prot_C-linearis_contig8.15719.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15719.1
Unique Nameprot_C-linearis_contig8.15719.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length745
Homology
BLAST of mRNA_C-linearis_contig8.15719.1 vs. uniprot
Match: D8LLY2_ECTSI (30S ribosomal protein S1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLY2_ECTSI)

HSP 1 Score: 1164 bits (3012), Expect = 0.000e+0
Identity = 640/757 (84.54%), Postives = 677/757 (89.43%), Query Frame = 0
Query:    1 MRTVAMNLPLAVLMGLAGSSTAFLQSVRPTNFVVPAHKYNAAVSRARAV-QPR-AALAARNMRIMSAAVDTETDADTAGATSAVE-------IPVAVEDTISPALEDDEDVVSIALEDIVVGDEYEGVVNNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDTVRVRVLNVDGEARKLVLSMRQKPRAATSEQGDVSKYAEMLAEDPSQFISAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVSDVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGETARAAPVAAIKDVSHLSGADPAEFRKGTVSAVAEYGLFVNIEGVDGLLHISKMSPDRSVTSENIHSTYSEGQEVDIRIMEVNTANNKMSLSMLPATEEADFGRYTSMSPEEWLEGTVVSIMNYGAFVRLEGDVDGMVHISQLDPHGERVDSVYNAVEIGQAVRVRILEADPIARKLRLTMREEGYEGATGGS----DLGGGDRRGMKKVKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQVGQDVQVRVIEVDVDNCRLGLSMREPRQGGGRAGSGSRGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMAVGRVDSVEDVCEIGQEVQVRISDINTDNNTVNLSMVPAGAYDDRSGGGYGNDEGXXXXXXXXXXXXXXXXXXXGMDSAAFGREDFADTAQGXXXXXXXADWQQFLNNYFDDKE 744
            MRTV +NLPLAV++GLAGSSTAFLQSVRPTNFVVPAHKYNAAVSR RA  QPR AA   R MRIMSAAVD ET+   A A + +E       +       ISPA+EDD+D VSIALEDIVVG+EYEGV+NNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGD VRVRVLNVDGEARKLVLSMRQKPR++++EQG+V KYA+MLAEDPSQF+SAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHV+DVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGE  R+APVAA KDVSHL+G+DP EFRKGTVSAVA+YGLFVNIEGVDGLLH+SKMS DRS+TSENIHS Y EGQEV+IRIMEVNTANNKMSLSMLP TEEADFGRYT++  EEWLEGTVVSIMNYGAFVRL+GDVDGMVHISQLDPHGERVDSVYN+VEIGQ VRVRILEADP +RKLRLTMREEGYEGATGG+         DRRG KK KSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQ+GQ+VQVRVIEVDVDNCRLGLSMREPRQ   R   G+RGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMA+GRVDSVEDVCE+GQEVQVRISDINTDNNTVNLSMVPAGAYDDRSGGGYG DEG             XXXXX  MDSAAFGREDFADT Q XXXXXXXADWQQFLNNYFDDKE
Sbjct:    1 MRTVRVNLPLAVMLGLAGSSTAFLQSVRPTNFVVPAHKYNAAVSRTRAAAQPRPAAATGRGMRIMSAAVD-ETETTEAAAEATLEEXXXXXPVXXXXXXPISPAMEDDDDAVSIALEDIVVGEEYEGVINNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDMVRVRVLNVDGEARKLVLSMRQKPRSSSAEQGNVQKYADMLAEDPSQFVSAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVADVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGEAPRSAPVAATKDVSHLAGSDPTEFRKGTVSAVADYGLFVNIEGVDGLLHVSKMSTDRSITSENIHSHYEEGQEVEIRIMEVNTANNKMSLSMLPPTEEADFGRYTNVPSEEWLEGTVVSIMNYGAFVRLDGDVDGMVHISQLDPHGERVDSVYNSVEIGQDVRVRILEADPSSRKLRLTMREEGYEGATGGNMGXXXXXXXDRRGTKKAKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQIGQEVQVRVIEVDVDNCRLGLSMREPRQNSPR---GARGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMAIGRVDSVEDVCEMGQEVQVRISDINTDNNTVNLSMVPAGAYDDRSGGGYG-DEGFGAEGGRRGRGGGXXXXX--MDSAAFGREDFADTTQ-XXXXXXXADWQQFLNNYFDDKE 749          
BLAST of mRNA_C-linearis_contig8.15719.1 vs. uniprot
Match: A0A836CHC1_9STRA (30S ribosomal protein S1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHC1_9STRA)

HSP 1 Score: 524 bits (1350), Expect = 5.930e-174
Identity = 331/753 (43.96%), Postives = 449/753 (59.63%), Query Frame = 0
