mRNA_C-linearis_contig8.15704.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig8.15704.1
Unique NamemRNA_C-linearis_contig8.15704.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig8.15704.1 vs. uniprot
Match: A0A6H5JEL3_9PHAE (Pre-mRNA-processing factor 19 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEL3_9PHAE)

HSP 1 Score: 693 bits (1788), Expect = 5.520e-245
Identity = 438/504 (86.90%), Postives = 459/504 (91.07%), Query Frame = 1 
Query:  238 MQCAISGQTPETPVVSKKSGHVYEKRLIIKYIDAEGKCPATGEELTADDLLELHSDKAAKPRPVEAASIPGLLAVMQNEWDDLMLETHTLKQHLDQTRQELSQALYQNDAACRVIARLVRERDEARAXXXXXXXXXXXXXXXXXXXXXXXXXEMETEVDGEEGISAAVHTQMQAKWKELSKKRKKRAMPDDLASPETVSAWGEVSSNTLHKTSPKGITCLDLHPSKPNLLLTGGVDKTAIVFDRDTQAQVATLSGHTKRVTDACFHPTRELLLTASVDKTARVWQA--EEDGGGYKVAHVLDDHDGEVVGATXXXXXXXXXXXXKDKSWAFYDISRGRLLRHVKNDEYESGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKKCTKVFAVKTWGELASYDGYGGAVTGVKFGKSASFLATSSMDRTVRFFGTA 1743
            MQCAISGQTPETPVVSKKSGH+YEKRLI+KYIDAEGKCPATGEELTADDLL++ S+ A KPRP EAASIPGLL+ +QNEWDDLMLET+TLKQHL+QTRQELSQ+LYQNDAACRVIARL RERDEA A    XXXXXXXXXXXXXXXXXX   EM+TE DGEEGIS +VH QMQAKWKELSKKRKKRAMPDDLAS ETVSAWGEVS NTLHKTSPKGITCLDLHPSKPNL+LTGGVDKTAIVFDRDTQAQVATLSGHTKR+TDACFHPTRELLLT+S DKTARVWQA  E DGGGYK  HVLDDHDGEVVGAT            KDKSWAFYDI+RGRLL+HVKNDEY  GYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGH   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKK TKVFAVKTWGELA+Y  YGG+VTGVKFGKSASFLATSSMDRT+RF+GTA
Sbjct:    1 MQCAISGQTPETPVVSKKSGHIYEKRLIVKYIDAEGKCPATGEELTADDLLDVRSEGAVKPRPAEAASIPGLLSFLQNEWDDLMLETYTLKQHLNQTRQELSQSLYQNDAACRVIARLHRERDEALAQVQAXXXXXXXXXXXXXXXXXXVE-EMQTEDDGEEGISPSVHAQMQAKWKELSKKRKKRAMPDDLASQETVSAWGEVSRNTLHKTSPKGITCLDLHPSKPNLVLTGGVDKTAIVFDRDTQAQVATLSGHTKRITDACFHPTRELLLTSSADKTARVWQAQAEGDGGGYKAVHVLDDHDGEVVGATVHATGDFMATASKDKSWAFYDINRGRLLKHVKNDEYSEGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHEGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKKRTKVFAVKTWGELATYGDYGGSVTGVKFGKSASFLATSSMDRTLRFYGTA 503
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BLAST of mRNA_C-linearis_contig8.15704.1 vs. uniprot
Match: A0A6V1T7M8_HETAK (Pre-mRNA-processing factor 19 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T7M8_HETAK)

HSP 1 Score: 416 bits (1070), Expect = 2.640e-136
Identity = 252/507 (49.70%), Postives = 325/507 (64.10%), Query Frame = 1 
Query:  238 MQCAISGQTPETPVVSKKSGHVYEKRLIIKYIDAEGKCPATGEELTADDLLELHSDKAAKPRPVEAASIPGLLAVMQNEWDDLMLETHTLKQHLDQTRQELSQALYQNDAACRVIARLVRERDEARAXXXXXXXXXXXXXXXXXXXXXXXXXEMETEVDG-EEGISAAVHTQMQAKWKELSKKRKKRAMPDDLASPETVSAWGEVSSNTLHKTSPKGITCLDLHPSKPNLLLTGGVDKTAIVFDRDTQAQVATLSGHTKRVTDACFHP--TRELLLTASVDKTARVWQAEEDGGGYKVAHVLDDHDGEVVGATXXXXXXXXXXXXKDKSWAFYDISRG---RLLRHVKNDEYESGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GKKCTKVFAVKTWGELASYDGYGGAVTGVKFGKSASFLATSSMDRTVRFF 1734
            M C+ISG+ P+ PV+S KSGH++EK LI KY+ +E  CP TG+EL+ +DL ++  +KA KPRP+ A SIPGLL + QNEWDDLMLETHTLK HLD TRQ+LSQALYQ+DAACRVIARL+RERDE +                           +E + +  EEGIS AV ++M  KWK+LSK+RKKR +PD LAS ET+S W   +S+T+HK+   GI CLDLHP+  +++LTGG+DK A++F++ ++  VA LSGH K+VT   FHP   R LL T S DKTA++W +   G  Y+    L DH  EVVGA+            KD++WAFYD+++G     L+ V++     G+ CV FHPDGLILGTGT DAL+RIWDMK   NVA+F+GH      XXXXXXXXXXXXXXXXXXXXXXXXX                                G    +++AVK W ELA+   +   VTGV+FG  A FLA++SMDR+++ F
Sbjct:    1 MHCSISGEVPKVPVISVKSGHLFEKHLIEKYLKSESTCPVTGDELSIEDLKDVKVNKAVKPRPLTATSIPGLLNLFQNEWDDLMLETHTLKSHLDSTRQQLSQALYQHDAACRVIARLIRERDELKTQLTMYKQQIAEAAAATPQIEVTSAPSLEVQEEKQEEGISDAVLSKMTRKWKQLSKERKKRGIPDSLASAETLSKWAAKASHTVHKSDKPGILCLDLHPTDQDMVLTGGMDKEAVLFNKTSEQVVAKLSGHGKKVTTCSFHPHADRNLLFTTSADKTAKIWGSS--GDAYECRMTLADHTAEVVGASVHATGDFLATASKDRTWAFYDVAQGGAATCLKIVQDPTVAGGFECVSFHPDGLILGTGTSDALIRIWDMKTQTNVASFEGHTGAVHAXXXXXXXXXXXXXXXXXXXXXXXXXRLKNFHNLDAGGTGGVGVRTVAFDRAGAYLACGGADIRLYAVKEWNELAALGAHEKPVTGVRFGPDAGFLASTSMDRSLKIF 505
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BLAST of mRNA_C-linearis_contig8.15704.1 vs. uniprot
Match: A0A835YI40_9STRA (Pre-mRNA-processing factor 19 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI40_9STRA)

HSP 1 Score: 404 bits (1037), Expect = 2.030e-131
Identity = 255/507 (50.30%), Postives = 308/507 (60.75%), Query Frame = 1 
Query:  238 MQCAISGQTPETPVVSKKSGHVYEKRLIIKYIDAEGKCPATGEELTADDLLELHSDKAAKPRPVEAASIPGLLAVMQNEWDDLMLETHTLKQHLDQTRQELSQALYQNDAACRVIARLVRERDEARAXXXXXXXXXXXXXXXXXXXXXXXXXEMETEV--DGEEGISAAVHTQMQAKWKELSKKRKKRAMPDDLASPETVSAWGEVSSNTLHKTSPKGITCLDLHPSKPNLLLTGGVDKTAIVFDRDTQAQVATLSGHTKRVTDACFHPTRELLLTASVDKTARVWQAEEDGGGYKVAHVLDDHDGEVVGATXXXXXXXXXXXXKDKSWAFYDISRGRLLRHVKNDEYESGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKKCT---KVFAVKTWGELASYDGYGGAVTGVKFGKSASFLATSSMDRTVRFFGTA 1743
            M CAISG+ PE PVVS+K+GH++E+RLI KYIDAEGKCP TGE L  DDL+++ S+K  +PRP  A SIPGLLA+MQNEWDDLM+ET+TLKQHLD TRQELSQALYQ DA+ RVIARL+RERDEAR             XXXXXXXXXXXX E+E  V  D    I+  V +++   WK L+K RKKR +P DL S + ++ W E SS TLHKT+P GITCL L P   +L LTGGVDKTAI+F+R++  Q A LSGH+K+V D  F    E+LLTAS D TA+ W  E       + H    H GEV                +DK+W F+++  G  LR VK + +E+GY C R+HPDGLILGTGTGDA VRIWDMK   NVA+FKGH                  XXXXXXXXXXXXX                                      +V  VK W    +   +   +TGV F  SA  LA +SMDRT+RFF  A
Sbjct:    1 MNCAISGEVPEVPVVSRKTGHLFERRLIEKYIDAEGKCPITGEPLGVDDLMDVKSNKVVRPRPATATSIPGLLALMQNEWDDLMVETYTLKQHLDTTRQELSQALYQQDASARVIARLMRERDEARQQLQAQRAALAQAXXXXXXXXXXXXMEVEPAVVEDIPAKIADTVMSELTNTWKALTKSRKKRVIPVDLVSADDMANWVEASSQTLHKTTPAGITCLALSPQDASLTLTGGVDKTAILFNRESGVQSALLSGHSKKVLDVAFGKGGEVLLTASADGTAKSWDLEG-----MLLHTFQGHKGEVTAICGHPTGRYAATAGRDKAWGFHELESGSCLRLVKEEGFEAGYECARWHPDGLILGTGTGDAQVRIWDMKTQNNVASFKGHEGGVVGSIAFSENGYYMAXXXXXXXXXXXXXRKLKNFHTLTLGSAAGTPVVVTFDHSGTYLAVSANTTIQVHVVKEWALATTLGQFKKPITGVAFAPSAKSLAATSMDRTLRFFEAA 502
