prot_C-linearis_contig8.15710.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15710.1
Unique Nameprot_C-linearis_contig8.15710.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length196
Homology
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BLAST of mRNA_C-linearis_contig8.15710.1 vs. uniprot
Match: A0A6H5J7K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7K2_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 1.450e-12
Identity = 42/50 (84.00%), Postives = 42/50 (84.00%), Query Frame = 0 
Query:   87 PRGEAGERQAEAEAGPEDRLAPVGLSLPRAPVAPAVAPVGQGSGLVHLLG 136
            PRGEAGERQA  E GPEDRLAPVG SL  A VAPAVAPVGQGSGLV LLG
Sbjct:  160 PRGEAGERQATTEPGPEDRLAPVGPSLLGAQVAPAVAPVGQGSGLVDLLG 209
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15710.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5J7K2_9PHAE1.450e-1284.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:2783280..2784459 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15710.1mRNA_C-linearis_contig8.15710.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 2783280..2785012 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15710.1 ID=prot_C-linearis_contig8.15710.1|Name=mRNA_C-linearis_contig8.15710.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=196bp
SAKHGPLLVRRLQVQSNPVPANAPCSAAGRWDTEVPRANTHSQSGTGVCV
VSVHQAPAQHRPRPGPEVREVGIPAERVRVEPAVPRPRGEAGERQAEAEA
GPEDRLAPVGLSLPRAPVAPAVAPVGQGSGLVHLLGVAPPVLGPGSRGGG
EVISPLEVPSEHFFNLKVGRQKKSAIVAESSTTAKDPLVLLWWWL*
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