Query:    1 MRTVAMNLPLAVLMGLAGSSTAFLQSVRPTNFVVPAHKYNAAVSRARAVQPRAALAARNMRIMSAAVDTETDADTAGATSAVEIPVAVEDTISPALEDDEDVVSIALEDIVVGDEYEGVVNNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDTVRVRVLNVDGEARKLVLSMRQKPRAATSEQ-GDVSKYAEMLAEDPSQFISAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVSDVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGETARAAPVAAIKDVSHLSGADPAEFRKGTVSAVAEYGLFVNIEGVDGLLHISKMSPDRSVTSENIHSTYSEGQEVDIRIMEVNTANNKMSLSMLPATEEADFGRYTSMSPEEWLEGTVVSIMNYGAFVRLEGDVDGMVHISQLDPHGE-RVDSVYNAVEIGQAVRVRILEADPIARKLRLTMREEGY-EGATGGSDLGGGDR-RGMKKVKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQVGQDVQVRVIEVDVDNCRLGLSMREPRQGGGRAGSGSRGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIEGN--IDGLVHISEMAVGRVDSVEDVCEIGQEVQVRISDINTDNNTVNLSMVPAGAYDDRSGG---GYGNDEGXXXXXXXXXXXXXXXXXXXGMDSAAFGREDFADTAQGXXXXXXXADWQQFLNNYFDDKE 744
            MR V++ L  AVL+GL   S AF  +      VV  H+ N A+S  R+              +S  + T   AD A  ++A                         L D+VVG +YEGVV+NV++YGAFVDIG E NGLVHISQLAD FV+N  + V EGD+V V+VL++D   +KLVL+MR  PRAA  +Q  D+S YAE+LA DP + +   VE++V YGAF  L +GCSGF+HISQ+ P  E VS+VSDV+TVGQ V VR+R+VD+ L R+N+SLLP     +A     AA KDVS L+ AD A FR GTVSAV +YG FV ++GVDGLLHISK+    ++T   +    S GQEV +RI+ V+ A NK+SL+M+    E D     + SPEEW+EG+VVS   YGAFV L   +DGMVHIS+L   GE RVD+V + + +G AV+VR++E  P ARK+RL+MRE G  E A  G+  GG  R RG +  K V  +  +  EEW+ G+V S T FGAFVA+    DGLLH+S++A   V   +D L  GQ+++VRVI+VD +  R+GLS+R+ R+        +   +D+SVL G D   F+PG V S+V YG FV ++    I+GL+H+S+++  RV+ V DV   G +VQVR+ +++ D   VNLSM+P G+  DRS     G G D                       +       D+ D+A         ADWQ++LN YF+ K+
Sbjct:    1 MRCVSVPLQTAVLLGLVSGSAAFAFAPN-AKVVVHQHRLNRAISNTRSR-------------LSVRMSTVAPADLADNSAAAS--------------------KTLLADLVVGQQYEGVVSNVLSYGAFVDIGAEANGLVHISQLADAFVSNPTEIVAEGDSVSVKVLSIDQAEKKLVLTMRTSPRAAHIQQEADLSPYAEILATDPGRMLPGTVESVVRYGAFVRLAEGCSGFLHISQLKPRAERVSNVSDVVTVGQEVQVRLRDVDQDLKRVNLSLLPLSGATSA-----AATKDVSPLASADRATFRAGTVSAVHDYGAFVAVDGVDGLLHISKIEEGVALTPAQLRERLSVGQEVSVRILSVDVAANKLSLTMIADKPEPDLSALAARSPEEWIEGSVVSTTTYGAFVHLGDGIDGMVHISEL---GEGRVDAVTDVLNVGDAVKVRVIEVVPAARKVRLSMREFGAAEAAPRGAASGGARRGRGARGPKDVSAYAAMGAEEWVEGKVVSFTPFGAFVALPGGVDGLLHVSEMASGRVEAPQDVLSEGQEIKVRVIDVDTEAGRIGLSLRQARR--------APVSRDLSVLAGVDTTAFVPGTVTSVVSYGCFVALDDTPGIEGLLHVSQLSEDRVEEVGDVVAEGDKVQVRVVEVDLDAGKVNLSMLPVGSAKDRSRNARRGTGEDGAADDASDPFGTGERRKSPRPRFN-------DYEDSA--LNVGGGEADWQKYLNQYFEKKD 694          
BLAST of mRNA_C-linearis_contig8.15719.1 vs. uniprot
Match: A0A835YL04_9STRA (30S ribosomal protein S1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL04_9STRA)

HSP 1 Score: 444 bits (1143), Expect = 2.260e-142
Identity = 285/711 (40.08%), Postives = 403/711 (56.68%), Query Frame = 0
Query:    1 MRTVAMNLPLAVLMGLAGSSTAF--LQSVRPTNFVVPAHKYNAAVSRARAVQPRAALAARNMRIMSAAVDTETDADTAGATSAVEIPVAVEDTISPALEDDEDVVSIALEDIVVGDEYEGVVNNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDTVRVRVLNVDGEARKLVLSMRQKPR--AATSEQGDVSKYAEMLAEDPSQFISAKVENIVSYGAFFGLEDG------------CSGFVHISQMSPTGEHVSDVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGETARAAPVAAIKDVSHLSGADPAEFRKGTVSAVAEYGLFVNIEGVDGLLHISKMSPDRSVTSENIHSTYSEGQEVDIRIMEVNTANNKMSLSMLPATEEADFGRYTSMSPEEWLEGTVVSIMNYGAFVRLEGDVDGMVHISQLDPHGERVDSVYNAVEIGQAVRVRILEADPIARKLRLTMREEGYEGATGGSDLGGGDRRGMKKVKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQVGQDVQVRVIEVDVDNCRLGLSMREPRQG--------GGRAGSGSRGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIE--GNIDGLVHISEMAVGRVDSVEDVCEIGQEVQVRISDINTDNNTVNLSMVPAGAYDDRSGGGYGNDEG 685