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BLAST of mRNA_C-linearis_contig8.15704.1 vs. uniprot
Match: D5A9Q1_PICSI (Pre-mRNA-processing factor 19 n=2 Tax=Picea sitchensis TaxID=3332 RepID=D5A9Q1_PICSI)

HSP 1 Score: 345 bits (885), Expect = 2.060e-108
Identity = 190/399 (47.62%), Postives = 239/399 (59.90%), Query Frame = 1 
Query:  238 MQCAISGQTPETPVVSKKSGHVYEKRLIIKYIDAEGKCPATGEELTADDLLELHSDKAAKPRPVEAASIPGLLAVMQNEWDDLMLETHTLKQHLDQTRQELSQALYQNDAACRVIARLVRERDEARAXXXXXXXXXXXXXXXXXXXXXXXXXEMETEVDGEE-----------GISAAVHTQMQAKWKELSKKRKKRAMPDDLASPETVSAWGEVSSNTLHKTSPKGITCLDLHPSKPNLLLTGGVDKTAIVFDRDTQAQVATLSGHTKRVTDACFHPTRELLLTASVDKTARVWQAEEDGGGYKVAHVLDDHDGEVVGATXXXXXXXXXXXXKDKSWAFYDISRGRLLRHVKNDEYESGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGH 1401
            M CAISG TPE PVVSK+SG ++EKRL+ K+I   G CP TGE L+ DDL+ + + KA KPRP++AASIPG+L + QNEWD +ML  + L+Q L   RQELS ALYQ+DAACRVIARL +ERDEARA                           + +++ ++           GI+  +  ++      LS +RKKR +   LA  E +  + ++SS+ LHKT+  GI C D+HPSK  L+ TGG D  A+VFDR     ++TLSGHTKRVT   F    +LLLT S DKT R+WQA EDG  Y   HVL DH  EV   T             DK+W FYD+S G  L  V +   E GY    FHPDGLILGTGT ++LVRIWD+K  ANVA F GH
Sbjct:    1 MFCAISGSTPEEPVVSKRSGLLFEKRLVEKHIAEYGTCPVTGESLSTDDLVPVKTPKAVKPRPLQAASIPGMLGLFQNEWDAVMLSNYALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARALLAQADRQIPMLPSNLAAVNASAVSNGKRDLERDDELPPPSKRIRQGITPEIIKELTDCNAMLSSQRKKRQISSTLAPVEALERYTQLSSHPLHKTNKPGILCADIHPSK-GLISTGGADANAVVFDRSAGQIISTLSGHTKRVTSVKFVARDDLLLTGSADKTVRIWQANEDGA-YNCRHVLKDHTAEVHAVTVHATNNYFVTASMDKTWCFYDLSSGLCLTQVNDPGIEDGYTSAAFHPDGLILGTGTTESLVRIWDVKTQANVAKFDGH 397
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BLAST of mRNA_C-linearis_contig8.15704.1 vs. uniprot
Match: B6TRQ7_MAIZE (Pre-mRNA-processing factor 19 n=13 Tax=Panicoideae TaxID=147369 RepID=B6TRQ7_MAIZE)

HSP 1 Score: 344 bits (883), Expect = 4.470e-108
Identity = 204/513 (39.77%), Postives = 272/513 (53.02%), Query Frame = 1 
Query:  238 MQCAISGQTPETPVVSKKSGHVYEKRLIIKYIDAEGKCPATGEELTADDLLELHSDKAAKPRPVEAASIPGLLAVMQNEWDDLMLETHTLKQHLDQTRQELSQALYQNDAACRVIARLVRERDEARAXXXXXXXXXXXXXXXXXXXXXXXXXE--METEV--DGEE---GISAAVHTQMQAKWKELSKKRKKRAMPDDLASPETVSAWGEVSSNTLHKTSPKGITCLDLHPSKPNLLLTGGVDKTAIVFDRDTQAQVATLSGHTKRVTDACFHPTRELLLTASVDKTARVWQAEEDGGGYKVAHVLDDHDGEVVGATXXXXXXXXXXXXKDKSWAFYDISRGRLLRHVKNDEYESGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKKCTKVFAVKT----WGELASYDGYGGA--VTGVKFGKSASFLATSSMDRTVRFFG 1737
            M CAISG+ P+ PVVSKKSG ++E+RLI +YI+  GKCP T +ELT DD++ ++++K  KPRP++AASIPGLL + QNEWD LML    L+Q L   RQELS ALYQ+DAACRVIARL +ERDEARA                         +  ME E+  DG++   GI+  +  ++      LS +RKKR +P  LA  + +  + ++SS+ LHKT+  GI  +D+HPSK +++ TGG+D  A++FDR +   + TL+GH+K++T   F P  +L +T S DKT R+WQ E + G Y   H L DH  EV   T            KD SW FYDIS G  L  V     + GY    FHPDGLILGTGT DA+V+IWD+K  +NVA F+GH                                                             G    +V+ V      W  + +     G   VT VKFG  A ++A  SMDR +R FG
Sbjct:    1 MICAISGEVPDEPVVSKKSGLLFERRLIERYIEDHGKCPITKDELTMDDIVPVNTNKVVKPRPLQAASIPGLLGIFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARALLAQAERQIPASVAGAAPAAVVSNGKRAMEDEIGPDGKKIRPGINPVMIDELTECNTMLSAQRKKRQVPPTLAPLDALERYTQISSHPLHKTNKPGILSMDVHPSK-DVVATGGIDTNAVIFDRSSGQILCTLTGHSKKITTLKFVPRDQLFVTGSADKTVRIWQ-ENENGNYNCVHTLKDHTAEVEAVTVHATQKYFVSASKDNSWCFYDISTGSCLTQVGEASGQEGYTSASFHPDGLILGTGTTDAVVKIWDVKTQSNVAKFEGHVGPVTAMSFSENGYFLATAAHDGVKLWDLRKLRNFRTFSPYDSDTPTNTVEFDFSGNYLAIGGSDIRVYQVANVKAEWNLIKTLPDLSGTGKVTSVKFGADAKYIAVGSMDRNLRIFG 511
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BLAST of mRNA_C-linearis_contig8.15704.1 vs. uniprot
Match: A0A1Y1Z4H6_9FUNG (Pre-mRNA-processing factor 19 n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Z4H6_9FUNG)

HSP 1 Score: 343 bits (881), Expect = 4.750e-108
Identity = 228/504 (45.24%), Postives = 286/504 (56.75%), Query Frame = 1 
Query:  238 MQCAISGQTPETPVVSKKSGHVYEKRLIIKYI-DAEGKCPATGEELTADDLLELHS-DKAAKPRPVEAASIPGLLAVMQNEWDDLMLETHTLKQHLDQTRQELSQALYQNDAACRVIARLVRERDEARAXXXXXXXXXXXXXXXXXXXXXXXXXEMETEVDGEEGISAAVHTQMQAKWKELSKKRKKRAMPDDLASPETVSAWGEVSS-NTLHKTSPKGITCLDLHPSKPNLLLTGGVDKTAIVFDRDTQAQVATLSGHTKRVTDACFHPTRE-LLLTASVDKTARVWQAEEDGGGYKVAHVLDDHDGEVVGATXXXXXXXXXXXXKDKSWAFYDISRGRLLRHVKNDEYESGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKKCTKVFAVKTWGELASYDGYGGAVTGVKFGKSASFLATSSMDRTVRFFG 1737
            M CAISG+ PE PVVS KSGHV+EKRLIIKY+ + + KCP TGEELT  DL+E+ S  K  KPR     SIP +LA  QNEWD LMLET+TLKQ   Q RQELS ALYQ DAACRVIAR+ +ERD AR                           M+T+   EEG++ AV  ++    + LSK RKKR  P +L S + V ++ + S    LH ++  GITCLDL  +   L+LTGG DK A ++ +D +  VA L GHTKR+TD  F      + LT+S DKT +VW+ E  G GY   + +D H+ EV   T            +D +WAF+D+  GR L  V   + ++GY+C +FHPDGLILGTGT D+ VRIWD+K  +NVA F GH           XXXXXXXXXXXXXXXXXXXX                              G    +VF VK W ELA        V  + FG+ A FL +  MDR++R+FG
Sbjct:    1 MFCAISGEAPEVPVVSSKSGHVFEKRLIIKYLAENDNKCPITGEELTEQDLVEVKSVPKMVKPRTPTMTSIPSMLASFQNEWDSLMLETYTLKQQYQQVRQELSHALYQQDAACRVIARVTKERDAAREALVNLRAHLDSHAQTAPDNGDVN---MDTQ---EEGLTNAVIEKLTQTSQALSKTRKKRKAPAELTSVDAVRSYTQTSVVPALHSSTAPGITCLDLDATN-KLVLTGGHDKIAQIYKQDEEKTVAELKGHTKRITDVLFQGAESGVALTSSADKTVKVWKPE--GSGYACVNTIDAHESEVTSITLHPSKEFLVSSSQDSTWAFHDLGTGRTLSKVSTADVQTGYSCAQFHPDGLILGTGTNDSAVRIWDVKSQSNVATFAGHTGRVTSLSFSEXXXXXXXXXXXXXXXXXXXXKLVNFKTLELPQNNKVNVVNFDYSGQYLAVGGTDVRVFKVKEWDELAVLSDNTAEVNDLSFGEYARFLVSGGMDRSLRYFG 495
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BLAST of mRNA_C-linearis_contig8.15704.1 vs. uniprot
Match: A0A2R6W4B2_MARPO (Pre-mRNA-processing factor 19 n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W4B2_MARPO)

