prot_C-linearis_contig8.15704.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15704.1
Unique Nameprot_C-linearis_contig8.15704.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length504
Homology
BLAST of mRNA_C-linearis_contig8.15704.1 vs. uniprot
Match: A0A6H5JEL3_9PHAE (Pre-mRNA-processing factor 19 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEL3_9PHAE)

HSP 1 Score: 692 bits (1786), Expect = 1.630e-246
Identity = 438/504 (86.90%), Postives = 459/504 (91.07%), Query Frame = 0
Query:    1 MQCAISGQTPETPVVSKKSGHVYEKRLIIKYIDAEGKCPATGEELTADDLLELHSDKAAKPRPVEAASIPGLLAVMQNEWDDLMLETHTLKQHLDQTRQELSQALYQNDAACRVIARLVRERDEARAXXXXXXXXXXXXXXXXXXXXXXXXXEMETEVDGEEGISAAVHTQMQAKWKELSKKRKKRAMPDDLASPETVSAWGEVSSNTLHKTSPKGITCLDLHPSKPNLLLTGGVDKTAIVFDRDTQAQVATLSGHTKRVTDACFHPTRELLLTASVDKTARVWQA--EEDGGGYKVAHVLDDHDGEVVGATXXXXXXXXXXXXKDKSWAFYDISRGRLLRHVKNDEYESGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKKCTKVFAVKTWGELASYDGYGGAVTGVKFGKSASFLATSSMDRTVRFFGTA 502
            MQCAISGQTPETPVVSKKSGH+YEKRLI+KYIDAEGKCPATGEELTADDLL++ S+ A KPRP EAASIPGLL+ +QNEWDDLMLET+TLKQHL+QTRQELSQ+LYQNDAACRVIARL RERDEA A    XXXXXXXXXXXXXXXXXX   EM+TE DGEEGIS +VH QMQAKWKELSKKRKKRAMPDDLAS ETVSAWGEVS NTLHKTSPKGITCLDLHPSKPNL+LTGGVDKTAIVFDRDTQAQVATLSGHTKR+TDACFHPTRELLLT+S DKTARVWQA  E DGGGYK  HVLDDHDGEVVGAT            KDKSWAFYDI+RGRLL+HVKNDEY  GYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGH   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKK TKVFAVKTWGELA+Y  YGG+VTGVKFGKSASFLATSSMDRT+RF+GTA
Sbjct:    1 MQCAISGQTPETPVVSKKSGHIYEKRLIVKYIDAEGKCPATGEELTADDLLDVRSEGAVKPRPAEAASIPGLLSFLQNEWDDLMLETYTLKQHLNQTRQELSQSLYQNDAACRVIARLHRERDEALAQVQAXXXXXXXXXXXXXXXXXXVE-EMQTEDDGEEGISPSVHAQMQAKWKELSKKRKKRAMPDDLASQETVSAWGEVSRNTLHKTSPKGITCLDLHPSKPNLVLTGGVDKTAIVFDRDTQAQVATLSGHTKRITDACFHPTRELLLTSSADKTARVWQAQAEGDGGGYKAVHVLDDHDGEVVGATVHATGDFMATASKDKSWAFYDINRGRLLKHVKNDEYSEGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKKRTKVFAVKTWGELATYGDYGGSVTGVKFGKSASFLATSSMDRTLRFYGTA 503          
BLAST of mRNA_C-linearis_contig8.15704.1 vs. uniprot
Match: A0A6V1T7M8_HETAK (Pre-mRNA-processing factor 19 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T7M8_HETAK)

HSP 1 Score: 416 bits (1068), Expect = 1.300e-137
Identity = 252/507 (49.70%), Postives = 325/507 (64.10%), Query Frame = 0
Query:    1 MQCAISGQTPETPVVSKKSGHVYEKRLIIKYIDAEGKCPATGEELTADDLLELHSDKAAKPRPVEAASIPGLLAVMQNEWDDLMLETHTLKQHLDQTRQELSQALYQNDAACRVIARLVRERDEARAXXXXXXXXXXXXXXXXXXXXXXXXXEMETEVDG-EEGISAAVHTQMQAKWKELSKKRKKRAMPDDLASPETVSAWGEVSSNTLHKTSPKGITCLDLHPSKPNLLLTGGVDKTAIVFDRDTQAQVATLSGHTKRVTDACFHP--TRELLLTASVDKTARVWQAEEDGGGYKVAHVLDDHDGEVVGATXXXXXXXXXXXXKDKSWAFYDISRG---RLLRHVKNDEYESGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GKKCTKVFAVKTWGELASYDGYGGAVTGVKFGKSASFLATSSMDRTVRFF 499