            MR   ++LP AVL+GL   S  F  L S R  +  VPA +++AAVS +R  + R A+    M I S              T AV +PVA E    P            L D+ +G  Y+G+VNNVV YG FVDIG  VNGLVH SQL++ FV N +  V +GD+V VRV+ +D +AR+L LSMR   R  A      DV+ YA  LA DP++FI   V+ ++  GAF  L  G              GF+H SQ+ P  E V D  D L+ GQ V VRIREVD +L RI++SLLP  +G    ++  +A +DVS + GADPAEFR GTV ++ EYG+FV ++GVDGLLH S++   R ++   + + ++ GQ+V +R+  V+TA N++SLSM+P     D  R+ ++ P+ W++G V +   +GAFV +   VDG+VHISQL    +   +V + V +G AVRVR++E DP  R                         R  + VK V +++   PE W+ G VA++  FGAFV +D   DGL+H SQI        ED L  GQ V+VRV+  D +  RL LSM +P +         G R  SGS   +DVSVL G DPD F+ G V S++P+G FV ++  G + GL+H+SE++ GRV+ V +V   G  ++VR+ +++T    ++LSM+  G+  DR+  G G+D G
Sbjct:    1 MRCPRVSLPSAVLLGLVLRSHGFVVLSSTRQ-HIHVPARQHSAAVSCSRCSRNRRAVL---MYISS--------------TEAVSLPVAEE---RPE--------KTKLSDLQLGVMYQGIVNNVVDYGVFVDIGASVNGLVHKSQLSNTFVTNPEKIVSQGDSVTVRVIGIDVDARRLSLSMRAGGRRMAHALSADDVAPYAAQLAADPARFIVGTVQLVLRSGAFVALAGGGEGGXXXXXXXXAVGFLHASQLRPRPERVEDARDALSAGQEVQVRIREVDVELRRISLSLLPLPEGGDGGSSGSSAQRDVSRIEGADPAEFRAGTVVSLTEYGVFVALDGVDGLLHYSQIEEGRQLSPAELRARFAVGQDVSVRVRRVDTAANRLSLSMVPPRAPPDLSRFAALPPDAWIDGAVAATTAFGAFVTIGDGVDGLVHISQLSDEDDFPSAVTDVVNVGDAVRVRVIEVDPERRXXXXXXXXXXXXXXXXXXXXXXXXXR--RGVKDVSRYVGADPEAWVDGMVATVVPFGAFVTLDGGVDGLVHASQICGG--GGAEDALSAGQAVRVRVVGADAERGRLELSMLDPTEAAAXXXXTAGRRQRSGSEAPRDVSVLAGADPDAFVTGTVTSVLPFGCFVALDDVGGLQGLLHVSELSEGRVEDVGEVVAEGDRLEVRVVEVDTSTGKISLSMLQPGSAKDRAHRGGGSDGG 678          
BLAST of mRNA_C-linearis_contig8.15719.1 vs. uniprot
Match: A0A2N1PT36_9BACT (Uncharacterized protein n=1 Tax=Candidatus Wallbacteria bacterium HGW-Wallbacteria-1 TaxID=2013854 RepID=A0A2N1PT36_9BACT)

HSP 1 Score: 216 bits (550), Expect = 5.820e-56
Identity = 151/462 (32.68%), Postives = 244/462 (52.81%), Query Frame = 0
Query:  112 VGDEYEGVVNNVVTYGAFVDIGTEVNGLVHISQLA-DEFVANCDDHVKEGDTVRVRVLNVDGEARKLVLSMRQKPRAATSEQGDVSKYAEMLAEDPSQFISAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVSDVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGETARAAPVAAIKDVSHLSGADPAEFRKGTVSAVAEYGLFVNIE-GVDGLLHISKMSPDRSVTSENIHSTYSEGQEVDIRIMEVNTANNKMSLSMLPATEEADFGRYTSMSPEEWLEGTVVSIMNYGAFVRLEGDVDGMVHISQLDPHGERVDSVYNAVEIGQAVRVRILEADPIARKLRLTMREEGYEGATGGSDLGGGDRRGMKKVKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQVGQDVQVRVIEVDVDNCRLGLSMRE 571
            VG E EGVV N+V YGAFV+I   + GLVH S ++    V N  D VK G+ VRVRVL +D + +K+ L M+Q     T +  D  K    +       +  K+ N+VSYGAF  LE G  G VH+S MS T + V    +++  G+ VDVRI E+D    +I+  +      + A A P + I         D  E   G V+ +  +G+FV +E G++GL+H+S +S  + +   N     + G EV ++++++   + K+SL +   + +      T     E   GTV ++ N+GAFV L+  V+G+VHIS +    E++D     ++    +RV++LE +   +K+ L +++               D   + + K  E  +       + G V  IT FGAFV ++D  +GL+HISQ+++ HV  VED + +G  ++V++IE+  D  +L LS+R+
Sbjct:  339 VGTEVEGVVRNIVNYGAFVEIEPGLEGLVHHSDMSWTRRVNNPKDFVKSGEEVRVRVLEIDLDQKKISLGMKQ----LTPDPWDDIK----IRYKVDDVVKGKITNVVSYGAFVELEPGLEGLVHVSDMSWT-KRVKHPDEIVRAGEDVDVRILEIDVDKRKISFGI------KQATADPWSIIG-----KSYDIGEIYTGKVTNITNFGIFVELEEGIEGLVHVSDISWTQKIV--NPAGVCAIGDEVKVKVLDIKPGDKKISLGIKQVSADPWSSVETEFKVGETYTGTVKNLTNFGAFVELKDGVEGLVHISDMS-WTEKIDHPSQILKSSDKIRVKVLEINTSDKKISLGLKQLVL------------DPWAVFEEKYHEGMI-------VDGEVLRITSFGAFVRIEDGIEGLVHISQLSDKHVEKVEDVVAIGDRIRVKIIEIKDDERKLRLSLRD 758          