HSP 1 Score: 344 bits (882), Expect = 6.120e-108
Identity = 208/517 (40.23%), Postives = 271/517 (52.42%), Query Frame = 1 
Query:  238 MQCAISGQTPETPVVSKKSGHVYEKRLIIKYIDAEGKCPATGEELTADDLLELHSDKAAKPRPVEAASIPGLLAVMQNEWDDLMLETHTLKQHLDQTRQELSQALYQNDAACRVIARLVRERDEAR-----AXXXXXXXXXXXXXXXXXXXXXXXXXEMETEVDGE---EGISAAVHTQMQAKWKELSKKRKKRAMPDDLASPETVSAWGEVSSNTLHKTSPKGITCLDLHPSKPNLLLTGGVDKTAIVFDRDTQAQVATLSGHTKRVTDACFHPTRELLLTASVDKTARVWQAEEDGGGYKVAHVLDDHDGEVVGATXXXXXXXXXXXXKDKSWAFYDISRGRLLRHVKNDEYESGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKKCTKVFAVKT----WGELASYDGYGGA--VTGVKFGKSASFLATSSMDRTVRFFGTAT 1746
            M CAISG TPE PVVS+++G +YE+RLI K++   G CP TGE L ADDL+ + ++KA KPRP++AASIPG+L + QNEWD LML  + L+Q L   RQELS ALYQ+DAACRVIARL +ERDEAR     A                         E E    G+   +GI+  +  ++      LS +RKKR     LA+ E    + +V+S+ LHKT   GI   D+HP+K + +LTGGVD TAIVF++ +   V+TL+GH+KRVT   F P  EL+LT S DKT R+WQ +EDG  Y   HVL DH  EV   T             DK+W FYD+S G  L  V     + G+    FHPDGLILGTGT ++LVRIWD+K  ANVA F+GH                                                             G    +++ V +    W  +  +    G   VT V+FG  AS+LA ++MDR +R  G  T
Sbjct:    1 MFCAISGVTPEEPVVSRRTGLLYERRLIEKHLAENGTCPVTGESLPADDLISVKTNKAVKPRPLQAASIPGMLGLFQNEWDALMLSNYALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARQRLVQAARQVPSTELATPTAASANGKRAPEAEAEPAAPGKKARQGITPEIIKELTDCNARLSGQRKKRQNSQTLATAEAFEKYTQVASHPLHKTVKPGICSTDIHPTK-DFILTGGVDSTAIVFNKASGEIVSTLAGHSKRVTSVKFVPRDELVLTGSADKTVRIWQGQEDGS-YNCKHVLKDHSAEVRAVTLHATHNYFVTASLDKTWGFYDLSTGLCLTQVNEATVQDGFTSAAFHPDGLILGTGTAESLVRIWDVKTQANVAKFEGHTGPVTDISFSENGYFLATAASDGVKLWDLRKLKNFRSFAPYDAATPTNTVEFDYSGSYLAVGGSDIRIYQVASVKQEWNTVKVFPDLSGTGKVTSVRFGPDASYLAVATMDRQLRILGAPT 515
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BLAST of mRNA_C-linearis_contig8.15704.1 vs. uniprot
Match: A0A200PVU9_9MAGN (Pre-mRNA-processing factor 19 n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200PVU9_9MAGN)

HSP 1 Score: 343 bits (880), Expect = 1.150e-107
Identity = 190/398 (47.74%), Postives = 239/398 (60.05%), Query Frame = 1 
Query:  238 MQCAISGQTPETPVVSKKSGHVYEKRLIIKYIDAEGKCPATGEELTADDLLELHSDKAAKPRPVEAASIPGLLAVMQNEWDDLMLETHTLKQHLDQTRQELSQALYQNDAACRVIARLVRERDEARAXXXXXXXXXXXXXXXXXXXXXXXXXEMETEVDGEE----------GISAAVHTQMQAKWKELSKKRKKRAMPDDLASPETVSAWGEVSSNTLHKTSPKGITCLDLHPSKPNLLLTGGVDKTAIVFDRDTQAQVATLSGHTKRVTDACFHPTRELLLTASVDKTARVWQAEEDGGGYKVAHVLDDHDGEVVGATXXXXXXXXXXXXKDKSWAFYDISRGRLLRHVKNDEYESGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGH 1401
            M CAISG+ PE PV+SKKSG ++EKRL+ ++++  GKCP TGE LT DDL+ + ++K  KPRP++AASIPGLL + Q EWD LML    L+Q L   RQELS ALYQ+DAACRVIARL  ERDEAR                            +   + EE          GISA + T++      LS++RKKR +P  LA  E++  + ++SS+ LHKTS  GI  +D+HPSK +++ TGGVD  AIVFDR +   ++TLSGH+KRVT   F P  E  +T S DKT RVWQ  EDG  Y   H+L DH  EV   T             D +W FYD+S G  L  V +     GY    FHPDGLILGTGT +ALVRIWD+K  +NVA F GH
Sbjct:    1 MICAISGEVPEEPVISKKSGLLFEKRLVERHVEDYGKCPVTGEALTMDDLISVKTNKTVKPRPLQAASIPGLLGMFQIEWDQLMLSHFALEQQLHTARQELSHALYQHDAACRVIARLKNERDEARTLLTQTERHVPMPASTAVAANDSTFSNGKRAAEDEELGSGGKKIRPGISANIITELTDCNAILSQQRKKRQIPPTLAPVESLEKYTQLSSHPLHKTSKPGILSVDIHPSK-DIIATGGVDTNAIVFDRTSGQIISTLSGHSKRVTSVKFVPQDEFFVTGSADKTVRVWQGSEDGN-YNCRHILKDHSAEVQAVTVHATNNYFVTASLDNTWCFYDLSSGLCLTQVGDASGGDGYTSAAFHPDGLILGTGTLEALVRIWDVKSQSNVAKFDGH 396
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BLAST of mRNA_C-linearis_contig8.15704.1 vs. uniprot
Match: A0A833V7Z2_9POAL (Pre-mRNA-processing factor 19 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833V7Z2_9POAL)

HSP 1 Score: 342 bits (876), Expect = 4.130e-107
Identity = 201/509 (39.49%), Postives = 270/509 (53.05%), Query Frame = 1 
Query:  238 MQCAISGQTPETPVVSKKSGHVYEKRLIIKYIDAEGKCPATGEELTADDLLELHSDKAAKPRPVEAASIPGLLAVMQNEWDDLMLETHTLKQHLDQTRQELSQALYQNDAACRVIARLVRERDEARAXXXXXXXXXXXXXXXXXXXXXXXXXEMETEVDGEE---GISAAVHTQMQAKWKELSKKRKKRAMPDDLASPETVSAWGEVSSNTLHKTSPKGITCLDLHPSKPNLLLTGGVDKTAIVFDRDTQAQVATLSGHTKRVTDACFHPTRELLLTASVDKTARVWQAEEDGGGYKVAHVLDDHDGEVVGATXXXXXXXXXXXXKDKSWAFYDISRGRLLRHVKNDEYESGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKKCTKVFAVKT----WGELASYDGYGGA--VTGVKFGKSASFLATSSMDRTVRFFG 1737
            M CAISG+ PE PVVSKKSGH++E+RLI +YI   G+CP T EEL+ DD+L + ++K  KPRP++AASIPGLL + QNEWD LML   +L+Q L   RQELS ALYQ+DAACRVIARL +ERDEAR                          E E   DG+    GI +A   ++    K LS +RK+R +P  LA  + + ++ ++SS+ LHKT+  GI  +D+HPSK +++ TGGVD  A++F+R +   ++TL+GH+K++T   F    EL++T S DKT R+WQ  +DG  Y  AH+L DH  EV   T             D +W FYD+  G  L+ V     E GY    FHPDGLILGTGT ++LV+IWD+K  A V NF+GH                                                                  +V+ V      W  + ++    G   VT VKFG  A ++A  SMDR +R FG
Sbjct:    1 MICAISGEVPEDPVVSKKSGHLFERRLIERYIQDHGRCPVTKEELSMDDILPVKTNKTVKPRPLQAASIPGLLGMFQNEWDALMLSNLSLEQQLHTARQELSHALYQHDAACRVIARLKKERDEARLLLSQAERQLPAATAPALSNGKRVA-EDEVGPDGKRIRPGIDSATVDELAEYNKMLSAQRKQREIPATLAPIDALESYTQISSHPLHKTNKPGILSIDIHPSK-DIIATGGVDTNAVIFNRASGQILSTLTGHSKKITSVKFVGRDELVITGSADKTVRLWQGTDDGT-YNCAHILKDHTAEVQAVTVQATKKYFVSAGMDNTWCFYDLPTGSCLKQVGEPSQEGGYTTAAFHPDGLILGTGTSESLVKIWDIKTQAFVTNFEGHSGPVTAMSFSENGYFLATAASDGVRLWDLRKLRNFRTFSPYDVNTPTNSVEFDFSGSYLAIAGSDIRVYQVANVKLEWNLIKTFPDLSGTGKVTSVKFGADAKYMAVGSMDRNLRIFG 506
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BLAST of mRNA_C-linearis_contig8.15704.1 vs. uniprot
Match: A0A4Y7L8Z3_PAPSO (Pre-mRNA-processing factor 19 n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7L8Z3_PAPSO)

HSP 1 Score: 340 bits (873), Expect = 1.160e-106
Identity = 208/518 (40.15%), Postives = 270/518 (52.12%), Query Frame = 1 