            M C+ISG+ P+ PV+S KSGH++EK LI KY+ +E  CP TG+EL+ +DL ++  +KA KPRP+ A SIPGLL + QNEWDDLMLETHTLK HLD TRQ+LSQALYQ+DAACRVIARL+RERDE +                           +E + +  EEGIS AV ++M  KWK+LSK+RKKR +PD LAS ET+S W   +S+T+HK+   GI CLDLHP+  +++LTGG+DK A++F++ ++  VA LSGH K+VT   FHP   R LL T S DKTA++W +   G  Y+    L DH  EVVGA+            KD++WAFYD+++G     L+ V++     G+ CV FHPDGLILGTGT DAL+RIWDMK   NVA+F+GH      XXXXXXXXXXXXXXXXXXXXXXXXX                                G    +++AVK W ELA+   +   VTGV+FG  A FLA++SMDR+++ F
Sbjct:    1 MHCSISGEVPKVPVISVKSGHLFEKHLIEKYLKSESTCPVTGDELSIEDLKDVKVNKAVKPRPLTATSIPGLLNLFQNEWDDLMLETHTLKSHLDSTRQQLSQALYQHDAACRVIARLIRERDELKTQLTMYKQQIAEAAAATPQIEVTSAPSLEVQEEKQEEGISDAVLSKMTRKWKQLSKERKKRGIPDSLASAETLSKWAAKASHTVHKSDKPGILCLDLHPTDQDMVLTGGMDKEAVLFNKTSEQVVAKLSGHGKKVTTCSFHPHADRNLLFTTSADKTAKIWGSS--GDAYECRMTLADHTAEVVGASVHATGDFLATASKDRTWAFYDVAQGGAATCLKIVQDPTVAGGFECVSFHPDGLILGTGTSDALIRIWDMKTQTNVASFEGHTGAVHAXXXXXXXXXXXXXXXXXXXXXXXXXRLKNFHNLDAGGTGGVGVRTVAFDRAGAYLACGGADIRLYAVKEWNELAALGAHEKPVTGVRFGPDAGFLASTSMDRSLKIF 505          
BLAST of mRNA_C-linearis_contig8.15704.1 vs. uniprot
Match: A0A835YI40_9STRA (Pre-mRNA-processing factor 19 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI40_9STRA)

HSP 1 Score: 403 bits (1035), Expect = 1.040e-132
Identity = 255/507 (50.30%), Postives = 308/507 (60.75%), Query Frame = 0
Query:    1 MQCAISGQTPETPVVSKKSGHVYEKRLIIKYIDAEGKCPATGEELTADDLLELHSDKAAKPRPVEAASIPGLLAVMQNEWDDLMLETHTLKQHLDQTRQELSQALYQNDAACRVIARLVRERDEARAXXXXXXXXXXXXXXXXXXXXXXXXXEMETEV--DGEEGISAAVHTQMQAKWKELSKKRKKRAMPDDLASPETVSAWGEVSSNTLHKTSPKGITCLDLHPSKPNLLLTGGVDKTAIVFDRDTQAQVATLSGHTKRVTDACFHPTRELLLTASVDKTARVWQAEEDGGGYKVAHVLDDHDGEVVGATXXXXXXXXXXXXKDKSWAFYDISRGRLLRHVKNDEYESGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKKCT---KVFAVKTWGELASYDGYGGAVTGVKFGKSASFLATSSMDRTVRFFGTA 502
            M CAISG+ PE PVVS+K+GH++E+RLI KYIDAEGKCP TGE L  DDL+++ S+K  +PRP  A SIPGLLA+MQNEWDDLM+ET+TLKQHLD TRQELSQALYQ DA+ RVIARL+RERDEAR             XXXXXXXXXXXX E+E  V  D    I+  V +++   WK L+K RKKR +P DL S + ++ W E SS TLHKT+P GITCL L P   +L LTGGVDKTAI+F+R++  Q A LSGH+K+V D  F    E+LLTAS D TA+ W  E       + H    H GEV                +DK+W F+++  G  LR VK + +E+GY C R+HPDGLILGTGTGDA VRIWDMK   NVA+FKGH                  XXXXXXXXXXXXX                                      +V  VK W    +   +   +TGV F  SA  LA +SMDRT+RFF  A
Sbjct:    1 MNCAISGEVPEVPVVSRKTGHLFERRLIEKYIDAEGKCPITGEPLGVDDLMDVKSNKVVRPRPATATSIPGLLALMQNEWDDLMVETYTLKQHLDTTRQELSQALYQQDASARVIARLMRERDEARQQLQAQRAALAQAXXXXXXXXXXXXMEVEPAVVEDIPAKIADTVMSELTNTWKALTKSRKKRVIPVDLVSADDMANWVEASSQTLHKTTPAGITCLALSPQDASLTLTGGVDKTAILFNRESGVQSALLSGHSKKVLDVAFGKGGEVLLTASADGTAKSWDLEG-----MLLHTFQGHKGEVTAICGHPTGRYAATAGRDKAWGFHELESGSCLRLVKEEGFEAGYECARWHPDGLILGTGTGDAQVRIWDMKTQNNVASFKGHEGGVVGSIAFSENGYYMAXXXXXXXXXXXXXRKLKNFHTLTLGSAAGTPVVVTFDHSGTYLAVSANTTIQVHVVKEWALATTLGQFKKPITGVAFAPSAKSLAATSMDRTLRFFEAA 502          