BLAST of mRNA_C-linearis_contig8.15719.1 vs. uniprot
Match: A0A1V5US35_9BACT (30S ribosomal protein S1 n=1 Tax=bacterium ADurb.Bin243 TaxID=1866936 RepID=A0A1V5US35_9BACT)

HSP 1 Score: 199 bits (506), Expect = 1.760e-50
Identity = 141/546 (25.82%), Postives = 271/546 (49.63%), Query Frame = 0
Query:  113 GDEYEGVVNNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKE-GDTVRVRVLNVDGEARKLVLSMRQKPRAATSEQGDVSKYAEMLAEDPSQFISAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVSDVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGETARAAPVAAIKDVSHLSGADPAEFRKGTVSAVAEYGLFVNIE-GVDGLLHISKMSPDRSVTSENIHSTYSEGQEVDIRIMEVNTANNKMSLSMLPATEEADFGRYTSMSPEEWLEGTVVSIMNYGAFVRLEGDVDGMVHISQLDPHGERVDSVYNAVEIGQAVRVRILEADPIARKLRLTMREEGYEGATGGSDLGGGDRRGMKKVKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIA-EDHVSNVEDHLQVGQDVQVRVIEVDVDNCRLGLSMREPRQGGGRAGSGSRGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMAVGRVDSVEDVCEIGQEVQVRISDI 655
            G    G V +   YGAF+DIG  ++GL+HI+ ++   V+N  D V   G  +  +VL +D + +K+ L ++Q  +    E GD  K  E+            V+NI  YG F  LE G  G +H+S +S +G   +  +D  + GQ +  ++ +V+ ++ +I + +    +    +         +++           G + ++  YG+FV +E G++G +HIS +S  + +   +       G  +++++++++    K++L +     +      +    E+ +EG V ++  +GAFV LE  ++G++HIS L    +R++     ++ G  V+V+I+E +P  +K+ L+     Y+  T                  +E    +     + G++     FGAFV V++  +GLLH S +A     S+  + L+ G+ ++V V+ +D DN ++ L +++  Q              ++     D  E + G+V SI  YGAF+  +  I+GL+HIS++A  RVD VE+V + GQ+V+V++ ++
Sbjct:  213 GSTVAGTVKSFTEYGAFIDIGG-IDGLLHITDMSYGHVSNPADVVSSIGSQITCKVLKLDRKTKKISLGLKQLSKNPWEEVGDKYKVGEIY--------ECTVKNIADYGVFATLEPGVDGLIHVSDLSWSGR--TRPNDFKS-GQKIKAKVIDVNLEIKKIKLGIKQVTKDPWEKVTETYPENTITN-----------GKIKSILNYGVFVELEDGIEGFIHISNISWTKKINHPS--ELLKVGDSIEVKVLKLDLETKKINLGIKQTHVDPWTMVESKFKVEQIVEGKVTNVKKFGAFVELEEGIEGLIHISDLS-WTKRLNHANEMLKTGDPVKVKIIEINPAEKKIALS-----YKHLT------------KDPWSDIETRFPIGAT--VEGKITHFASFGAFVEVEEGVEGLLHTSDLAWNKKYSDPSEVLKEGETIKVLVLNIDKDNRKMSLGVKQLAQ-----------DPLIAYKEKMDSGEMLDGKVKSIQEYGAFIEFDDGIEGLIHISQLADERVDKVENVVKAGQQVKVKVIEV 702          
BLAST of mRNA_C-linearis_contig8.15719.1 vs. uniprot
Match: A0A2V9LYV5_9BACT (30S ribosomal protein S1 (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9LYV5_9BACT)

HSP 1 Score: 195 bits (495), Expect = 2.700e-49
Identity = 152/566 (26.86%), Postives = 273/566 (48.23%), Query Frame = 0
Query:  113 GDEYEGVVNNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDTVRVRVLNVDGEARKLVLSMRQKPRAATSEQGDVSKYAEMLAEDP----------SQFISAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVSDVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGETARAAPVAAIKDVSHLSGADPAEFRKGTVSAVAEYGLFVNIE-GVDGLLHISKMSPDRSVTSENIHSTYSEGQEVDIRIMEVNTANNKMSLSMLPATEEADFGRYTSMSPEEWLEGTVVSIMNYGAFVRLEGDVDGMVHISQLDPHGERVDSVYNAVEIGQAVRVRILEADPIARKLRLTMREEGYEGATGGSDLGGGDRRGMKKVKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIA-EDHVSNVEDHLQVGQDVQVRVIEVDVDNCRLGLSMREPRQGGGRAGSGSRGKKDVSVLLGRDPDEFIPGRVVSIVPYGAFVNIEGNIDGLVHISEMAVGRVDSVEDVCEIGQEVQVRISDINTDNNTVNLSM 666