Query:  238 MQCAISGQTPETPVVSKKSGHVYEKRLIIKYIDAEGKCPATGEELTADDLLELHSDKAAKPRPVEAASIPGLLAVMQNEWDDLMLETHTLKQHLDQTRQELSQALYQNDAACRVIARLVRERDEAR-----AXXXXXXXXXXXXXXXXXXXXXXXXXEMETEVDGEE---GISAAVHTQMQAKWKELSKKRKKRAMPDDLASPETVSAWGEVSSNTLHKTSPKGITCLDLHPSKPNLLLTGGVDKTAIVFDRDTQAQVATLSGHTKRVTDACFHPTRELLLTASVDKTARVWQAEEDGGGYKVAHVLDDHDGEVVGATXXXXXXXXXXXXKDKSWAFYDISRGRLLRHVKNDEYESGYNCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKKCTKVF----------AVKTWGELASYDGYGGAVTGVKFGKSASFLATSSMDRTVRFFG 1737
            M CAISG+ PE PVVSKK+GH++EKRL+ ++++  GKCP TGE LT DDL+ + ++KA KPRP++AASIPGLL + Q EWD LML    L+Q L   RQELS ALYQ+DAACRVIARL +ERDEAR     A                         ++  + DG+    GISA +   +      LS++RKKR +P  LA  + +  + ++SS+ LHKT+  GI  +D+HPSK +++ TGGVD  AIVFDR +   ++TLSGH+K+VT   F P  +  +TAS DKT RVWQ  EDG  Y   HVL DH  EV   T             D +W FYD++ G  L  V +     GY    FHPDGLILGTGT  A VRIWD+K  +NVA F+GH                                                                  +V+           VKT+ +L+      G  T VKFG +A +L   SMDR +R FG
Sbjct:    1 MICAISGEVPEEPVVSKKTGHLFEKRLVERHVEDFGKCPVTGEPLTMDDLMPVKTNKAVKPRPLQAASIPGLLGMFQIEWDQLMLSHFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARTLLTLAERHVPLPASTTANDSTFNNGKRAAEDVNMDHDGKRSLPGISADIIADLTDCNTLLSQQRKKRQIPSTLAPVDALERYTQLSSHPLHKTNRPGILSVDIHPSK-DIIATGGVDTNAIVFDRTSGQILSTLSGHSKKVTSVKFVPKDDFFVTASADKTVRVWQGSEDGN-YNCRHVLKDHIAEVQAVTVHATNNYFVSASLDSTWCFYDLTSGSCLTQVGDTSDGDGYTSAAFHPDGLILGTGTSQANVRIWDVKSQSNVAKFEGHSGPVSAISFSENGYFLATAADDGVKLWDLRKLRNFRTFAPYDSNTSTNSVDFDHSGSYLAIAGSDIRVYQVANVKSEWNCVKTFPDLSGT----GKATSVKFGPNAQYLTVGSMDRNLRIFG 512
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15704.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEL3_9PHAE5.520e-24586.90Pre-mRNA-processing factor 19 n=2 Tax=Ectocarpus T... [more]
A0A6V1T7M8_HETAK2.640e-13649.70Pre-mRNA-processing factor 19 n=1 Tax=Heterosigma ... [more]
A0A835YI40_9STRA2.030e-13150.30Pre-mRNA-processing factor 19 n=1 Tax=Tribonema mi... [more]
D5A9Q1_PICSI2.060e-10847.62Pre-mRNA-processing factor 19 n=2 Tax=Picea sitche... [more]
B6TRQ7_MAIZE4.470e-10839.77Pre-mRNA-processing factor 19 n=13 Tax=Panicoideae... [more]
A0A1Y1Z4H6_9FUNG4.750e-10845.24Pre-mRNA-processing factor 19 n=1 Tax=Basidiobolus... [more]
A0A2R6W4B2_MARPO6.120e-10840.23Pre-mRNA-processing factor 19 n=1 Tax=Marchantia p... [more]
A0A200PVU9_9MAGN1.150e-10747.74Pre-mRNA-processing factor 19 n=1 Tax=Macleaya cor... [more]
A0A833V7Z2_9POAL4.130e-10739.49Pre-mRNA-processing factor 19 n=1 Tax=Carex little... [more]
A0A4Y7L8Z3_PAPSO1.160e-10640.15Pre-mRNA-processing factor 19 n=2 Tax=Papaver somn... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:2706817..2718269 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score699.5
Seed ortholog evalue1.1e-198
Seed eggNOG ortholog2880.D7G8G6
Preferred namePRPF19
KEGG koko:K10599,ko:K14808,ko:K20368
KEGG TC8.A.61
KEGG Pathwayko03040,ko04120,map03040,map04120
KEGG ModuleM00353,M00355
Hectar predicted targeting categoryother localisation
GOsGO:0000075,GO:0000077,GO:0000151,GO:0000209,GO:0000244,GO:0000245,GO:0000349,GO:0000375,GO:0000377,GO:0000381,GO:0000387,GO:0000393,GO:0000398,GO:0000726,GO:0000974,GO:0001701,GO:0001824,GO:0001832,GO:0001833,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005694,GO:0005730,GO:0005737,GO:0005811,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006302,GO:0006303,GO:0006325,GO:0006396,GO:0006397,GO:0006464,GO:0006508,GO:0006629,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0006974,GO:0006996,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0008104,GO:0008150,GO:0008152,GO:0008283,GO:0008380,GO:0008610,GO:0009056,GO:0009057,GO:0009058,GO:0009507,GO:0009536,GO:0009605,GO:0009607,GO:0009617,GO:0009790,GO:0009792,GO:0009893,GO:0009987,GO:0010035,GO:0010038,GO:0010467,GO:0010468,GO:0010498,GO:0010604,GO:0010628,GO:0010720,GO:0010721,GO:0014013,GO:0014015,GO:0016043,GO:0016070,GO:0016071,GO:0016567,GO:0016604,GO:0016607,GO:0016740,GO:0019219,GO:0019222,GO:0019538,GO:0019787,GO:0022008,GO:0022607,GO:0022613,GO:0022618,GO:0023052,GO:0030154,GO:0030163,GO:0030312,GO:0031323,GO:0031325,GO:0031461,GO:0031570,GO:0031974,GO:0031981,GO:0032446,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033120,GO:0033554,GO:0034450,GO:0034613,GO:0034622,GO:0034641,GO:0035556,GO:0035861,GO:0036211,GO:0040007,GO:0042221,GO:0042742,GO:0042770,GO:0042802,GO:0043009,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043484,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045595,GO:0045596,GO:0045597,GO:0045664,GO:0045665,GO:0045666,GO:0045685,GO:0045687,GO:0045786,GO:0045935,GO:0046483,GO:0046686,GO:0048024,GO:0048026,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048589,GO:0048699,GO:0048710,GO:0048711,GO:0048731,GO:0048856,GO:0048869,GO:0050684,GO:0050685,GO:0050767,GO:0050768,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051093,GO:0051094,GO:0051171,GO:0051173,GO:0051179,GO:0051239,GO:0051240,GO:0051241,GO:0051252,GO:0051254,GO:0051276,GO:0051603,GO:0051641,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0051960,GO:0051961,GO:0051962,GO:0060255,GO:0060284,GO:0061630,GO:0061659,GO:0065003,GO:0065007,GO:0070013,GO:0070534,GO:0070647,GO:0070727,GO:0071006,GO:0071007,GO:0071012,GO:0071013,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0072395,GO:0072401,GO:0072422,GO:0080008,GO:0080090,GO:0090304,GO:0090734,GO:0098542,GO:0140096,GO:1901360,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1902494,GO:1903311,GO:1903313,GO:1990234,GO:1990904,GO:2000026
EggNOG free text desc.generation of catalytic spliceosome for first transesterification step
EggNOG OGsKOG0289@1,KOG0289@2759
Ec32 ortholog descriptionWD40 repeat