BLAST of mRNA_C-linearis_contig8.15704.1 vs. uniprot
Match: D5A9Q1_PICSI (Pre-mRNA-processing factor 19 n=2 Tax=Picea sitchensis TaxID=3332 RepID=D5A9Q1_PICSI)

HSP 1 Score: 345 bits (884), Expect = 9.410e-110
Identity = 190/399 (47.62%), Postives = 239/399 (59.90%), Query Frame = 0
Query:    1 MQCAISGQTPETPVVSKKSGHVYEKRLIIKYIDAEGKCPATGEELTADDLLELHSDKAAKPRPVEAASIPGLLAVMQNEWDDLMLETHTLKQHLDQTRQELSQALYQNDAACRVIARLVRERDEARAXXXXXXXXXXXXXXXXXXXXXXXXXEMETEVDGEE-----------GISAAVHTQMQAKWKELSKKRKKRAMPDDLASPETVSAWGEVSSNTLHKTSPKGITCLDLHPSKPNLLLTGGVDKTAIVFDRDTQAQVATLSGHTKRVTDACFHPTRELLLTASVDKTARVWQAEEDGGGYKVAHVLDDHDGEVVGATXXXXXXXXXXXXKDKSWAFYDISRGRLLRHVKNDEYESGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGH 388
            M CAISG TPE PVVSK+SG ++EKRL+ K+I   G CP TGE L+ DDL+ + + KA KPRP++AASIPG+L + QNEWD +ML  + L+Q L   RQELS ALYQ+DAACRVIARL +ERDEARA                           + +++ ++           GI+  +  ++      LS +RKKR +   LA  E +  + ++SS+ LHKT+  GI C D+HPSK  L+ TGG D  A+VFDR     ++TLSGHTKRVT   F    +LLLT S DKT R+WQA EDG  Y   HVL DH  EV   T             DK+W FYD+S G  L  V +   E GY    FHPDGLILGTGT ++LVRIWD+K  ANVA F GH
Sbjct:    1 MFCAISGSTPEEPVVSKRSGLLFEKRLVEKHIAEYGTCPVTGESLSTDDLVPVKTPKAVKPRPLQAASIPGMLGLFQNEWDAVMLSNYALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARALLAQADRQIPMLPSNLAAVNASAVSNGKRDLERDDELPPPSKRIRQGITPEIIKELTDCNAMLSSQRKKRQISSTLAPVEALERYTQLSSHPLHKTNKPGILCADIHPSK-GLISTGGADANAVVFDRSAGQIISTLSGHTKRVTSVKFVARDDLLLTGSADKTVRIWQANEDGA-YNCRHVLKDHTAEVHAVTVHATNNYFVTASMDKTWCFYDLSSGLCLTQVNDPGIEDGYTSAAFHPDGLILGTGTTESLVRIWDVKTQANVAKFDGH 397          
BLAST of mRNA_C-linearis_contig8.15704.1 vs. uniprot
Match: B6TRQ7_MAIZE (Pre-mRNA-processing factor 19 n=13 Tax=Panicoideae TaxID=147369 RepID=B6TRQ7_MAIZE)

HSP 1 Score: 343 bits (881), Expect = 2.890e-109
Identity = 204/513 (39.77%), Postives = 272/513 (53.02%), Query Frame = 0
Query:    1 MQCAISGQTPETPVVSKKSGHVYEKRLIIKYIDAEGKCPATGEELTADDLLELHSDKAAKPRPVEAASIPGLLAVMQNEWDDLMLETHTLKQHLDQTRQELSQALYQNDAACRVIARLVRERDEARAXXXXXXXXXXXXXXXXXXXXXXXXXE--METEV--DGEE---GISAAVHTQMQAKWKELSKKRKKRAMPDDLASPETVSAWGEVSSNTLHKTSPKGITCLDLHPSKPNLLLTGGVDKTAIVFDRDTQAQVATLSGHTKRVTDACFHPTRELLLTASVDKTARVWQAEEDGGGYKVAHVLDDHDGEVVGATXXXXXXXXXXXXKDKSWAFYDISRGRLLRHVKNDEYESGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKKCTKVFAVKT----WGELASYDGYGGA--VTGVKFGKSASFLATSSMDRTVRFFG 500
            M CAISG+ P+ PVVSKKSG ++E+RLI +YI+  GKCP T +ELT DD++ ++++K  KPRP++AASIPGLL + QNEWD LML    L+Q L   RQELS ALYQ+DAACRVIARL +ERDEARA                         +  ME E+  DG++   GI+  +  ++      LS +RKKR +P  LA  + +  + ++SS+ LHKT+  GI  +D+HPSK +++ TGG+D  A++FDR +   + TL+GH+K++T   F P  +L +T S DKT R+WQ E + G Y   H L DH  EV   T            KD SW FYDIS G  L  V     + GY    FHPDGLILGTGT DA+V+IWD+K  +NVA F+GH                                                             G    +V+ V      W  + +     G   VT VKFG  A ++A  SMDR +R FG