            G   EGVV N+  YGAF+D+G  V+GL+HI+ ++   V +  +    GD ++V+V+  + E  ++ L  +Q                  L+EDP          +  +  KV ++  YGAF  LE G  G +HIS+M+   + V   S +++V ++VDV I ++D +  RI++ L      +     P   ++     S   P     G V  V ++G+FV +E G+DGL+HI+ MS  R      + +    G ++ +++++ N  + ++SL     +E+              ++G VVS+ +YGAFV LE  ++G++HIS++    +RV      V + + V V IL+ D  AR++ L +++               +      ++S       +P   I+G+V ++T FG FV V++  DGL+H+S ++    V +  +  + G +VQ  ++ +D  N +L L +++               +        +  + + G VV I  +GAFV +   I+GL H+SE+    VD   +    GQEV+++I  +N     + LS+
Sbjct:  166 GKVMEGVVKNITDYGAFIDLGG-VDGLLHITDMSWGRVNHPSELFNVGDKIKVKVIKFNREDGRVSLGYKQ------------------LSEDPWLHADMRYPKNLRVQGKVVSLTDYGAFVELEPGIEGLIHISEMT-WNKRVKHPSKIVSVNEMVDVVILDIDTEARRISLGL------KQTEPNPWDVME-----SRYTPGTVITGKVRNVTDFGVFVEVEDGIDGLVHITDMSWGRVNHPSELFNV---GDKIKVKVIKFNREDGRVSLGYKQLSEDPWLHADMRYPKNLRVQGKVVSLTDYGAFVELEPGIEGLIHISEMT-WNKRVKHPSKIVSVNEMVDVVILDIDTEARRISLGLKQT--------------EPNPWDVMES-----RYTPGTVITGKVRNVTDFGVFVEVEEGIDGLVHVSDMSWTKRVKHPSELFKKGDEVQAVILSIDAANQKLSLGIKQLEP-----------DRWEDWFSRHNVGDVVRGNVVRITNFGAFVELADGIEGLCHVSELDEKHVDKPAEFLAAGQEVEMKIIKLNLQEKKIGLSL 666          
BLAST of mRNA_C-linearis_contig8.15719.1 vs. uniprot
Match: A0A847LEK2_9BACT (Cytidylate kinase n=1 Tax=Candidatus Riflebacteria bacterium TaxID=2053586 RepID=A0A847LEK2_9BACT)

HSP 1 Score: 192 bits (489), Expect = 8.850e-48
Identity = 137/466 (29.40%), Postives = 244/466 (52.36%), Query Frame = 0
Query:  113 GDEYEGVVNNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDTVRVRVLNVDGEARKLVLSMRQKPRAATSEQGDVSKYAEMLAEDPSQFISAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVSDVSDVLTVGQVVDVRIREVDEKLGRINMSL---LPYGQGETARAAPVAAIKDVSHLSGADPAEFRKGTVSAVAEYGLFVNI-EGVDGLLHISKMSPDRSVTSENIHSTYSEGQEVDIRIMEVNTANNKMSLSMLPATEEADFGRYTSMSPEEWLEGTVVSIMNYGAFVRLEGDVDGMVHISQLDPHGERVDSVYNAVEIGQAVRVRILEADPIARKLRLTMR---EEGYEGATGGSDLGGGDRRGMKKVKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQVGQDVQVRVIEVDVDNCRLGLSMRE 571
            GD  +GVV+ +V YGAF+D+G  V GL+H + L+   +AN  + V+ G  +  ++L +D E  K+ L ++QK        G V +  E+     ++    KV+N++ +GAF  LE+G  G VHIS +S    +V    D++  G+V+ V ++E+D+   RI++S    LP+          +               +  KG V+ + ++G FV I EG++GLLHIS M   + +          +GQEV+++I+ +++ N ++SL +   T +            + L G V ++++YGAFV+LE  ++G++HIS+     +  D     +++G  V V + E D   +K+ L++R   ++ ++G          +RR    V SV+Q           G++ S+ + GA V + ++  G +HISQIA+  V +  + ++ G  V V+V+E+D  N +L LS++E
Sbjct:  447 GDTIKGVVSRIVEYGAFIDLGDGVEGLIHRNDLSWSVIANPREVVQPGQEIEAKILKIDNEKGKIALGLKQKKEDPW---GTVDQRYEV-----NRKYQGKVKNLMDFGAFVELEEGVEGLVHISDLS-WARNVRHPQDIVKSGEVITVLVKEIDKTKKRISLSYKDTLPHPWDNIEHKYKIG--------------DLVKGKVNNLTDFGAFVEISEGIEGLLHISDMDWVKKINHPK--EVLEKGQEVEVKILNIDSHNRRLSLGLKQTTSDPWGDLEKMFKIGDVLTGVVKNLVSYGAFVQLENGLEGLLHISEFSWQNDVKDPA-EVLKVGDQVTVAVYELDKHKQKIGLSLRRVSDDPWKGI---------ERR--FPVNSVQQ-----------GKIVSVENSGAEVELAENVRGFIHISQIAQVRVQHPSEAVKEGDVVNVKVLELDRKNRKLKLSIKE 864          
BLAST of mRNA_C-linearis_contig8.15719.1 vs. uniprot
Match: A0A367ZTI6_9BACT (Cytidylate kinase n=1 Tax=Candidatus Ozemobacter sibiricus TaxID=2268124 RepID=A0A367ZTI6_9BACT)

HSP 1 Score: 190 bits (482), Expect = 7.080e-47
Identity = 136/466 (29.18%), Postives = 244/466 (52.36%), Query Frame = 0
Query:  113 GDEYEGVVNNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDTVRVRVLNVDGEARKLVLSMRQK---PRAATSEQGDVSKYAEMLAEDPSQFISAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVSDVSDVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGETARAAPVAAIKDVSHLSGADPAEFRKGTVSAVAEYGLFVNI-EGVDGLLHISKMSPDRSVTSENIHSTYSEGQEVDIRIMEVNTANNKMSLSMLPATEEADFGRYTSMSPEEWLEGTVVSIMNYGAFVRLEGDVDGMVHISQLDPHGERVDSVYNAVEIGQAVRVRILEADPIARKLRLTMREEGYEGATGGSDLGGGDRRGMKK---VKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQVGQDVQVRVIEVDVDNCRLGLSMRE 571