Ec32 orthologEc-14_002950.1
EC2.3.2.27,3.6.4.13
COG Functional cat.DK
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02000,ko03009,ko03041,ko03400,ko04121,ko04131
Exons13
Model size1850
Cds size1512
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930554.3553057-UTR-C-linearis_contig8:2706816..27068661622930554.3553057-UTR-C-linearis_contig8:2706816..2706866Chordaria linearis ClinC8C monoicousUTRC-linearis_contig8 2706817..2706866 +
1690881129.7477787-UTR-C-linearis_contig8:2706816..27068661690881129.7477787-UTR-C-linearis_contig8:2706816..2706866Chordaria linearis ClinC8C monoicousUTRC-linearis_contig8 2706817..2706866 +
1622930554.3729067-UTR-C-linearis_contig8:2708375..27085621622930554.3729067-UTR-C-linearis_contig8:2708375..2708562Chordaria linearis ClinC8C monoicousUTRC-linearis_contig8 2708376..2708562 +
1690881129.7709062-UTR-C-linearis_contig8:2708375..27085621690881129.7709062-UTR-C-linearis_contig8:2708375..2708562Chordaria linearis ClinC8C monoicousUTRC-linearis_contig8 2708376..2708562 +
1622930554.644584-UTR-C-linearis_contig8:2718168..27182691622930554.644584-UTR-C-linearis_contig8:2718168..2718269Chordaria linearis ClinC8C monoicousUTRC-linearis_contig8 2718169..2718269 +
1690881129.8987358-UTR-C-linearis_contig8:2718168..27182691690881129.8987358-UTR-C-linearis_contig8:2718168..2718269Chordaria linearis ClinC8C monoicousUTRC-linearis_contig8 2718169..2718269 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930554.414367-CDS-C-linearis_contig8:2708562..27085751622930554.414367-CDS-C-linearis_contig8:2708562..2708575Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2708563..2708575 +
1690881129.7817378-CDS-C-linearis_contig8:2708562..27085751690881129.7817378-CDS-C-linearis_contig8:2708562..2708575Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2708563..2708575 +
1622930554.4352307-CDS-C-linearis_contig8:2711297..27113951622930554.4352307-CDS-C-linearis_contig8:2711297..2711395Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2711298..2711395 +
1690881129.7949038-CDS-C-linearis_contig8:2711297..27113951690881129.7949038-CDS-C-linearis_contig8:2711297..2711395Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2711298..2711395 +
1622930554.4508297-CDS-C-linearis_contig8:2711932..27120521622930554.4508297-CDS-C-linearis_contig8:2711932..2712052Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2711933..2712052 +
1690881129.8031347-CDS-C-linearis_contig8:2711932..27120521690881129.8031347-CDS-C-linearis_contig8:2711932..2712052Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2711933..2712052 +
1622930554.4727085-CDS-C-linearis_contig8:2712690..27127801622930554.4727085-CDS-C-linearis_contig8:2712690..2712780Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2712691..2712780 +
1690881129.8112931-CDS-C-linearis_contig8:2712690..27127801690881129.8112931-CDS-C-linearis_contig8:2712690..2712780Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2712691..2712780 +
1622930554.4910352-CDS-C-linearis_contig8:2713344..27134801622930554.4910352-CDS-C-linearis_contig8:2713344..2713480Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2713345..2713480 +
1690881129.8217432-CDS-C-linearis_contig8:2713344..27134801690881129.8217432-CDS-C-linearis_contig8:2713344..2713480Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2713345..2713480 +
1622930554.512429-CDS-C-linearis_contig8:2713873..27139641622930554.512429-CDS-C-linearis_contig8:2713873..2713964Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2713874..2713964 +
1690881129.832643-CDS-C-linearis_contig8:2713873..27139641690881129.832643-CDS-C-linearis_contig8:2713873..2713964Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2713874..2713964 +
1622930554.531326-CDS-C-linearis_contig8:2714729..27148681622930554.531326-CDS-C-linearis_contig8:2714729..2714868Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2714730..2714868 +
1690881129.8440046-CDS-C-linearis_contig8:2714729..27148681690881129.8440046-CDS-C-linearis_contig8:2714729..2714868Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2714730..2714868 +
1622930554.555062-CDS-C-linearis_contig8:2715113..27154271622930554.555062-CDS-C-linearis_contig8:2715113..2715427Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2715114..2715427 +
1690881129.8546884-CDS-C-linearis_contig8:2715113..27154271690881129.8546884-CDS-C-linearis_contig8:2715113..2715427Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2715114..2715427 +
1622930554.572255-CDS-C-linearis_contig8:2716042..27161781622930554.572255-CDS-C-linearis_contig8:2716042..2716178Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2716043..2716178 +
1690881129.8672829-CDS-C-linearis_contig8:2716042..27161781690881129.8672829-CDS-C-linearis_contig8:2716042..2716178Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2716043..2716178 +
1622930554.5898724-CDS-C-linearis_contig8:2716657..27168851622930554.5898724-CDS-C-linearis_contig8:2716657..2716885Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2716658..2716885 +
1690881129.8755245-CDS-C-linearis_contig8:2716657..27168851690881129.8755245-CDS-C-linearis_contig8:2716657..2716885Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2716658..2716885 +
1622930554.6066713-CDS-C-linearis_contig8:2717435..27175311622930554.6066713-CDS-C-linearis_contig8:2717435..2717531Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2717436..2717531 +
1690881129.8834114-CDS-C-linearis_contig8:2717435..27175311690881129.8834114-CDS-C-linearis_contig8:2717435..2717531Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2717436..2717531 +
