prot_C-linearis_contig8.15800.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15800.1
Unique Nameprot_C-linearis_contig8.15800.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length163
Homology
BLAST of mRNA_C-linearis_contig8.15800.1 vs. uniprot
Match: A0A6H5JI64_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI64_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 1.600e-43
Identity = 98/166 (59.04%), Postives = 108/166 (65.06%), Query Frame = 0
Query:    1 MRHAQCSAFAMQGMSTEALAATAYQGR--HSGEGYVTTMCKASLPGWWSNPASARLCYDPTSGGDDGTWTTRTSVKFFADLLEGGQVVGL--QYSCASPGPSRTRVGDPSTVTSSPLDPMASSSARALRLLVDGLGCRHALRVMRESNFGLNGGCIAPRWRDGTMP 162
            MRHAQCSA AM+ MSTEAL A  Y+      G+G V    +  L    SNPASA LCYDP SGG DGTWTTRTSVKFFADLLEG QVV L  + + + P P     G P       L P        LRLLVDGLGCRH LR MRE++FGLNGGC+APRWRDGT P
Sbjct:  325 MRHAQCSAVAMKDMSTEALGAMGYKVHILARGDGNV----RRELANMVSNPASAGLCYDPASGGGDGTWTTRTSVKFFADLLEG-QVVDLLVRITRSYPDPD----GGPDYCHLVALGPDGFVLCTCLRLLVDGLGCRHDLRAMRETDFGLNGGCLAPRWRDGTKP 481          
BLAST of mRNA_C-linearis_contig8.15800.1 vs. uniprot
Match: A0A6H5JYV9_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYV9_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 1.460e-35
Identity = 84/165 (50.91%), Postives = 100/165 (60.61%), Query Frame = 0
Query:    1 MRHAQCSAFAMQGMSTEALAATAYQGRHSGEGYVTTMCKASLPGWWSNPASARLCYDPTSGGDDGTWTTRTSVKFFADLLEG---GQVVGLQYSCASPGPSRTRVGDPSTVTSSPLDPMASSSARALRLLVDGLGCRHALRVMRESNFGLNGGCIAPRWRDGTMP 162
            MRH +CSA+AM+ MSTEALAA AY     G G         +    S+PA A L YDPTSGG DGTWTTRTSVKFFA+LLE     ++V +  S +  GP+   +          L P        LRLLV GLGCRH LR +R+++FGLNGGCIA RWRD T P
Sbjct:  345 MRHVECSAYAMKDMSTEALAAMAYDVEILGTG--NDDVHREIARMVSDPAIAGLSYDPTSGGGDGTWTTRTSVKFFAELLEDQVLDKLVRITRSFSDGGPNYGHL--------VALGPDGFVLCTCLRLLVYGLGCRHGLRAVRDTDFGLNGGCIASRWRDSTQP 499          
BLAST of mRNA_C-linearis_contig8.15800.1 vs. uniprot
Match: A0A6H5KFX3_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFX3_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 9.990e-34
Identity = 82/165 (49.70%), Postives = 98/165 (59.39%), Query Frame = 0
Query:    1 MRHAQCSAFAMQGMSTEALAATAYQGRHSGEGYVTTMCKASLPGWWSNPASARLCYDPTSGGDDGTWTTRTSVKFFADLLEG---GQVVGLQYSCASPGPSRTRVGDPSTVTSSPLDPMASSSARALRLLVDGLGCRHALRVMRESNFGLNGGCIAPRWRDGTMP 162
            MRH +CSA+AM+ MSTEALAA AY       G         +    S+PA A L YDPTSGG DGTWTTRTSVKFFA+LLE     ++V +  S +  GP+   +          L P        LRLLV GLGCRH LR +R+++FG NGGCIA RWRD T P
Sbjct:  294 MRHVECSAYAMKDMSTEALAAMAYDVEILTTGNEDV--HREIARIVSDPAIAGLSYDPTSGGGDGTWTTRTSVKFFAELLEDQVLDKLVRITRSFSDGGPNYGHL--------VALGPDGFVLCTCLRLLVYGLGCRHGLRAVRDTDFGFNGGCIASRWRDSTQP 448          
BLAST of mRNA_C-linearis_contig8.15800.1 vs. uniprot
Match: A0A6H5KQR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQR1_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 2.900e-31
Identity = 78/161 (48.45%), Postives = 85/161 (52.80%), Query Frame = 0
Query:    2 RHAQCSAFAMQGMSTEALAATAYQGRHSGEGYVTTMCKASLPGWWSNPASARLCYDPTSGGDDGTWTTRTSVKFFADLLEGGQVVGLQYSCASPGPSRTRVGDPSTVTSSPLDPMASSSARALRLLVDGLGCRHALRVMRESNFGLNGGCIAPRWRDGTMP 162