            GD  +GVV+ +V YGAFVD+G  V GL+H + L+   + N  + V+ G  +  ++L +D E  K+ L ++QK   P     ++ +V +  +            KV+N++ +GAF  LE+G  G VHIS +S    +V   SD++  G  + V ++E+D+   RI++S       +  +  P   I+    +      +  KG V+ + ++G FV I EG++GLLHIS M   + V          +GQEV+++I+ +++ N ++SL +   T +            + + G V ++++YGAFV+LE  ++G++HIS+     +  D   + +++G  V V I E D   +K+ L++R  G +             +G++K   V S++Q           G+V  I + GA V + ++  G +H+SQIA++ V +  + ++ G  V V+V+E+D  N +L LS++E
Sbjct:  446 GDLIKGVVSRLVEYGAFVDLGDGVEGLIHRNDLSWSVITNPREVVQPGQEIEAKILKIDHEKGKISLGLKQKKEDPWVTVDQRYEVGRKYQ-----------GKVKNLMDFGAFVELEEGVEGLVHISDLS-WARNVRHPSDIVKSGDTITVLVKEIDKAKKRISLSY------KETQPHPWENIEQRFKVG-----DLVKGRVNNLTDFGAFVEIAEGIEGLLHISDMDWVKKVNHPK--EILEKGQEVEVKILNIDSHNRRLSLGLKQTTNDPWTDLDKLFKVGDIVTGVVKNLVSYGAFVQLENGLEGLLHISEFSWQNDVKDPA-DVLKVGDQVTVAIYELDKYKQKIGLSLRRVGED-----------PWKGIEKRFPVNSLQQ-----------GKVIHIENSGAEVELAENVRGFIHVSQIAQERVQHPSEAVKEGDIVTVKVLEIDRKNRKLKLSIKE 863          
BLAST of mRNA_C-linearis_contig8.15719.1 vs. uniprot
Match: A0A847HL75_9BACT (S1 RNA-binding domain-containing protein n=1 Tax=Candidatus Riflebacteria bacterium TaxID=2053586 RepID=A0A847HL75_9BACT)

HSP 1 Score: 184 bits (466), Expect = 1.860e-46
Identity = 131/467 (28.05%), Postives = 237/467 (50.75%), Query Frame = 0
Query:  112 VGDEYEGVVNNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDTVRVRVLNVDGEARKLVLSMRQK---PRAATSEQGDVSKYAEMLAEDPSQFISAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVSDVSDVLTVGQVVDVRIREVDEKLGRINMS---LLPYGQGETARAAPVAAIKDVSHLSGADPAEFRKGTVSAVAEYGLFVNIE-GVDGLLHISKMSPDRSVTSENIHSTYSEGQEVDIRIMEVNTANNKMSLSMLPATEEADFGRYTSMSPEEWLEGTVVSIMNYGAFVRLEGDVDGMVHISQLDPHGERVDSVYNAVEIGQAVRVRILEADPIARKLRLTMREEGYEGATGGSDLGGGDRRGMKKVKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQVGQDVQVRVIEVDVDNCRLGLSMRE 571
            V D  +G V+ +V YGAFVD+G  V GL+H + L+   ++N  + V+ G+TV  R+L +D E  K+ L ++QK   P      +  V K               +V+N++ +GAF  LE+G  G VHIS +S    ++   S+V+  G  +D+ ++E+D++  RI++S   +LP+   E      +  +                G V+ + ++G F+ I+ G++GLLH+S M   + +          +GQEV ++I+ +++AN+++SL +   T +       +    + + G V +I+NYGAFV+LE  ++G++H+S+     E V++   A+++G  V V + E D   +K+ L++R                 R      + VE+      +    G++ ++   G  V V +   G +HISQ+A   V+   + ++ G  V  +V+E+D  N RL LS++E
Sbjct:   84 VDDMIKGTVSRIVEYGAFVDLGDGVEGLIHRNDLSWSVISNPREVVQPGETVEARILKMDVEKGKISLGLKQKKDNPWETVDGRYQVGKK-----------YHGRVKNLMDFGAFVELEEGIEGLVHISDLS-WARNIKHPSEVVASGAEIDIVVKEIDKEKKRISLSYKEVLPHPWDEVTSKYKIGDVVT--------------GKVNNMTDFGAFIEIQQGIEGLLHVSDMDWVKKINHPK--EVLEKGQEVKVKILNIDSANHRLSLGLKQTTTDPWETVENTYKVGDQVTGVVKNIVNYGAFVQLESGLEGLLHVSEFSWQNE-VENPAEALKVGDQVTVMVYEIDRNKQKIGLSLR-----------------RLQDDPWRDVER--KFGKDSVHQGKITNLLENGVEVEVTEGITGFVHISQLAAQRVNTPSEVVKAGDVVTYKVLELDRKNRRLKLSIKE 502          
BLAST of mRNA_C-linearis_contig8.15719.1 vs. uniprot
Match: A0A1V6A8G2_9BACT (Cytidylate kinase n=1 Tax=bacterium ADurb.Bin157 TaxID=1866935 RepID=A0A1V6A8G2_9BACT)

HSP 1 Score: 188 bits (477), Expect = 3.050e-46
Identity = 137/464 (29.53%), Postives = 235/464 (50.65%), Query Frame = 0