1622930554.6261396-CDS-C-linearis_contig8:2718117..27181681622930554.6261396-CDS-C-linearis_contig8:2718117..2718168Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2718118..2718168 +
1690881129.8910978-CDS-C-linearis_contig8:2718117..27181681690881129.8910978-CDS-C-linearis_contig8:2718117..2718168Chordaria linearis ClinC8C monoicousCDSC-linearis_contig8 2718118..2718168 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15704.1prot_C-linearis_contig8.15704.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig8 2708563..2718168 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig8.15704.1

>prot_C-linearis_contig8.15704.1 ID=prot_C-linearis_contig8.15704.1|Name=mRNA_C-linearis_contig8.15704.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=504bp
MQCAISGQTPETPVVSKKSGHVYEKRLIIKYIDAEGKCPATGEELTADDL
LELHSDKAAKPRPVEAASIPGLLAVMQNEWDDLMLETHTLKQHLDQTRQE
LSQALYQNDAACRVIARLVRERDEARAQMQTQRTALAQAQAAAPAAAAAA
VEEMETEVDGEEGISAAVHTQMQAKWKELSKKRKKRAMPDDLASPETVSA
WGEVSSNTLHKTSPKGITCLDLHPSKPNLLLTGGVDKTAIVFDRDTQAQV
ATLSGHTKRVTDACFHPTRELLLTASVDKTARVWQAEEDGGGYKVAHVLD
DHDGEVVGATVHATGDFMATASKDKSWAFYDISRGRLLRHVKNDEYESGY
NCVRFHPDGLILGTGTGDALVRIWDMKQAANVANFKGHEGGVNALAFSEN
GYYMASAGEDGYARLWDLRKLTNFDNLTIGDGAASSVAFDFSGSYLAAGG
KKCTKVFAVKTWGELASYDGYGGAVTGVKFGKSASFLATSSMDRTVRFFG
TAT*
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mRNA from alignment at C-linearis_contig8:2706817..2718269+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig8.15704.1 ID=mRNA_C-linearis_contig8.15704.1|Name=mRNA_C-linearis_contig8.15704.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=11453bp|location=Sequence derived from alignment at C-linearis_contig8:2706817..2718269+ (Chordaria linearis ClinC8C monoicous)
CGCGACGACGCGACACGGGCAGCAGGGCACGGCGCGTGGTTCGAGCAGAG
GTGAGATGCAAAAATTTAGCTCAAGGGTAGTCTTTTCCTTGCGTCTGTAG
TGCGGGATCCATGGAGAGGAAGCGAAGTGCTTGGTTTCCGCGCCACCAAA
CAGTCGCCCTTGCAAAGCAAGCTCCCTCTGTGGTTGTTCGCCGCTGCACG
GCTGTAGTCGCAGAGCGCGCGGCGGTGCTTCGCGGCTTCAATGGTTGCGT
GCTATGGATTCTACCGCTTCCATTTTCTGTGGTCGGTGGTTCGCTCGTTA
CTCCTCTGCCCTTTGTAGCTTAGCTCACCCCCGCCCACCTGGAGAGGGTC
TCGCTCCCAATAGACAGAGACACACACCTACAAATTGACTTGTTTTCAAT
CGGCGTACACGATACGACGCCGCCCTCCTTGCCTACCCTACAAGCCGGCC
GGGTCATTGGCATCATGTTCTCGGTGTCGTCTATGGCCATCATGACGATT
TGTTGGGTAGTGTCGGCGGCTGACGAATCTATATCTCACGAGGTTCGTGC
GCCTGTTTTTTTTGCGCCGCCTCCTGCACTCGCCATTGGCTAGTGTGGTG
TGGTGTGGTGTGGCTAGGTCACATCTAAAAAAACTGCAATACAATCTTAA
TCTTCGGCCTGAAAAGCAGTAGTGTCCCCACTGCCATTGGCTGTTGTGTG
CACAAGAGTAGCACTGAATTGCAGGCGTATCGGCTGCTGAACCTGCGATC
CTCAGTCAGTCGCTGCCGACAGCAAACCTACCTGCAGCAACACACCAACA
GACCAACACCGACACGCACACACAATAGTACCGAAATCATCTTCGTCGAC
GCCCCCCCATCACCTTTTCTGCCTGCTGGAAGCTGGAAGTGATTTCTCCG
CGAACGCCCCGAGGGAGCATGCATTTTTCACAAAAAAAATAATCTCCCCC
CCCCTTTCTTCGATTGTATCCCCGGCGGGGAGAGTGCTTTCACACAAAAA
AAAACAGAGTTCCCCCCCCCTCGGGTCGTTTCGTGGGAGACGGTAGGTAT
ATTTTCCCCACGTGACATGATGTATTTTGCCAGCAAGAAGCGTTGATTTG
GGATGGAATGGATTCATGGTCTCTTGTCGGCAGTACGAGTGCGTCGCTGC
TGCGCCATGAGCATCGCGTCATATGGAGCACTATGAAATGTCATCGTGGT
GTGTTGGTCAAAGATTAGAGATTCAAATAATTGGCACCGCCTGCAAACGA
AACAGCTACTCCGGAGTATGGTACATATTTTGCTGTCATACGTATGATAT
GACATGTTTTGTGTGTGTTTTTGTTCAACGAAAAAGAAAGAGATCTCCCC
CCCCCCCTTGTTCCATTCCATGTCTACCTCGGGGAGGTGTGTGTGCTTTC
ACAAAACAAATGAATTCCCCCCCCGGGGCGTCGACGGAGATGATAGTGTA
CGGCAATTGATATTTAGATAACGTCGGCGTCGGAAAGACGTTGGCACGTA
GTAGGGTAATGTGGACACTTTTAATTAAGACACATCTCTCTCTCTCTCTC
TTGCTCCAGGGGCAAAGAAGCAAAGAACAAAGAACAGAGAACCATCAGCG
AAGGAAGAAGGAGACGTCAGCAGCCAACACGGAACATATTGTCTTATCTT
GTCCGTGTGGAAGGGAATAGGGAGGGAAGCGAGACGGAGCGCTGGCGCTG
AAAGCACTCGCCTGCGTGGGAGGGGCACAGCACACCGTCGTTCACCATGC
AGTGCGCAAGTGAGGGGAAATAAGAGAGCGTTGCTGTTTCCGTTTGTGTC
GTGTCGTATCGTACCCTTGTTTGGGTGGACCGCTTGTAGGTATTCGGCAG
ATTAATCACGTTCTTGTTCCGTGCTGCCAGGTTGCCACGGACAAACACTT
GCACATACAAAATATCGTTGGTTGCCTGCCCGACGGGAAAACGATAGTTT
TGACGTGAATCATCCAAATGGTTTGCGTGCTATATTTCGCATCCTCCCTT
CTCTGTTGCCCCACCCATTACTATTATTTCTACTAAACGTCAGCGGTACG
TCCAACCTGTGCAAGTCGGTCTTCAGGGGGAATGTTGTGGAAACACAGAA
ACCCTCTCATCCTGTAATTTTGTAACGGACCAGCAAAAACACTAAAACGT
GCCTGGTGCGAGAAAATCCAATACTTCGTACACTGGCACGAGCCTCCCTC
CAACCTAATGTCCTGTGAGTATTTTTATTTTTATTTTACAGTCTGCCGCT
GCTGTGTAGCATATGACCAGTCTACTACATATGTTACCTGAAGTAGGACG
ATGGCGGCACAGATCGCAGTTCCGTCTTAAGATCAATTCATGCGCGCTCT
GTCGCTGTATGTTCCCGCGGTCCTGAACAACTAGACAACAAGACATTCGG
AAACAACAATTCTCGCGTGCTGCAATATTTTGTTTGGAATCATCAAACGT
CGTCATTCTGTCATTCTACGCCCAACTTAACGAAATAATTATGGGACGGA
AGATTTGGAAGCAGGCGAAGCCGGAGCGGTGGATTTGGTACTGGAGATTA
TCTTCCTCTGCTGCAGCTTTTCGGGAAAGCCCTTGCCCCGTGGTGTATTT
GTAAGTGGGGCGAGGGCGGTGGTGGTGGTGGTGCTGCTGCTGCTGCCACT
CGATCTCTTTGCCTCTTTTTCTTGACTCTACTCCTCCGTTCCCTCGTCTT
CCGACCATGGCCATGGCCGGCCCGATGTGGGGAGGGTCTTTCTGGCGGGT
GTAAGGCCGGACTCACCCTCAAGGAGTGATTCCTTCTTGCTACTACCCCG
GTCCTCACCGTCCGTGGTGTGGTGGTAGAGTTGGGTCAGCACGGTGCATC
AGGCACTCGCACCCCCTTTTTTTCAGTATTTATCTGCGTCATCGGATAGA
TAGCCTTTCTGCGTGAGCGGACAGGCGTGGTTAGTGTGTGCGCGGAGGCA
GATGGACACTGTGGCCGAAAGCTGGTTGCACCCAGTGTGCACCGGTGTGT
AGGATATGGACTCGGCGACAAGGATGGAGGGGAGGTCGCTGACGGATGGA
TGTGATCAGTAAGGTCGGATCCTCTGTTCGAGAAATCAAGAGATCAGCAC
CGGAGCGCATCATGAAGGAGGAGGGATACCGCACGAAGGAGCAGAAGGGG
CGACGGACTAACAACAACGAGAGATCGCGAGACCATGGACGCGGGCGAGG
ATGGACGAGAGCGCTTGGAGCTGGCCTCGTGAAAGGAAGAGCGAAGAACA
GAGAGAGGAGCAAGAAGATGGAATTTTCTACCGATTGTGTCAAAAATTGT
TTTGCTCTTGCATTAGATAAATACATGCAGAGGGTCTTTTATAGGACACT
CCGGACTAACCCTGTGTACGCCGATGATACGCACTAGGCCGTGAGTCTAG
ATTGTGAGTAGTAGGTGAACACATGACTTGTCTGTCGCATTTTGTTAGAC
TTGCATTTGTTTTGGCCCGAGCGTTCGAAGAAGACCGTCTCCCTGTTCAT
TTTTTTTTCTGATTTTTGGATCTTCCTATTCTGTCGTTTGAGTGCCGTCT
CCGCCGCGGTTTTGTTGTAGGACGGTCTATTGAGCAGCACTCCAGACAGC
AGTTGCAGTAGGTCTACCTCGGCGACTTATGTATGTGACACGCGGACTGT
TGCAGACAGAATTTTCGTGACTGGTCAACTTTTATTGCTGTAGTTCGATT
GGGCGTTCTCTATATTGATTCGTGGTGCAGGTTGCCTCACCCTCGTGTGT
TTTTGTGGTTTTATTTAGGCTTTCTGCTAGCCACGTTATGGTTTTTGGGT
ATTATTGATGGTAGGCTCCTTGCGCTCTGTGACCACGGAAATTGGCCGTG
TCTGTTGGATCAGTACGGACAAAGAGGGTACTGGGTGAAGAGATCGGGAT
GTTTTTTTATGTGAAGACAACAACAACAACAACAACTCCTGCAACCGGTT
GCCCCGGTGGACTAATGGTTTAACCTCGAACCCACTAGCAGCAAAGTCTG
GAGTTCAATTCCAAGCAAAGGTGATTATTTTGCGACTTTGCAGGTGAAAG
CGATAACATAGCTGAAAAAGCTCGTGAGTACCAAACTTCGACTTAGCACG
TTGACGAGGGAAAGGGATGGCTGCACCCTTCTCGCGATAAAATCCAAGGC
AAGCACCGCAGGAGGAAGGTGGGGCAAAAAAATAAACAGAAAAAAAGAAG
AAAAAAGCCCCAGTGTTTATTTACCCCCTCCTGTGTGACCCCGGTTGGTT
CTAGTTGTACAGAAAAACACACGAACAAGTGTAGTACTCTAAATACACCG
CAACGTGTAGTACACGTCTCGCCTTGATCGGAAAGGGACTGTCGCCAAAA
TAAATGGGACGAAAACACACGCACACACTCCTCCTCCTCCTCCTCTTCCT
CCTCCTAATCCTCCCGCCGCTGCTCGCTGCTTTGGCTGTCGTGATGATGC
GATGATGCGATGATTGGTACGATGACGACAGTCTCGGGACAGACGCCGGA
GACGCCGGTGGTGTCCAAGAAATCGGGCCACGTGTACGAGAAGCGATTGA
TCATCAAGTACATCGATGCAGAGGGGAAGGTGCGAGGCTTTCTTAAATAT
ATCTTGTACAAGCTCGTATTACTTACCTACCTGTCGGGTTTCTGTGGTGC
AGTTTGCTTCTGTCGCAAGTGGAGGGCTACGGGAGAGTGTCAGGGGGGTA
GGGGTAGGGATAGGGGGGGGGCGTTCTTGGCCTCGGCAATCATGCGTCCG
TTAGTGCCAGCCGTTGCTGTTTAGTTCCAAGTCCCTTCGGCCGTCACCTC
CCCCCCACTCGACAACCGTAAACCCCCTTCCCCGCTTGACTCCTTGTGCC
ACGCTCCCCGATATAGGCGTAAATCTTAATCTTATGCTTTACGTCGAATC
CCTGTCCGGTCTTCTGTCCTGTCTGTCCCTCTTCGTGTTTTGTGGTTTGT
TCCCACCCGCGATGTGTTTCTTCGATTACTGTCGTCAAACAAAACAAAAA
AACGAAACAAACACGTGTGTGCGAAATCGGTCCAATCGCATAAAACAAAC
CACAACGACGACGACAAACGACGACGACAACTAAATACGACATCGACAAC
GACAACGACGCCGCAGTGCCCCGCGACGGGCGAGGAGCTCACCGCGGACG
ACCTGCTGGAGCTGCACTCCGACAAGGCGGCCAAGCCCCGCCCGGTCGAG
GCCGCCTCCATCCCCGGCCTCTTGGCCGTCATGCAGGTGAGAAGCGAGGG
GAAGAAATACAGAGAGCCGGCCTAGGGGACGAAGAAAGGGAGGGGGGGGG
CAGATGACGGGATGAGCAGAGAAAACAACGAACTTGAGGAGCGGGCACGA
GGAAAGCGGGGGAGGGGGGGTGGAGGGGGGATTCCCACTGCCCTCCACGG
GCGGTAGCTGGAAGGCCTTCGTGGACGTATTCATGCGGTGAATTTCGAAA
CGGGCGGGGGCGGGGGAATCCTAACCCTGAAGGGGGCAGCTTTAGTGGCC
TCGTTTTTTGCCCTTGCCTTGTTTTTACACAATTGTGTATTCTCTCGTTG
TTGGTTGCACGTCATTCCCAACTCGCACCGTAAATTTCCAACACTTTCGT
ATCGTGTTATGTACCATTACTTTGTGCCATTGCCCCCTTCCCGTTTCTTC
ACTTTCCTCTCCATACCTGATCTAAATTTACGGTTGGATATGACCCTGAT
CCCCCCCCTCATTTTCAATGAAGCCCCCTTCAAGCTCAACCAAAGCCCTA
ACCCTACCTCCACACCTCCACCCTTACATCCGGGCCCCCCGGTCTGACGC
TCGCTTGCTTTTATCTTTTGTTTCGCTCGTTATTTTATCTTTTGTTTGCA
CAACACAACACAACACGTTGACAGAACGAGTGGGATGACCTGATGCTCGA
GACTCACACGCTGAAGCAGCACCTCGACCAGACGAGGCAGGAGCTGAGCC
AGGCCCTGTACCAGGTGAGAAAAAAGAAGGAAGAGAAGAAAAGGGACAGG
AAGAGACCGCAGCAAAACGAAAATAAGTTGTTTCTCTCTTCTCTCTCTCT
CTCTGTTGTTGTTTTTTTGTATCAGCCGAAAAGTAGATACATCGGAGATT
GATTCAAGAGGGAGGAACCACCCAAGACTATCCCACCATCAAAATCTTCC
ACAGAAGTTCTCGGTAGGATATTGGATCTGCTACAGAACTCACAGAAGTT
GTCGGTAGAGTACCGCAACTGCTACAGAACTCACAGAAGTCCTCGGTAGG
GTACCGAAATTGTCACAGAACGCACAGAAATTGTCTGTGGAGCAATTACA
GAAATTACCCCCGGTATAGATCTGTGGGTACCCTACAGAACCTGACCGTG
AAATCTTCCTCGTCTCGCTGGCGCTTTTAAGAGTACAGGTTGTGCTCCGC
CATTGAAAAATAATGGCTCAAACAAATCGCTTTAACTTGTACAATACGTA
GGCGCTGAAAGTCCTCCCTCCCCCCCCCCCCGACAACTATGACAATGATA
ATGATAATACACATTTGCTTTTCTTCAGAACGACGCGGCTTGTCGCGTGA
TCGCGCGGCTGGTTCGTGAGCGTGACGAGGCCCGGGCGCAGATGCAGACG
CAGAGGACTGCGCTAGCTCAGGCGCAGGCGGCTGCCCCGGCCGCGGCTGC
GGCGGCGGTGGAAGGTGCGCGGGTTGTAGTTGGCTTTACTTTTCGTACAA
GTAGGCATATGTGTGGCATGTTTGTGTGTTGGTTTGTTTGTTTGTGAGCC
GCAGCGATGGATCGACGGATCGATGGTGTGGCTGGCTGCTGCGATCGGTC
GGTCGGTCGATGGCGTTTTTGTTGTTGTAATGGCAATGCGGGGCGGGGCG
GTGTGTTTCTTGTCTGTCTGGCTGCTTGTTTTTGTAAAGCCGCTCGATAG
CCTTTTTCACCACTCGTTTGGAGTACAAGACTTTGTGTTGTGTGCGCATG
CAAGCAACCTCGTTCCTCCGGCCGGTTAGTTGAATCGCTGACTCGAACGA
GACGATGGTGTTCGTTGTTGTTGTTTCTTTCATTTGGTGTGTGATGATGG
CTTTCAGAGATGGAGACGGAGGTCGACGGCGAGGAGGGTATCTCGGCGGC
GGTGCACACGCAGATGCAGGCCAAGTGGAAGGAGCTCTCTAAGAAGAGGT
GCGATCCTATCCTATACTATCCTATCCTTGTGTGTAGTGTTACTCTTGCT
CTTGCCTGGCGGAGCGTCGGAAGTTGAGTCGTATGGTGGCGTTTGCTTCT
GCAACCGAGTAGAGCCCGGTCTTTCCTTGGCTTTTGTTCTTTTGTGCGGG
TGGACGAGGAACGAAATCTGCTTTATATGCTCATATCCCGGAAAGCAATA
AATGCAGTTGTTGTTGTGGTGGTGGCAGTGGTAGTTGTGGTTATCGCCAC
TCCTTGGTGACTTCAGCATGGGCAGAGTTTTGAGCTGTCTTGTGACAGAG
TAGTGTGACGGTAGTCAGCGCACTTTGCACTGAAAACTGCAACATCCAAT
TCAAAACCATGCAAATCAAGTACAAAGATACAAGCAAGGCAACTGAGCTC
CAAGTGTGACACAGAGGGTTGTCGGTTCGTTGGGGTAGAGGAGAGGAGAC
GAGACGAGAGGAGGGGCAGGAGATCGTAAGCGTCACGCTGCAGCTACATG
GTGGCTTTGATGACGCGTCCGCGCCGGCTGGTTGCTGCAGTTGGACCGAA
AGAATAGAATTCCCGCCACTGTTGGATCCTTTCCGGTGATGGGTCGCATC
ATCCATCCCCCCGCGTCGGTGCCTCTGACCCCCCGACCCCCCTCCCGGCA
GAAAGAAAGAAGCACATGGCACGAAATGAGTCATCCTTGGACGAATGAAC
CAATCAGCAACACGCACGACCGAACCAAACCCAAGACCCGGCGATCGCTT
TGTGCAACGACAGGAAGAAGAGGGCCATGCCGGACGACCTCGCCTCCCCG
GAGACCGTGTCCGCGTGGGGAGAGGTGTCGAGCAACACCCTGCACAAGAC
CAGCCCCAAGGGGATCACGTGCCTCGACCTTCACCCTTCCAAGCCCAACC
TGGTGAGAGAAAGCCCTATCCCTGCCGGCCACACGCGCCTGCCGCTCGGG
GCGGCCGCGGCTAGTCTAACCGGGTGCGAGACGAGGATGGGGAGGGGAGT
GCCACCGGTCTCCCTACCTTACACATGTACTTCGATGCACACGAAAAAGT
CCCGCCCCCATGGCGCTACAAAGCATCATAAATGTCACGCAAACAAATCG
ACCTTATCCTACCTCCCACGCAAAAACCGCCAAAACCGAGACAACAGCTG
CTCACCGGCGGCGTGGACAAGACGGCGATCGTGTTCGACCGCGACACCCA
GGCGCAGGTGGCCACCCTTTCCGGCCACACCAAGCGGGTCACGGACGCGT
GCTTCCACCCCACCCGGGAGCTGCTGCTCACGGCATCGGTCGACAAGACG
GCGCGCGTGTGGCAGGCGGAGGAAGACGGGGGCGGGTACAAGGTGGCCCA
CGTGCTGGACGACCACGACGGGGAGGTGGTGGGTGCGACGGTGCACGCCA
CGGGGGACTTCATGGCCACCGCCTCCAAGGACAAGAGCTGGGCGTTCTAC
GACATCAGCAGGTGTGTGGTGTGGTGGACAGCATAACATCAACAGCAGTA
GTGCTGAAGTCGGGGGTTTTTGGGCGGGATGGGGTTGTTATTGGGGTTCG
GGTTGTGGTTGGGACGTTTTACTGTGTAGGTTTGCGTAGCAGTGATCATG
TGGGGGGGGGGCGGCTGGGATGATGCTGCTGCTGGTGATGATGGGGGTGG
CGGCCCGGGTCTTCTTTGTGACTGTTGTATGGGTTCGTTGCGAAAGCGAG
ACAGCGCGATAATTGAAACTCTCTGTGGAATGTTTCTAAGCAGCGTGCTA
CAGCAGCAGCGTGGCAACCAACATCCCATCCTACCCCCACTAAAATGGCT
GCTGTACGTATGTGTCTTAGGAAAAAGTCAAGGCCTTGTCCCCGTGGTGT
GGCGTTTGCTCTGGTGTTGGCTGCTCCTTCCAAGTCAAAAGCGTACACCC
AACCTTAACCTTCATAAACCAACCGCAATCGAAGTCTCGACCAGAACCCA
AAGCTCAATTTCCACCTCCACATAAAACCAGGAGCCGGCCGACAGGTGGC
AGCAACCACATTGCCCCAACACTCCAACACTTACACGCCTGATTGAACCG
TTTGACCATAACTTTTTTGGAAACAGGGGGAGGTTGTTGAGGCACGTCAA
GAACGACGAGTACGAGTCGGGCTACAACTGCGTCCGCTTCCACCCCGACG
GTCTCATCCTCGGTACTGGCACCGGCGACGCTCTCGTGCGCATCTGGGAC
ATGAAACAGGCGGTACGTTTTTTTATTTCTATAGGTGGTGCGGTATGGTG