Sbjct:    1 MICAISGEVPDEPVVSKKSGLLFERRLIERYIEDHGKCPITKDELTMDDIVPVNTNKVVKPRPLQAASIPGLLGIFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARALLAQAERQIPASVAGAAPAAVVSNGKRAMEDEIGPDGKKIRPGINPVMIDELTECNTMLSAQRKKRQVPPTLAPLDALERYTQISSHPLHKTNKPGILSMDVHPSK-DVVATGGIDTNAVIFDRSSGQILCTLTGHSKKITTLKFVPRDQLFVTGSADKTVRIWQ-ENENGNYNCVHTLKDHTAEVEAVTVHATQKYFVSASKDNSWCFYDISTGSCLTQVGEASGQEGYTSASFHPDGLILGTGTTDAVVKIWDVKTQSNVAKFEGHVGPVTAMSFSENGYFLATAAHDGVKLWDLRKLRNFRTFSPYDSDTPTNTVEFDFSGNYLAIGGSDIRVYQVANVKAEWNLIKTLPDLSGTGKVTSVKFGADAKYIAVGSMDRNLRIFG 511          
BLAST of mRNA_C-linearis_contig8.15704.1 vs. uniprot
Match: A0A1Y1Z4H6_9FUNG (Pre-mRNA-processing factor 19 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z4H6_9FUNG)

HSP 1 Score: 343 bits (879), Expect = 3.080e-109
Identity = 228/504 (45.24%), Postives = 286/504 (56.75%), Query Frame = 0
Query:    1 MQCAISGQTPETPVVSKKSGHVYEKRLIIKYI-DAEGKCPATGEELTADDLLELHS-DKAAKPRPVEAASIPGLLAVMQNEWDDLMLETHTLKQHLDQTRQELSQALYQNDAACRVIARLVRERDEARAXXXXXXXXXXXXXXXXXXXXXXXXXEMETEVDGEEGISAAVHTQMQAKWKELSKKRKKRAMPDDLASPETVSAWGEVSS-NTLHKTSPKGITCLDLHPSKPNLLLTGGVDKTAIVFDRDTQAQVATLSGHTKRVTDACFHPTRE-LLLTASVDKTARVWQAEEDGGGYKVAHVLDDHDGEVVGATXXXXXXXXXXXXKDKSWAFYDISRGRLLRHVKNDEYESGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKKCTKVFAVKTWGELASYDGYGGAVTGVKFGKSASFLATSSMDRTVRFFG 500
            M CAISG+ PE PVVS KSGHV+EKRLIIKY+ + + KCP TGEELT  DL+E+ S  K  KPR     SIP +LA  QNEWD LMLET+TLKQ   Q RQELS ALYQ DAACRVIAR+ +ERD AR                           M+T+   EEG++ AV  ++    + LSK RKKR  P +L S + V ++ + S    LH ++  GITCLDL  +   L+LTGG DK A ++ +D +  VA L GHTKR+TD  F      + LT+S DKT +VW+ E  G GY   + +D H+ EV   T            +D +WAF+D+  GR L  V   + ++GY+C +FHPDGLILGTGT D+ VRIWD+K  +NVA F GH           XXXXXXXXXXXXXXXXXXXX                              G    +VF VK W ELA        V  + FG+ A FL +  MDR++R+FG
Sbjct:    1 MFCAISGEAPEVPVVSSKSGHVFEKRLIIKYLAENDNKCPITGEELTEQDLVEVKSVPKMVKPRTPTMTSIPSMLASFQNEWDSLMLETYTLKQQYQQVRQELSHALYQQDAACRVIARVTKERDAAREALVNLRAHLDSHAQTAPDNGDVN---MDTQ---EEGLTNAVIEKLTQTSQALSKTRKKRKAPAELTSVDAVRSYTQTSVVPALHSSTAPGITCLDLDATN-KLVLTGGHDKIAQIYKQDEEKTVAELKGHTKRITDVLFQGAESGVALTSSADKTVKVWKPE--GSGYACVNTIDAHESEVTSITLHPSKEFLVSSSQDSTWAFHDLGTGRTLSKVSTADVQTGYSCAQFHPDGLILGTGTNDSAVRIWDVKSQSNVATFAGHTGRVTSLSFSEXXXXXXXXXXXXXXXXXXXXKLVNFKTLELPQNNKVNVVNFDYSGQYLAVGGTDVRVFKVKEWDELAVLSDNTAEVNDLSFGEYARFLVSGGMDRSLRYFG 495          
BLAST of mRNA_C-linearis_contig8.15704.1 vs. uniprot
Match: A0A2R6W4B2_MARPO (Pre-mRNA-processing factor 19 n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W4B2_MARPO)

HSP 1 Score: 343 bits (880), Expect = 3.960e-109
Identity = 208/517 (40.23%), Postives = 271/517 (52.42%), Query Frame = 0