Query:  112 VGDEYEGVVNNVVTYGAFVDIGTEVNGLVHISQLADEFVANCDDHVKEGDTVRVRVLNVDGEARKLVLSMRQKPRAATSEQGDVSKYAEMLAEDPSQFISAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVSDVSDVLTVGQVVDVRIREVDEKLGRINMS---LLPYGQGETARAAPVAAIKDVSHLSGADPAEFRKGTVSAVAEYGLFVNI-EGVDGLLHISKMSPDRSVTSENIHSTYSEGQEVDIRIMEVNTANNKMSLSMLPATEEADFGRYTSMSPEEWLEGTVVSIMNYGAFVRLEGDVDGMVHISQLDPHGERVDSVYNAVEIGQAVRVRILEADPIARKLRLTMREEGYEGATGGSDLGGGDRRGMKKVKSVEQFLNLSPEEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQVGQDVQVRVIEVDVDNCRLGLSMRE 571
            V D  +G V+ +V YGAF+D+G  V GL+H + L+   ++N  + V+ GD V  ++L +D E  K+ L ++QK            K          Q    KV+N++ +GAF  LE+G  G VHIS +S    ++   + V+  G  +DV ++E+D++  RI++S   +LP+   + A    +  I                G V+ + ++G F+ I EGV+GLLHIS M   + V          +GQEV ++I+ ++ AN+++SL +   T +            E + G V +I++YGAFV+L   ++G++H+S+L    + V++   A+++G  V V + E D   +K+ L++R           D    D     +  S+ Q           G ++++   GA + V D   G +H+SQ+A   V+N  + ++VG  V  +V+E+D  N RL LS+RE
Sbjct:  440 VDDVIKGTVSRIVEYGAFIDLGDGVEGLIHRNDLSWSVISNPREVVQPGDEVEAKILKMDAEKGKISLGLKQKKENPWETVDTRYKVG--------QKYHGKVKNLMDFGAFVELEEGVEGLVHISDLS-WARNIDHPNQVVNTGDEIDVIVKEIDKEKKRISLSYKEVLPHPWEQVASQYTIGDIVT--------------GKVNNMTDFGAFIGIAEGVEGLLHISDMDWVKKVNHPK--EILEKGQEVSVKILNIDVANHRLSLGLKQTTVDPWERIEYEYKIGEQVTGVVKNIVSYGAFVQLANGIEGLLHVSELSWQND-VENPEQALKVGDQVTVIVYEIDKNKQKIGLSLRRL--------QDDPWKDVESRFRRDSIHQ-----------GTISNLLDNGAEIEVADGVIGFVHVSQLAAQRVNNPSEIVKVGDTVTYKVLELDRKNRRLKLSIRE 858          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15719.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLY2_ECTSI0.000e+084.5430S ribosomal protein S1 n=2 Tax=Ectocarpus TaxID=... [more]
A0A836CHC1_9STRA5.930e-17443.9630S ribosomal protein S1 n=1 Tax=Tribonema minus T... [more]
A0A835YL04_9STRA2.260e-14240.0830S ribosomal protein S1 n=1 Tax=Tribonema minus T... [more]
A0A2N1PT36_9BACT5.820e-5632.68Uncharacterized protein n=1 Tax=Candidatus Wallbac... [more]
A0A1V5US35_9BACT1.760e-5025.8230S ribosomal protein S1 n=1 Tax=bacterium ADurb.B... [more]
A0A2V9LYV5_9BACT2.700e-4926.8630S ribosomal protein S1 (Fragment) n=1 Tax=Acidob... [more]
A0A847LEK2_9BACT8.850e-4829.40Cytidylate kinase n=1 Tax=Candidatus Riflebacteria... [more]
A0A367ZTI6_9BACT7.080e-4729.18Cytidylate kinase n=1 Tax=Candidatus Ozemobacter s... [more]
A0A847HL75_9BACT1.860e-4628.05S1 RNA-binding domain-containing protein n=1 Tax=C... [more]
A0A1V6A8G2_9BACT3.050e-4629.53Cytidylate kinase n=1 Tax=bacterium ADurb.Bin157 T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022967RNA-binding domain, S1SMARTSM00316S1_6coord: 304..377
e-value: 3.5E-15
score: 66.5
coord: 596..667
e-value: 5.5E-18
score: 75.8
coord: 111..182
e-value: 4.5E-24
score: 96.0
coord: 392..465
e-value: 2.5E-15
score: 66.9
coord: 205..278
e-value: 2.4E-16
score: 70.3
coord: 499..570
e-value: 3.9E-17
score: 72.9
IPR003029S1 domainPFAMPF00575S1coord: 599..666
e-value: 1.4E-13
score: 51.0
coord: 308..376
e-value: 1.6E-13
score: 50.7
coord: 395..465
e-value: 2.5E-13
score: 50.1
coord: 502..570
e-value: 4.3E-16
score: 59.0
coord: 210..277
e-value: 2.5E-11
score: 43.8
coord: 112..182
e-value: 7.9E-18
score: 64.6
IPR003029S1 domainPROSITEPS50126S1coord: 598..667
score: 18.784
IPR003029S1 domainPROSITEPS50126S1coord: 501..570
score: 19.999