TGGTGAGGCGGGGCATCTCTACAACTACAGCGGGGTGTAGTTCTGTCATT
CTATCACCGAACCGGAACCGTTCACCTCGTGAACACATACCTAGCGGACA
CAAGGAACACGAGCCTTTTACCGTGTCTTGCTTCTTCTTCTTCTTCTTTT
CTGCGTGGCCGGGCGACTCAGCTCTCCAGGCCACCTTACAGCTCTCGATT
CGCACGCACCACAAGCACTTTTGTTTTTGTAACACCCAGCTCGTTGTGTA
TTTGCGTGCTTCCTTGCCCCCTTGACCCTTGACCTTCCATCCCCAAAACA
ACGAAGCACACCACACCACACGCCCGTATCACTCATCACAAGCCCCCTCT
CCACCCTTGGTATCGGCTCCCTCCGCCCTCTCCCGCCGCCTACTGCCATC
CCACCACCACCCAACCCCAACCCCCACCCCCACCCCAACAGGCAAACGTG
GCGAACTTCAAGGGCCACGAGGGCGGGGTGAACGCCCTGGCGTTCAGCGA
GAACGGTTACTACATGGCCTCGGCCGGGGAGGACGGGTACGCCCGCCTGT
GGGACCTTCGCAAGCTCACCAACTTCGACAACCTGACGATCGGGGACGGC
GCCGCCTCGTCGGTGGCCTTCGACTTCTCCGGGTCGTACCTGGCGGCCGG
CGGCAAGAAGTGCACCAAGGTTTGTGTGTGTGTGTGTATGTGTGTGTGTG
TTTATTATTGTTTTTTGAAAGAAAAATCATGAAATCAAGGACGGAACCTC
CCCACATTAGAGACGGGGCTCCGTGGGCTCAAAACGGTGTTTCATGCAGT
GGTGGAATGTGGGTCCGGCGGAGATTTTTTTTCAAGTTTTTGGAGGGAGA
GGTGCGGTGGTGGGTGAAGAACGAACTAGAATGCGGTCGTGGGCGCGCGT
TGGTTAAGGGTTGACGGGGGCTTCGGGTGTCTTGGTGTGTCTTCGGAGAC
GGGCAAGACAGGCAAGATGCCCATGGGGGAGTACCGCCGTGGTATGTAGG
CCGTTCAGTATCGGAAAACGTGGGTGCAGTTTGTACCCCAAGAGACTGCT
GTCAACAACTTAACAGTCAACAACTTAACAAGGACAAGTGTACACGCGTA
CACGCCGCAAGAGTCTGATACATCGTATCCCTGCCAGCTGAATAGCAACG
TCCCGCTCCCCCCCCCCGCTCGCGTGGTAAATACACGCACGCTGCCGTCT
TGTTCTTGCGTGCGTCCAGGTGTTCGCGGTCAAGACCTGGGGCGAGCTGG
CTTCCTACGACGGCTACGGTGGGGCCGTGACGGGCGTCAAGTTCGGCAAG
AGCGCTAGTTTCTTGGTGAGAAAAAAGATTCCACATCTCTGGGCAAGAAC
AACAATTCAAAGGTTTACAGCACGCAACATGCTATACTTCGAGCGGCGTT
CTCGTACCTATTTGCGGCTCTTGTTTGCGCGCGGGTTTGTTTTTACCGAG
GATGCGGGCGAGTAGGTATACTTTTGCGGGCGCCTCGCTGTGCTGCTGCT
GTTCTCCTTGTGAGAACGCACCAAATGGCGGTGGTGATGGGCGGCGTGGT
TCGAGGCACGCTTTGAAGCCCCAACGTATTTGAATTTTCGCACGTACGGC
ATCCGCGCGAGTTTTGCGGCGCATGTGGAGGACGAGAAGCTTATTTTTGT
GGTGTTGCCTCCCTGTTGCGTACGGAGACGTAAAAATGTATTTTCGCGTC
GTTTGGCCTTGCCTTTGTGGAACGGGTCGACTGTTGTTGTAGCGCAAATC
TCTCCGCCTTCCTGTTTGCGAGTGGCGCATGCTCACGCGGGGTATCCTTC
AATGGTGTTGTATTTTTTCTGAACGTGTGTCGTCTTGCTCACCGCCCATT
CCAACCCCACCTTTCTTTCCTTTTTTCCCGTCGGTCGCAACGCTTGGCCA
GGCTACGTCGTCGATGGACAGGACGGTGCGCTTCTTCGGCACCGCCACGT
AAACGCGTGCGGCGGGCAGGGCAGACAGCCCTTTGGCGGCCGACGCCGAA
AGAATGAACGAAGAATGAACGAAGAATGTAGACTATGTGGTGTAGCTGAA
ACG
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Coding sequence (CDS) from alignment at C-linearis_contig8:2706817..2718269+

>mRNA_C-linearis_contig8.15704.1 ID=mRNA_C-linearis_contig8.15704.1|Name=mRNA_C-linearis_contig8.15704.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3024bp|location=Sequence derived from alignment at C-linearis_contig8:2706817..2718269+ (Chordaria linearis ClinC8C monoicous)
ATGCAGTGCGCAAATGCAGTGCGCAATCTCGGGACAGACGCCGGAGACGC
CGGTGGTGTCCAAGAAATCGGGCCACGTGTACGAGAAGCGATTGATCATC
AAGTACATCGATGCAGAGGGGAAGTCTCGGGACAGACGCCGGAGACGCCG
GTGGTGTCCAAGAAATCGGGCCACGTGTACGAGAAGCGATTGATCATCAA
GTACATCGATGCAGAGGGGAAGTGCCCCGCGACGGGCGAGGAGCTCACCG
CGGACGACCTGCTGGAGCTGCACTCCGACAAGGCGGCCAAGCCCCGCCCG
GTCGAGGCCGCCTCCATCCCCGGCCTCTTGGCCGTCATGCAGTGCCCCGC
GACGGGCGAGGAGCTCACCGCGGACGACCTGCTGGAGCTGCACTCCGACA
AGGCGGCCAAGCCCCGCCCGGTCGAGGCCGCCTCCATCCCCGGCCTCTTG
GCCGTCATGCAGAACGAGTGGGATGACCTGATGCTCGAGACTCACACGCT
GAAGCAGCACCTCGACCAGACGAGGCAGGAGCTGAGCCAGGCCCTGTACC
AGAACGAGTGGGATGACCTGATGCTCGAGACTCACACGCTGAAGCAGCAC
CTCGACCAGACGAGGCAGGAGCTGAGCCAGGCCCTGTACCAGAACGACGC
GGCTTGTCGCGTGATCGCGCGGCTGGTTCGTGAGCGTGACGAGGCCCGGG
CGCAGATGCAGACGCAGAGGACTGCGCTAGCTCAGGCGCAGGCGGCTGCC
CCGGCCGCGGCTGCGGCGGCGGTGGAAGAACGACGCGGCTTGTCGCGTGA
TCGCGCGGCTGGTTCGTGAGCGTGACGAGGCCCGGGCGCAGATGCAGACG
CAGAGGACTGCGCTAGCTCAGGCGCAGGCGGCTGCCCCGGCCGCGGCTGC
GGCGGCGGTGGAAGAGATGGAGACGGAGGTCGACGGCGAGGAGGGTATCT
CGGCGGCGGTGCACACGCAGATGCAGGCCAAGTGGAAGGAGCTCTCTAAG
AAGAGAGATGGAGACGGAGGTCGACGGCGAGGAGGGTATCTCGGCGGCGG
TGCACACGCAGATGCAGGCCAAGTGGAAGGAGCTCTCTAAGAAGAGGAAG
AAGAGGGCCATGCCGGACGACCTCGCCTCCCCGGAGACCGTGTCCGCGTG
GGGAGAGGTGTCGAGCAACACCCTGCACAAGACCAGCCCCAAGGGGATCA
CGTGCCTCGACCTTCACCCTTCCAAGCCCAACCTGGAAGAAGAGGGCCAT
GCCGGACGACCTCGCCTCCCCGGAGACCGTGTCCGCGTGGGGAGAGGTGT
CGAGCAACACCCTGCACAAGACCAGCCCCAAGGGGATCACGTGCCTCGAC
CTTCACCCTTCCAAGCCCAACCTGCTGCTCACCGGCGGCGTGGACAAGAC
GGCGATCGTGTTCGACCGCGACACCCAGGCGCAGGTGGCCACCCTTTCCG
GCCACACCAAGCGGGTCACGGACGCGTGCTTCCACCCCACCCGGGAGCTG
CTGCTCACGGCATCGGTCGACAAGACGGCGCGCGTGTGGCAGGCGGAGGA
AGACGGGGGCGGGTACAAGGTGGCCCACGTGCTGGACGACCACGACGGGG
AGGTGGTGGGTGCGACGGTGCACGCCACGGGGGACTTCATGGCCACCGCC
TCCAAGGACAAGAGCTGGGCGTTCTACGACATCAGCAGCTGCTCACCGGC
GGCGTGGACAAGACGGCGATCGTGTTCGACCGCGACACCCAGGCGCAGGT
GGCCACCCTTTCCGGCCACACCAAGCGGGTCACGGACGCGTGCTTCCACC
CCACCCGGGAGCTGCTGCTCACGGCATCGGTCGACAAGACGGCGCGCGTG
TGGCAGGCGGAGGAAGACGGGGGCGGGTACAAGGTGGCCCACGTGCTGGA
CGACCACGACGGGGAGGTGGTGGGTGCGACGGTGCACGCCACGGGGGACT
TCATGGCCACCGCCTCCAAGGACAAGAGCTGGGCGTTCTACGACATCAGC
AGGGGGAGGTTGTTGAGGCACGTCAAGAACGACGAGTACGAGTCGGGCTA
CAACTGCGTCCGCTTCCACCCCGACGGTCTCATCCTCGGTACTGGCACCG
GCGACGCTCTCGTGCGCATCTGGGACATGAAACAGGCGGGGGAGGTTGTT
GAGGCACGTCAAGAACGACGAGTACGAGTCGGGCTACAACTGCGTCCGCT
TCCACCCCGACGGTCTCATCCTCGGTACTGGCACCGGCGACGCTCTCGTG
CGCATCTGGGACATGAAACAGGCGGCAAACGTGGCGAACTTCAAGGGCCA
CGAGGGCGGGGTGAACGCCCTGGCGTTCAGCGAGAACGGTTACTACATGG
CCTCGGCCGGGGAGGACGGGTACGCCCGCCTGTGGGACCTTCGCAAGCTC
ACCAACTTCGACAACCTGACGATCGGGGACGGCGCCGCCTCGTCGGTGGC
CTTCGACTTCTCCGGGTCGTACCTGGCGGCCGGCGGCAAGAAGTGCACCA
AGGCAAACGTGGCGAACTTCAAGGGCCACGAGGGCGGGGTGAACGCCCTG
GCGTTCAGCGAGAACGGTTACTACATGGCCTCGGCCGGGGAGGACGGGTA
CGCCCGCCTGTGGGACCTTCGCAAGCTCACCAACTTCGACAACCTGACGA
TCGGGGACGGCGCCGCCTCGTCGGTGGCCTTCGACTTCTCCGGGTCGTAC
CTGGCGGCCGGCGGCAAGAAGTGCACCAAGGTGTTCGCGGTCAAGACCTG
GGGCGAGCTGGCTTCCTACGACGGCTACGGTGGGGCCGTGACGGGCGTCA
AGTTCGGCAAGAGCGCTAGTTTCTTGGTGTTCGCGGTCAAGACCTGGGGC
GAGCTGGCTTCCTACGACGGCTACGGTGGGGCCGTGACGGGCGTCAAGTT
CGGCAAGAGCGCTAGTTTCTTGGCTACGTCGTCGATGGACAGGACGGTGC
GCTTCTTCGGCACCGCCACGTAAGCTACGTCGTCGATGGACAGGACGGTG
CGCTTCTTCGGCACCGCCACGTAA
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