Query:    1 MQCAISGQTPETPVVSKKSGHVYEKRLIIKYIDAEGKCPATGEELTADDLLELHSDKAAKPRPVEAASIPGLLAVMQNEWDDLMLETHTLKQHLDQTRQELSQALYQNDAACRVIARLVRERDEAR-----AXXXXXXXXXXXXXXXXXXXXXXXXXEMETEVDGE---EGISAAVHTQMQAKWKELSKKRKKRAMPDDLASPETVSAWGEVSSNTLHKTSPKGITCLDLHPSKPNLLLTGGVDKTAIVFDRDTQAQVATLSGHTKRVTDACFHPTRELLLTASVDKTARVWQAEEDGGGYKVAHVLDDHDGEVVGATXXXXXXXXXXXXKDKSWAFYDISRGRLLRHVKNDEYESGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKKCTKVFAVKT----WGELASYDGYGGA--VTGVKFGKSASFLATSSMDRTVRFFGTAT 503
            M CAISG TPE PVVS+++G +YE+RLI K++   G CP TGE L ADDL+ + ++KA KPRP++AASIPG+L + QNEWD LML  + L+Q L   RQELS ALYQ+DAACRVIARL +ERDEAR     A                         E E    G+   +GI+  +  ++      LS +RKKR     LA+ E    + +V+S+ LHKT   GI   D+HP+K + +LTGGVD TAIVF++ +   V+TL+GH+KRVT   F P  EL+LT S DKT R+WQ +EDG  Y   HVL DH  EV   T             DK+W FYD+S G  L  V     + G+    FHPDGLILGTGT ++LVRIWD+K  ANVA F+GH                                                             G    +++ V +    W  +  +    G   VT V+FG  AS+LA ++MDR +R  G  T
Sbjct:    1 MFCAISGVTPEEPVVSRRTGLLYERRLIEKHLAENGTCPVTGESLPADDLISVKTNKAVKPRPLQAASIPGMLGLFQNEWDALMLSNYALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARQRLVQAARQVPSTELATPTAASANGKRAPEAEAEPAAPGKKARQGITPEIIKELTDCNARLSGQRKKRQNSQTLATAEAFEKYTQVASHPLHKTVKPGICSTDIHPTK-DFILTGGVDSTAIVFNKASGEIVSTLAGHSKRVTSVKFVPRDELVLTGSADKTVRIWQGQEDGS-YNCKHVLKDHSAEVRAVTLHATHNYFVTASLDKTWGFYDLSTGLCLTQVNEATVQDGFTSAAFHPDGLILGTGTAESLVRIWDVKTQANVAKFEGHTGPVTDISFSENGYFLATAASDGVKLWDLRKLKNFRSFAPYDAATPTNTVEFDYSGSYLAVGGSDIRIYQVASVKQEWNTVKVFPDLSGTGKVTSVRFGPDASYLAVATMDRQLRILGAPT 515          
BLAST of mRNA_C-linearis_contig8.15704.1 vs. uniprot
Match: A0A200PVU9_9MAGN (Pre-mRNA-processing factor 19 n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200PVU9_9MAGN)

HSP 1 Score: 343 bits (879), Expect = 5.270e-109
Identity = 190/398 (47.74%), Postives = 239/398 (60.05%), Query Frame = 0
Query:    1 MQCAISGQTPETPVVSKKSGHVYEKRLIIKYIDAEGKCPATGEELTADDLLELHSDKAAKPRPVEAASIPGLLAVMQNEWDDLMLETHTLKQHLDQTRQELSQALYQNDAACRVIARLVRERDEARAXXXXXXXXXXXXXXXXXXXXXXXXXEMETEVDGEE----------GISAAVHTQMQAKWKELSKKRKKRAMPDDLASPETVSAWGEVSSNTLHKTSPKGITCLDLHPSKPNLLLTGGVDKTAIVFDRDTQAQVATLSGHTKRVTDACFHPTRELLLTASVDKTARVWQAEEDGGGYKVAHVLDDHDGEVVGATXXXXXXXXXXXXKDKSWAFYDISRGRLLRHVKNDEYESGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGH 388
            M CAISG+ PE PV+SKKSG ++EKRL+ ++++  GKCP TGE LT DDL+ + ++K  KPRP++AASIPGLL + Q EWD LML    L+Q L   RQELS ALYQ+DAACRVIARL  ERDEAR                            +   + EE          GISA + T++      LS++RKKR +P  LA  E++  + ++SS+ LHKTS  GI  +D+HPSK +++ TGGVD  AIVFDR +   ++TLSGH+KRVT   F P  E  +T S DKT RVWQ  EDG  Y   H+L DH  EV   T             D +W FYD+S G  L  V +     GY    FHPDGLILGTGT +ALVRIWD+K  +NVA F GH
