGVRRSLLQVLAMRCVESAAQTRFFSHQEVLALQLALQAMACDSSATVASAAHGALQALWEAYAGFIQPADLVGQSWNPFVVECSLENALRSLFGDPGESGVADLLRVVNDPGELRVDPPVVVSTIGRLLRWCEGKACPRLSHSKA---SGLEVLSETAAVSIHQCAIVLATNLRLTLGDGIDLRDDP---------QQRDRSRGGGGSREGREEGMRSDVA--FHLSDALAQMVHVLLCIHP-LPQEGLAVEERVRQDLVDALLALHPALLRFREV--------WPWLEQVSMPLSSGAYHDCALNCSAFNGYGGVFFVRYDNWRALSLALEPVSLAVLAGEIGTLVERLSGRPGVAARTEVGEGQDVHD 1766
            QQEG DD  GL+LQC RVYESLLHTAE+WVSSQ G+ +G G   QA   RF    RRG   E E   LADLVF +Y  TL YQC L+ARS++LAH+VA+LSCLGAAVDA S+VL   +       +G  ++      S QL  VRPS V  QE+ DR                            P E S  A CL T+L + VEADVVSW+L+LYARCG + SS             S D  DA GATT  LL EVLQS L AQGWVNG+CAHG    PS+  +C  GD G      STFG+TVRL+L+SW+    +SGE V  PLD + +S LG  ADNGDLCKL  +LVS+SPSFLG+LHPHVGCR+D+AVTLLR++KT+PEAVFCLNL SHI+L  GD+   G GG    R    LS AVKDLLARF V +VALS IPLSA+A+ F+LLAGC+AF +DWLVAAPL R++RAL EFGA    +    DD  D+ A CSE             R AL G+L A L RW  E      HHSQSDAVI RLA VL M PD   SLAF+ DS  + G      ELA AL T+IPETLE LSAALSPVVSR  DR N NY ASKL C S VSQ+ASAFL  RC +G Y      +   T  +S   PP+  LARACG LLQG+L +RRGQGS G GGDST +ALLSVLNLL ALL L G DS LLR   QGL LALQES AALSE+LA TA+  ERLTGWLD APD LAAFLQ                                                                                 VLA+RCVE AAQT FF+ QEVLALQLALQ +AC    T+A+AAHGA+QALWE+Y+G +Q ADLVGQSWNPF+VECSLENALRSL  D        LL    DP E +V  PV+VS IGRLLRW  GK C RL  S A     +E+LS TA  ++ +C  +LATNLR+ LGDG   RDD          Q    S  G   +E  E G +       HL DAL ++V VL CI P L Q GL +  + R++L+DAL+ LH AL+  RE         W  LEQVSMPLS GAYHD        N Y GVFFV+YDNW ++S    P+ LA LA E+   VE LS  PG   R E GE   V D
Sbjct:   14 QQEGHDDG-GLVLQCARVYESLLHTAEEWVSSQ-GSTVG-GMSCQASANRFGGGGRRGTRGE-ESVSLADLVFGSYERTLSYQCNLIARSENLAHDVAWLSCLGAAVDATSAVLFHKRXXXXXXXSGGRTSKNGTMGSWQLFNVRPSFVNTQEL-DRDCVGFPGSGGSRASGGAVGGGEQEYSIAPGEVSIPASCLGTILKMVVEADVVSWMLNLYARCGGDRSSGGTTTHPSRSSEGSSDVVDAHGATTCALLMEVLQSLLHAQGWVNGVCAHG-AGRPSHEMEC--GDRG------STFGETVRLMLQSWTTRGVSSGEEVHMPLDHFVMSQLGKRADNGDLCKLVVLLVSVSPSFLGVLHPHVGCRIDSAVTLLRYIKTVPEAVFCLNLFSHIILVEGDKIDGGRGGELSSRLGEDLSAAVKDLLARFSVEEVALSLIPLSASAISFALLAGCEAFVSDWLVAAPLARVKRALTEFGAFCERQGATDDDIADLVAGCSE-------------RVALKGILGATLRRWRVEAGKDSPHHSQSDAVIYRLACVLLMSPDTLLSLAFDSDSHPN-GPMDLEQELASALATIIPETLEGLSAALSPVVSRHSDRGNTNYLASKLECASCVSQIASAFLHARCTYGYYTTIDRDVRARTGFASCQEPPEIPLARACGGLLQGLLRQRRGQGSFGDGGDSTFKALLSVLNLLGALLVLVGRDSFLLRKTNQGLVLALQESCAALSEMLASTAVATERLTGWLDHAPDVLAAFLQ---------------------------------------------------------------------------------VLAVRCVEGAAQTGFFNGQEVLALQLALQGIACHGGPTLAAAAHGAIQALWESYSGVLQSADLVGQSWNPFMVECSLENALRSLSRDQESGAGLGLLPSEKDPDEFQVGAPVLVSAIGRLLRWSAGKTCLRLRTSGALAGCNIELLSATAVAAVCRCTALLATNLRIALGDGTVQRDDRLGKRPRLGYQSSSNSSSGRSLKEMAENGEKGGDGERLHLFDALTRLVDVLTCIEPILSQAGLDLRSQARKELLDALVPLHSALVYSREGGSIRHETNWEQLEQVSMPLSRGAYHDGGRGHGESNSYEGVFFVKYDNWWSISGVSGPLQLAELAREVEKFVELLSRTPGAGLRMEGGESHAVQD 1118          
BLAST of mRNA_C-linearis_contig8.15808.1 vs. uniprot
Match: D8LNY6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNY6_ECTSI)

HSP 1 Score: 431 bits (1108), Expect = 5.500e-133
Identity = 248/414 (59.90%), Postives = 287/414 (69.32%), Query Frame = 0
Query:   83 MFLHGVDSTDTGVVQAATDIMLALKDEIDDPVGVLTSLVSSTVSLGLPRASGHLYLIGQLLTNASQDLALVTTLGNACFGRYCCDNHHPAHPQAAARGVVDGSXXXXXXXXXXXXXXXTERRSAEQEQFQERLQGFGSFLASHALSASCQDHVKSDVLYVALELVECCTTA--GATIAPQDPSLSPP-GSDPFVSIMLGVPRLLAGRPSCDEPLQLHSIAYLATATAYCRLRTEMGVPGWACNACGVPEVLVALVDGAREFSPREMVAGXXXXXXXXXXXSLPTSSGG-LCNTLKTLLMASSYRVRSATARLVTLLCSDSRFSEEPAEADENSAVCFASGGRKTGG-LFFREVLIAAGATDFLLEAIKSERIGTPRVYLEAAEAFALSPVEFFHADNFSMKFAAPVLLRAFRDG 491
            M L+G+ S D  VVQAATDIML+LKDE+ DPV VLTSL+SSTVSLGLPRASGHLYL+G+LL NAS D AL  TLGN+CFGR         H Q   + +V G                  R   E+      L+GFG+FLA+ ALS SC DH KSDVL+VALEL++CCT    GA IAPQ P + PP G DPFVSIML +PRLLA R S DE LQLH IAYLAT   YCR RTEMGVPGW+ N  GVP+VL  L +GARE +PRE++             S  + SGG LC+TLKTLLM+SSYRVRSATARL+T LC D  F E+   A EN+A+    G R+ G  LFFRE+L+AAG+TDFL EAIKSER G+ R YLEAA+AFA SPVEFFHADNF MKFAAP+LL AFR G
Sbjct:    1 MLLNGIGSEDAEVVQAATDIMLSLKDELPDPVAVLTSLISSTVSLGLPRASGHLYLVGKLLANASYDRALAATLGNSCFGR------RDGHGQRQQQTLVIGDRSGQGIVPSHGGSGVETRDEGEE------LRGFGAFLAAQALSTSCSDHTKSDVLFVALELLDCCTAVCMGAGIAPQGPLMPPPPGGDPFVSIMLALPRLLARRSSSDELLQLHGIAYLATVARYCRQRTEMGVPGWSSNRDGVPDVLAELFEGAREATPREVLP-----TGGGGEGSKQSFSGGMLCSTLKTLLMSSSYRVRSATARLITSLCRDVPFGEDSELAHENAAM----GSRRNGSSLFFREILLAAGSTDFLFEAIKSEREGSTRYYLEAADAFASSPVEFFHADNFCMKFAAPILLDAFRGG 393          
BLAST of mRNA_C-linearis_contig8.15808.1 vs. uniprot
Match: D8LNY5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNY5_ECTSI)

HSP 1 Score: 412 bits (1058), Expect = 8.670e-125
Identity = 268/501 (53.49%), Postives = 316/501 (63.07%), Query Frame = 0
Query:  625 QQEGRDDDDGLILQCTRVYESLLHTAEDWVSSQRGAALGIGPPLQAVG--------------RRFRRGEEEEKEGDFLADLVFAAYACTLRYQCILVARSQHLAHEVAFLSCLGAAVDAASSVLLLHKRRRGEESTGAGSNSGRVESSS-QLLRVRPSSVGVQEVVDRTSADT-----------------PAETSTAALCLQTVLSVAVEADVVSWVLDLYARCGTEGSS-------------SRDGGDACGATTRELLAEVLQSFLFAQGWVNGLCAHGDPDSPSYRGDCSDGDGGVMTDGFSTFGDTVRLVLKSWSASG----EGVQSPLDQYALSLLGTNADNGDLCKLA---------------AILVSLSPSFLGMLHPHVGCRLDAAVTLLRHVKTIPEAVFCLNLLSHIVLSGDRQTWGGGGGRHLSGLSD----AVKDLLARFPVGDVALSPIPLSAAALLFSLLAGCDAFYADWLVAAPLVRIERALGEFGA 1057
            QQEG DD  GL+LQC RVYESLLHTAE+WVSSQ G+ +G G   QA                RR  RGEE       LADLVF++Y  TL YQC L+A+S++L H+VA+LSCLGAAVDA S+VL  HKRRR E +   G  S      S QLL VRPS V  QE+    S  +                 P E S  A CL+T+L V VEADVVSW+LDLYA+CG + SS             S D  DA GATT  LL EVLQS L AQGWVNG+CAHG  D PSY  +C  G G        T G+TVRL+L+SW+  G    E V  PLDQ+ +S LG  ADNGDLCKL                 +LVS+SPSFLG+LHPHVGCR+D+AVTLLR++KT+PEAVFCLNL SHIVL    +  GG GG   S LS+    AVKDLLARF V +VALS IPLSA+A+ F+LLAGC+AF ++WLVAAPL R++RAL EFGA
Sbjct:   14 QQEGHDDG-GLVLQCARVYESLLHTAEEWVSSQ-GSTVG-GTSCQASAXXXXXXXXXXXXXXRRGFRGEESVG----LADLVFSSYERTLSYQCNLIAQSENLTHDVAWLSCLGAAVDATSAVLF-HKRRREEAAARGGRTSKNGTMGSWQLLNVRPSFVNTQELDRDCSGGSGASGGAVGGGEQEYSIAPGEVSIPASCLETILKVVVEADVVSWMLDLYAQCGGDTSSGGTTTHSSQSSERSSDVVDAHGATTCALLMEVLQSLLDAQGWVNGVCAHG-ADRPSYEMECG-GRG-------PTIGETVRLMLQSWTTRGVSGAEEVHMPLDQHVMSQLGKRADNGDLCKLVWWYRGRYNRVEAKQKVLLVSVSPSFLGVLHPHVGCRIDSAVTLLRYIKTLPEAVFCLNLFSHIVLVEGDKIDGGRGGELSSRLSEDLSAAVKDLLARFSVEEVALSLIPLSASAISFALLAGCEAFVSNWLVAAPLARVKRALTEFGA 497          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15808.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KK87_9PHAE0.000e+050.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNY6_ECTSI5.500e-13359.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNY5_ECTSI8.670e-12553.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 737..1122
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1123..1143
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 717..736
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..716
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1144..1770

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:3605025..3612915 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15808.1mRNA_C-linearis_contig8.15808.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 3604881..3612929 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15808.1 ID=prot_C-linearis_contig8.15808.1|Name=mRNA_C-linearis_contig8.15808.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1771bp
MADSTSLVVDHVLNPDHDALKHSAVFKGADGSFFCVHCAAERYNGAPAFR
RLALLDGIRSILAAHGGVPSSLRMGGIDACLPMFLHGVDSTDTGVVQAAT
DIMLALKDEIDDPVGVLTSLVSSTVSLGLPRASGHLYLIGQLLTNASQDL
ALVTTLGNACFGRYCCDNHHPAHPQAAARGVVDGSGGGGGVSGGGCGGGV
TERRSAEQEQFQERLQGFGSFLASHALSASCQDHVKSDVLYVALELVECC
TTAGATIAPQDPSLSPPGSDPFVSIMLGVPRLLAGRPSCDEPLQLHSIAY
LATATAYCRLRTEMGVPGWACNACGVPEVLVALVDGAREFSPREMVAGGG
GGGGGGSGSSLPTSSGGLCNTLKTLLMASSYRVRSATARLVTLLCSDSRF
SEEPAEADENSAVCFASGGRKTGGLFFREVLIAAGATDFLLEAIKSERIG
TPRVYLEAAEAFALSPVEFFHADNFSMKFAAPVLLRAFRDGGGGGGGDGG
TRIDSENKAVVSSLSSQLLLQALVMLPSSGVVEELLATTAVSTQLDTPDK
TRALGLAAEVLSLIASGDISLSKDRGKFLDAVAVLLDQLEEDLARAAHPD
SLQAPAEAAAPSPLGPADLPATCRQQEGRDDDDGLILQCTRVYESLLHTA
EDWVSSQRGAALGIGPPLQAVGRRFRRGEEEEKEGDFLADLVFAAYACTL
RYQCILVARSQHLAHEVAFLSCLGAAVDAASSVLLLHKRRRGEESTGAGS
NSGRVESSSQLLRVRPSSVGVQEVVDRTSADTPAETSTAALCLQTVLSVA
VEADVVSWVLDLYARCGTEGSSSRDGGDACGATTRELLAEVLQSFLFAQG
WVNGLCAHGDPDSPSYRGDCSDGDGGVMTDGFSTFGDTVRLVLKSWSASG
EGVQSPLDQYALSLLGTNADNGDLCKLAAILVSLSPSFLGMLHPHVGCRL
DAAVTLLRHVKTIPEAVFCLNLLSHIVLSGDRQTWGGGGGRHLSGLSDAV
KDLLARFPVGDVALSPIPLSAAALLFSLLAGCDAFYADWLVAAPLVRIER
ALGEFGASRGGEKQAPDDAMDVAADCSEQQSVVAVWAQEFGREALTGVLE
AALSRWGAEIEDSLQHHSQSDAVILRLASVLSMFPDVFFSLAFEMDSQSD
DGEQRSRPELAGALGTVIPETLEILSAALSPVVSRRGDRSNENYRASKLA
CVSQVSQLASAFLRVRCEHGCYAPAGSGMHGSTTPSSRPGPPDFSLARAC
GALLQGVLDRRRGQGSSGGGDSTHRALLSVLNLLNALLALAGGDSDLLRP
DTQGLALALQESHAALSEVLAPTAMVIERLTGWLDLAPDTLAAFLQACVL
WNAIESKHDVLGDDPNRSRLNPPFQVLREVLSLGGSGPCAIVGSGGGISS
SSNNKGLSKPQASSPAPRRGVRRSLLQVLAMRCVESAAQTRFFSHQEVLA
LQLALQAMACDSSATVASAAHGALQALWEAYAGFIQPADLVGQSWNPFVV
ECSLENALRSLFGDPGESGVADLLRVVNDPGELRVDPPVVVSTIGRLLRW
CEGKACPRLSHSKASGLEVLSETAAVSIHQCAIVLATNLRLTLGDGIDLR
DDPQQRDRSRGGGGSREGREEGMRSDVAFHLSDALAQMVHVLLCIHPLPQ
EGLAVEERVRQDLVDALLALHPALLRFREVWPWLEQVSMPLSSGAYHDCA
LNCSAFNGYGGVFFVRYDNWRALSLALEPVSLAVLAGEIGTLVERLSGRP
GVAARTEVGEGQDVHDGASM*
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