IPR003029S1 domainPROSITEPS50126S1coord: 113..182
score: 22.293
IPR003029S1 domainPROSITEPS50126S1coord: 394..465
score: 18.154
IPR003029S1 domainPROSITEPS50126S1coord: 306..377
score: 17.434
IPR003029S1 domainPROSITEPS50126S1coord: 207..278
score: 16.894
NoneNo IPR availableGENE3D2.40.50.140coord: 106..186
e-value: 1.1E-24
score: 88.1
coord: 304..384
e-value: 1.5E-16
score: 62.1
NoneNo IPR availableGENE3D2.40.50.140coord: 208..277
e-value: 4.3E-18
score: 67.0
NoneNo IPR availableGENE3D2.40.50.140coord: 497..575
e-value: 5.9E-23
score: 82.5
NoneNo IPR availableGENE3D2.40.50.140coord: 394..467
e-value: 6.6E-19
score: 69.5
coord: 597..668
e-value: 1.9E-21
score: 77.7
NoneNo IPR availablePANTHERPTHR10724:SF730S RIBOSOMAL PROTEIN S1, CHLOROPLASTICcoord: 308..381
coord: 109..190
NoneNo IPR availablePANTHERPTHR10724:SF730S RIBOSOMAL PROTEIN S1, CHLOROPLASTICcoord: 309..466
NoneNo IPR availablePANTHERPTHR10724S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1coord: 599..666
coord: 206..277
NoneNo IPR availablePANTHERPTHR10724:SF730S RIBOSOMAL PROTEIN S1, CHLOROPLASTICcoord: 599..666
coord: 206..277
NoneNo IPR availablePANTHERPTHR10724:SF730S RIBOSOMAL PROTEIN S1, CHLOROPLASTICcoord: 494..571
NoneNo IPR availablePANTHERPTHR10724S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1coord: 309..466
NoneNo IPR availablePANTHERPTHR10724S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1coord: 494..571
coord: 109..190
NoneNo IPR availablePANTHERPTHR10724S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1coord: 308..381
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..744
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.675
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 205..278
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 495..571
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 101..183
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 307..381
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 393..466
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 597..666

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:2881200..2889699 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15719.1mRNA_C-linearis_contig8.15719.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 2881053..2889796 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15719.1 ID=prot_C-linearis_contig8.15719.1|Name=mRNA_C-linearis_contig8.15719.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=745bp
MRTVAMNLPLAVLMGLAGSSTAFLQSVRPTNFVVPAHKYNAAVSRARAVQ
PRAALAARNMRIMSAAVDTETDADTAGATSAVEIPVAVEDTISPALEDDE
DVVSIALEDIVVGDEYEGVVNNVVTYGAFVDIGTEVNGLVHISQLADEFV
ANCDDHVKEGDTVRVRVLNVDGEARKLVLSMRQKPRAATSEQGDVSKYAE
MLAEDPSQFISAKVENIVSYGAFFGLEDGCSGFVHISQMSPTGEHVSDVS
DVLTVGQVVDVRIREVDEKLGRINMSLLPYGQGETARAAPVAAIKDVSHL
SGADPAEFRKGTVSAVAEYGLFVNIEGVDGLLHISKMSPDRSVTSENIHS
TYSEGQEVDIRIMEVNTANNKMSLSMLPATEEADFGRYTSMSPEEWLEGT
VVSIMNYGAFVRLEGDVDGMVHISQLDPHGERVDSVYNAVEIGQAVRVRI
LEADPIARKLRLTMREEGYEGATGGSDLGGGDRRGMKKVKSVEQFLNLSP
EEWISGRVASITHFGAFVAVDDDTDGLLHISQIAEDHVSNVEDHLQVGQD
VQVRVIEVDVDNCRLGLSMREPRQGGGRAGSGSRGKKDVSVLLGRDPDEF
IPGRVVSIVPYGAFVNIEGNIDGLVHISEMAVGRVDSVEDVCEIGQEVQV
RISDINTDNNTVNLSMVPAGAYDDRSGGGYGNDEGFGGDGGRPARGRGGG
RGRGGMDSAAFGREDFADTAQGGGDGGGGADWQQFLNNYFDDKE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022967S1_dom
IPR003029S1_domain
IPR012340NA-bd_OB-fold