Sbjct:    1 MICAISGEVPEEPVISKKSGLLFEKRLVERHVEDYGKCPVTGEALTMDDLISVKTNKTVKPRPLQAASIPGLLGMFQIEWDQLMLSHFALEQQLHTARQELSHALYQHDAACRVIARLKNERDEARTLLTQTERHVPMPASTAVAANDSTFSNGKRAAEDEELGSGGKKIRPGISANIITELTDCNAILSQQRKKRQIPPTLAPVESLEKYTQLSSHPLHKTSKPGILSVDIHPSK-DIIATGGVDTNAIVFDRTSGQIISTLSGHSKRVTSVKFVPQDEFFVTGSADKTVRVWQGSEDGN-YNCRHILKDHSAEVQAVTVHATNNYFVTASLDNTWCFYDLSSGLCLTQVGDASGGDGYTSAAFHPDGLILGTGTLEALVRIWDVKSQSNVAKFDGH 396          
BLAST of mRNA_C-linearis_contig8.15704.1 vs. uniprot
Match: A0A833V7Z2_9POAL (Pre-mRNA-processing factor 19 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833V7Z2_9POAL)

HSP 1 Score: 341 bits (874), Expect = 2.710e-108
Identity = 201/509 (39.49%), Postives = 270/509 (53.05%), Query Frame = 0
Query:    1 MQCAISGQTPETPVVSKKSGHVYEKRLIIKYIDAEGKCPATGEELTADDLLELHSDKAAKPRPVEAASIPGLLAVMQNEWDDLMLETHTLKQHLDQTRQELSQALYQNDAACRVIARLVRERDEARAXXXXXXXXXXXXXXXXXXXXXXXXXEMETEVDGEE---GISAAVHTQMQAKWKELSKKRKKRAMPDDLASPETVSAWGEVSSNTLHKTSPKGITCLDLHPSKPNLLLTGGVDKTAIVFDRDTQAQVATLSGHTKRVTDACFHPTRELLLTASVDKTARVWQAEEDGGGYKVAHVLDDHDGEVVGATXXXXXXXXXXXXKDKSWAFYDISRGRLLRHVKNDEYESGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKKCTKVFAVKT----WGELASYDGYGGA--VTGVKFGKSASFLATSSMDRTVRFFG 500
            M CAISG+ PE PVVSKKSGH++E+RLI +YI   G+CP T EEL+ DD+L + ++K  KPRP++AASIPGLL + QNEWD LML   +L+Q L   RQELS ALYQ+DAACRVIARL +ERDEAR                          E E   DG+    GI +A   ++    K LS +RK+R +P  LA  + + ++ ++SS+ LHKT+  GI  +D+HPSK +++ TGGVD  A++F+R +   ++TL+GH+K++T   F    EL++T S DKT R+WQ  +DG  Y  AH+L DH  EV   T             D +W FYD+  G  L+ V     E GY    FHPDGLILGTGT ++LV+IWD+K  A V NF+GH                                                                  +V+ V      W  + ++    G   VT VKFG  A ++A  SMDR +R FG
Sbjct:    1 MICAISGEVPEDPVVSKKSGHLFERRLIERYIQDHGRCPVTKEELSMDDILPVKTNKTVKPRPLQAASIPGLLGMFQNEWDALMLSNLSLEQQLHTARQELSHALYQHDAACRVIARLKKERDEARLLLSQAERQLPAATAPALSNGKRVA-EDEVGPDGKRIRPGIDSATVDELAEYNKMLSAQRKQREIPATLAPIDALESYTQISSHPLHKTNKPGILSIDIHPSK-DIIATGGVDTNAVIFNRASGQILSTLTGHSKKITSVKFVGRDELVITGSADKTVRLWQGTDDGT-YNCAHILKDHTAEVQAVTVQATKKYFVSAGMDNTWCFYDLPTGSCLKQVGEPSQEGGYTTAAFHPDGLILGTGTSESLVKIWDIKTQAFVTNFEGHSGPVTAMSFSENGYFLATAASDGVRLWDLRKLRNFRTFSPYDVNTPTNSVEFDFSGSYLAIAGSDIRVYQVANVKLEWNLIKTFPDLSGTGKVTSVKFGADAKYMAVGSMDRNLRIFG 506          
BLAST of mRNA_C-linearis_contig8.15704.1 vs. uniprot
Match: A0A4Y7L8Z3_PAPSO (Pre-mRNA-processing factor 19 n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7L8Z3_PAPSO)

HSP 1 Score: 340 bits (871), Expect = 7.610e-108
Identity = 208/518 (40.15%), Postives = 270/518 (52.12%), Query Frame = 0
Query:    1 MQCAISGQTPETPVVSKKSGHVYEKRLIIKYIDAEGKCPATGEELTADDLLELHSDKAAKPRPVEAASIPGLLAVMQNEWDDLMLETHTLKQHLDQTRQELSQALYQNDAACRVIARLVRERDEAR-----AXXXXXXXXXXXXXXXXXXXXXXXXXEMETEVDGEE---GISAAVHTQMQAKWKELSKKRKKRAMPDDLASPETVSAWGEVSSNTLHKTSPKGITCLDLHPSKPNLLLTGGVDKTAIVFDRDTQAQVATLSGHTKRVTDACFHPTRELLLTASVDKTARVWQAEEDGGGYKVAHVLDDHDGEVVGATXXXXXXXXXXXXKDKSWAFYDISRGRLLRHVKNDEYESGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKKCTKVF----------AVKTWGELASYDGYGGAVTGVKFGKSASFLATSSMDRTVRFFG 500