            RH +CSAFAM  M  EALAA  Y+      G      +  L    S PASA LCY PTSGG DGTWTTRTS   F+D   GG   G   +                     L P        LRLLVDG GCRHALR MRE +FG NGGCIAPRWRD T+P
Sbjct:   58 RHPKCSAFAMNDMPAEALAAMGYKAEILATG--NDNVQRELAKMVSEPASAGLCYYPTSGGGDGTWTTRTS---FSD---GGPNCGHLVA---------------------LGPDGFILCTRLRLLVDGPGCRHALRAMREMDFGFNGGCIAPRWRDSTLP 189          
BLAST of mRNA_C-linearis_contig8.15800.1 vs. uniprot
Match: A0A6H5KN91_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN91_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 3.000e-27
Identity = 63/116 (54.31%), Postives = 73/116 (62.93%), Query Frame = 0
Query:   47 SNPASARLCYDPTSGGDDGTWTTRTSVKFFADLLEGGQV-VGLQYSCASPGPSRTRVGDPSTVTSSPLDPMASSSARALRLLVDGLGCRHALRVMRESNFGLNGGCIAPRWRDGTM 161
            SNPASA  CYDPT GG DGTWTTRTSVKFF D++EG  V + ++ + + P P+    G P+      L P        LR LVDGL CRHA   MRE +FG N GCIAPRWRD  M
Sbjct:   24 SNPASAGWCYDPTYGGGDGTWTTRTSVKFFVDMVEGHDVDLLVRITTSFPNPA----GGPAYGHLVALGPDGFVLCTCLRFLVDGLCCRHAFLAMREMDFGFNPGCIAPRWRDEEM 135          
BLAST of mRNA_C-linearis_contig8.15800.1 vs. uniprot
Match: A0A6H5KKK0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK0_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 1.310e-26
Identity = 62/119 (52.10%), Postives = 74/119 (62.18%), Query Frame = 0
Query:   47 SNPASARLCYDPTSGGDDGTWTTRTSVKFFADLLEG---GQVVGLQYSCASPGPSRTRVGDPSTVTSSPLDPMASSSARALRLLVDGLGCRHALRVMRESNFGLNGGCIAPRWRDGTMP 162
            S+PA A L YDPTSGG DGTWTTRTSVKFFA+LLE     ++V +  S +  GP+   +          L P        LRL V GLGCRH LR +R+++FG NGGCIA RWRD T P
Sbjct:  132 SDPAIAGLSYDPTSGGGDGTWTTRTSVKFFAELLEDQVLDKLVRITRSFSDGGPNYGHL--------VALGPDGFVLCTCLRLRVYGLGCRHGLRAVRDTDFGFNGGCIASRWRDSTQP 242          
BLAST of mRNA_C-linearis_contig8.15800.1 vs. uniprot
Match: A0A6H5K1S8_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1S8_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 2.170e-22
Identity = 70/162 (43.21%), Postives = 85/162 (52.47%), Query Frame = 0
Query:    1 MRHAQCSAFAMQGMSTEALAATAYQGRHSGEGYVTTMCKASLPGWWSNPASARLCYDPTSGGDDGTWTTRTSVKFFADLLEGGQVVGLQYSCASPGPSRTRVGDPSTVTSSPLDPMASSSARALRLLVDGLGCRHALRVMRESNFGLNGGCIAPRWRDGTMP 162
            M HA CSAFAM+ MS EALAA  Y       G         L  + +NP  A L Y+   G  D T  TRTS++FFA+LL+  QV+      +     +T+           L P        LR+LVDGLGCRHALR MR ++ G  G CIAPRWRDG MP
Sbjct:  221 MLHAGCSAFAMKDMSDEALAAVGYSAETLATG--NDDVHRLLTDFVANPPQAGLLYETDVG--DVTLATRTSIEFFAELLKD-QVLDRLVRVSRSFGDQTKY-----CQLVALGPDGFFLCTCLRILVDGLGCRHALRAMRGTDLGFTGACIAPRWRDGIMP 372          
BLAST of mRNA_C-linearis_contig8.15800.1 vs. uniprot
Match: A0A6H5JPJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ2_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 3.700e-18
Identity = 68/160 (42.50%), Postives = 82/160 (51.25%), Query Frame = 0
Query:    6 CSAFAMQG-MSTEALAATAYQGRHSGEGYVTTMCKAS--LPGWWSNPASARLCYDPTSGGDDGTWTTRTSVKFFADLLEGGQVVGLQYSCASPGPSRTRVGDPSTVTSSPLDPMASSSARALRLLVDGLGCRHALRVMRESNFGLNGGCIAPRWRDGTMP 162
            C +F   G MS EALAA  Y+     E   T  C     L    +NPA A L Y+ TSG  D T TTRTSVKFFA+LL   Q++       + G           V    L P        LR+LV+GLG RHALR + +++ G  G CIAPRWRDG MP
Sbjct:   51 CRSFQAFGDMSDEALAAMGYKA----ETLATGNCDVQRLLADLVANPAGAGLLYETTSG--DVTLTTRTSVKFFAELLRD-QILERLVRVTNVGSQTNHC---HLVA---LGPDGFFLCTYLRILVEGLGYRHALRAIHDADLGFTGACIAPRWRDGIMP 197          
BLAST of mRNA_C-linearis_contig8.15800.1 vs. uniprot
Match: A0A6H5KGZ7_9PHAE (MULE domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGZ7_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 3.750e-18
Identity = 66/151 (43.71%), Postives = 78/151 (51.66%), Query Frame = 0
Query:   14 MSTEALAATAYQGRHSGEGYVTTMCKAS--LPGWWSNPASARLCYDPTSGGDDGTWTTRTSVKFFADLLEGGQVVGLQYSCASPGPSRTRVGDPSTVTSSPLDPMASSSARALRLLVDGLGCRHALRVMRESNFGLNGGCIAPRWRDGTMP 162
            MS EALAA  Y+     E   T  C     L    +NPA A L Y+ TSG  D T TTRTSVKFFA+LL   QV+       + G           V    L P        LR+LV+GLGC HALR + +++ G  G CIAPRWRDG MP
Sbjct:  251 MSDEALAAMGYKA----ETLATGNCDVQRLLADLVANPAGAGLLYETTSG--DVTLTTRTSVKFFAELLRD-QVLERLVRVTNVGSQTNHC---HLVA---LGPDGFFLYTCLRILVEGLGCGHALRTIHDADLGFTGACIAPRWRDGIMP 388          
BLAST of mRNA_C-linearis_contig8.15800.1 vs. uniprot
Match: A0A6H5K2Y1_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Y1_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 7.360e-15
Identity = 61/153 (39.87%), Postives = 75/153 (49.02%), Query Frame = 0
Query:    7 SAFAMQGMSTEALAATAYQGRHSGEGYVTTMCKASLPGWWSNPASARLCYDPTSGGDDGTWTTRTSVKFFADLLEGGQVVGLQYSCASPGPSRTRVGDPSTVTSSPLDPMASSSARALRLLVDGLGCRHALRVMRESNFGLNGGCIAPRWRDG 159
            SA+AM+ MS EALAA  Y       G      +  L    +NPA A L Y     G D T TTRTS+KFFA+LL   QVV       +   S+T+           L P        LR+  DGLGCRHALR +++ + G  G  IA RWR G
Sbjct:  425 SAYAMKDMSDEALAAMGYTAHTLATG--NDNVQRLLADLGANPAGAGLLYGTGEEGADITLTTRTSIKFFAELLRD-QVVDRLVRVTNTFGSQTQY-----CHLVALGPDGFFLCTCLRIPTDGLGCRHALRALKDGDVGFTGASIANRWRAG 569          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15800.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5JI64_9PHAE1.600e-4359.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYV9_9PHAE1.460e-3550.91SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KFX3_9PHAE9.990e-3449.70SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KQR1_9PHAE2.900e-3148.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KN91_9PHAE3.000e-2754.31SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KKK0_9PHAE1.310e-2652.10SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K1S8_9PHAE2.170e-2243.21SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JPJ2_9PHAE3.700e-1842.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGZ7_9PHAE3.750e-1843.71MULE domain-containing protein (Fragment) n=1 Tax=... [more]
A0A6H5K2Y1_9PHAE7.360e-1539.87SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..162
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..11

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:3565581..3566379 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15800.1mRNA_C-linearis_contig8.15800.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 3565171..3568703 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15800.1 ID=prot_C-linearis_contig8.15800.1|Name=mRNA_C-linearis_contig8.15800.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=163bp
MRHAQCSAFAMQGMSTEALAATAYQGRHSGEGYVTTMCKASLPGWWSNPA
SARLCYDPTSGGDDGTWTTRTSVKFFADLLEGGQVVGLQYSCASPGPSRT
RVGDPSTVTSSPLDPMASSSARALRLLVDGLGCRHALRVMRESNFGLNGG
CIAPRWRDGTMP*
back to top