            M CAISG+ PE PVVSKK+GH++EKRL+ ++++  GKCP TGE LT DDL+ + ++KA KPRP++AASIPGLL + Q EWD LML    L+Q L   RQELS ALYQ+DAACRVIARL +ERDEAR     A                         ++  + DG+    GISA +   +      LS++RKKR +P  LA  + +  + ++SS+ LHKT+  GI  +D+HPSK +++ TGGVD  AIVFDR +   ++TLSGH+K+VT   F P  +  +TAS DKT RVWQ  EDG  Y   HVL DH  EV   T             D +W FYD++ G  L  V +     GY    FHPDGLILGTGT  A VRIWD+K  +NVA F+GH                                                                  +V+           VKT+ +L+      G  T VKFG +A +L   SMDR +R FG
Sbjct:    1 MICAISGEVPEEPVVSKKTGHLFEKRLVERHVEDFGKCPVTGEPLTMDDLMPVKTNKAVKPRPLQAASIPGLLGMFQIEWDQLMLSHFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARTLLTLAERHVPLPASTTANDSTFNNGKRAAEDVNMDHDGKRSLPGISADIIADLTDCNTLLSQQRKKRQIPSTLAPVDALERYTQLSSHPLHKTNRPGILSVDIHPSK-DIIATGGVDTNAIVFDRTSGQILSTLSGHSKKVTSVKFVPKDDFFVTASADKTVRVWQGSEDGN-YNCRHVLKDHIAEVQAVTVHATNNYFVSASLDSTWCFYDLTSGSCLTQVGDTSDGDGYTSAAFHPDGLILGTGTSQANVRIWDVKSQSNVAKFEGHSGPVSAISFSENGYFLATAADDGVKLWDLRKLRNFRTFAPYDSNTSTNSVDFDHSGSYLAIAGSDIRVYQVANVKSEWNCVKTFPDLSGT----GKATSVKFGPNAQYLTVGSMDRNLRIFG 512          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15704.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEL3_9PHAE1.630e-24686.90Pre-mRNA-processing factor 19 n=2 Tax=Ectocarpus T... [more]
A0A6V1T7M8_HETAK1.300e-13749.70Pre-mRNA-processing factor 19 n=1 Tax=Heterosigma ... [more]
A0A835YI40_9STRA1.040e-13250.30Pre-mRNA-processing factor 19 n=1 Tax=Tribonema mi... [more]
D5A9Q1_PICSI9.410e-11047.62Pre-mRNA-processing factor 19 n=2 Tax=Picea sitche... [more]
B6TRQ7_MAIZE2.890e-10939.77Pre-mRNA-processing factor 19 n=13 Tax=Panicoideae... [more]
A0A1Y1Z4H6_9FUNG3.080e-10945.24Pre-mRNA-processing factor 19 n=1 Tax=Basidiobolus... [more]
A0A2R6W4B2_MARPO3.960e-10940.23Pre-mRNA-processing factor 19 n=1 Tax=Marchantia p... [more]
A0A200PVU9_9MAGN5.270e-10947.74Pre-mRNA-processing factor 19 n=1 Tax=Macleaya cor... [more]
A0A833V7Z2_9POAL2.710e-10839.49Pre-mRNA-processing factor 19 n=1 Tax=Carex little... [more]
A0A4Y7L8Z3_PAPSO7.610e-10840.15Pre-mRNA-processing factor 19 n=2 Tax=Papaver somn... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 115..142
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 1..53
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 362..376
score: 32.91
coord: 404..418
score: 37.64
coord: 272..286
score: 34.77
IPR003613U box domainSMARTSM00504Ubox_2coord: 1..66
e-value: 2.6E-13
score: 60.2
IPR003613U box domainPROSITEPS51698U_BOXcoord: 1..70
score: 25.407
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 420..458
e-value: 190.0
score: 2.7
coord: 292..331
e-value: 0.0044
score: 26.2
coord: 206..243
e-value: 0.0049
score: 26.1
coord: 246..285
e-value: 9.9E-10
score: 48.3
coord: 378..417
e-value: 2.2E-9
score: 47.2
coord: 461..500
e-value: 0.0039
score: 26.4
coord: 334..375
e-value: 0.0069
score: 25.6
IPR001680WD40 repeatPFAMPF00400WD40coord: 210..243
e-value: 0.12
score: 13.3
coord: 351..375
e-value: 0.091
score: 13.7
coord: 381..417
e-value: 8.6E-7
score: 29.6
coord: 249..284
e-value: 4.7E-6
score: 27.2
coord: 465..498
e-value: 0.0026
score: 18.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 385..419
score: 15.655
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 299..340
score: 8.503
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 468..503
score: 9.706
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 253..285
score: 13.148
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 343..384
score: 11.812
IPR013915Pre-mRNA-splicing factor 19PFAMPF08606Prp19coord: 66..130
e-value: 5.8E-34
score: 115.9
IPR004181Zinc finger, MIZ-typePFAMPF11789zf-Nsecoord: 1..42
e-value: 7.9E-7
score: 28.8
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..56
e-value: 3.7E-20
score: 73.2
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 189..501
e-value: 5.0E-93
score: 313.3
IPR038959Pre-mRNA-processing factor 19PANTHERPTHR43995FAMILY NOT NAMEDcoord: 1..501
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 362..376
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 404..418
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 210..503
score: 44.636
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 214..499

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:2708563..2718168 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15704.1mRNA_C-linearis_contig8.15704.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 2706817..2718269 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15704.1 ID=prot_C-linearis_contig8.15704.1|Name=mRNA_C-linearis_contig8.15704.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=504bp
MQCAISGQTPETPVVSKKSGHVYEKRLIIKYIDAEGKCPATGEELTADDL
LELHSDKAAKPRPVEAASIPGLLAVMQNEWDDLMLETHTLKQHLDQTRQE
LSQALYQNDAACRVIARLVRERDEARAQMQTQRTALAQAQAAAPAAAAAA
VEEMETEVDGEEGISAAVHTQMQAKWKELSKKRKKRAMPDDLASPETVSA
WGEVSSNTLHKTSPKGITCLDLHPSKPNLLLTGGVDKTAIVFDRDTQAQV
ATLSGHTKRVTDACFHPTRELLLTASVDKTARVWQAEEDGGGYKVAHVLD
DHDGEVVGATVHATGDFMATASKDKSWAFYDISRGRLLRHVKNDEYESGY
NCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHEGGVNALAFSEN
GYYMASAGEDGYARLWDLRKLTNFDNLTIGDGAASSVAFDFSGSYLAAGG
KKCTKVFAVKTWGELASYDGYGGAVTGVKFGKSASFLATSSMDRTVRFFG
TAT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR003613Ubox_domain
IPR001680WD40_repeat
IPR013915Pre-mRNA_splic_Prp19
IPR004181Znf_MIZ
IPR013083Znf_RING/FYVE/PHD
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR038959Prp19
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf