prot_C-linearis_contig8.15703.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15703.1
Unique Nameprot_C-linearis_contig8.15703.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length460
Homology
BLAST of mRNA_C-linearis_contig8.15703.1 vs. uniprot
Match: A0A6H5JJ70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ70_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 2.820e-67
Identity = 225/431 (52.20%), Postives = 262/431 (60.79%), Query Frame = 0
Query:   48 LLAQAECGGGIEGILSSDGTTCCLEACGLCGGSGCSDVEGTLD-TDCCVNDIKDTERTCGVGGVVAPCTIDPDNPLT-------TPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------VPPPGSISTCENGFPGFQTQEACCSEFCGSCGGSGCGALGSADCCVDNIIEGDRVCDVNAFEAPCIIVSLTPSPLAAGQTRAPLMVATPAPFLGPVVPTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAATEAXXXXXXXXXXXXXXXEVP--VEP------AQTPAPTVEVCAEGLEGFRHGIVCCPLECGQCGGSGCDNLPGGATGCCSDAILFEGVRCNGAEVVAPCIIGSVDDVVGAANAETS 452
            +L +AEC  G+EGILSS+   CC+ ACG+CGGSGCSDVEGT   +DCCV+DI D++ TCGV   VAPC +DPD   T       TPAP XXXXXXXXXXXXXXXXXXXXXXX       XXXXXXXX                            XXXXXXXXXXXXXXXX           P  G+ S CENG+PG+Q+ EACCSEFCG CGGSGCG LGSA CC DNII    VC V+  EAPCII++ TP+PLA G T      AT A           XXXXXXXXXXXXXXXXXXXXXXX      V+  +                 VP  V P        TPAP+   C +G+EGFRHG+ CC + CGQCGG+GC+NL GGA+ CCS  +L     C+ + V APC++G V  V GAA+A+T+
Sbjct:    1 MLVEAECVAGVEGILSSNEEVCCIAACGMCGGSGCSDVEGTDGGSDCCVDDILDSDVTCGVDDGVAPCIVDPDIITTPSATEAATPAPAXXXXXXXXXXXXXXXXXXXXXXXTTTAPGQXXXXXXXXIAPSSTSPTESLTATAQPAAAPVVVAAPXXXXXXXXXXXXXXXXXXXAGSFTPVAPVAGASSYCENGYPGWQSNEACCSEFCGQCGGSGCGELGSATCCYDNIISAGLVCGVDVLEAPCIIINYTPAPLAEGVTAP----AT-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVATESPVSRGDVGVPTPSPGGSEAPQESVPPSVTPPVGGAVGTTPAPSAPECDDGIEGFRHGVACCSVSCGQCGGAGCENLEGGASECCSHDVLATNNLCSESGV-APCVLGPVSQVDGAADADTT 425          
BLAST of mRNA_C-linearis_contig8.15703.1 vs. uniprot
Match: D7G8G7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8G7_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 1.190e-53
Identity = 223/427 (52.22%), Postives = 256/427 (59.95%), Query Frame = 0
Query:   76 LCGGSGCSDVEGTLDTDCCVNDIKDTERTCGVGGVVAPCTIDPD------------------------------------NPLTTPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPP-PGSISTCENGFPGFQTQEACCSEFCGSCGGSGCGALGSADCCVDNIIEGDRVCDVNAFEAPCIIVSLTPSPLAAGQTRAPLMVATPAPFLGPVVPTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAATEAXXXXXXXXXXXXXXXEVPVEPAQ-------------TPAPTVEVCAEGLEGFRHGIVCCPLECGQCGGSGCDNLPGGATGCCSDAILFEGVRCNGAEVVAPCIIGSVDDVVGAANAETS 452
            +CGGSGCSDV+GT  ++CCV+ I D++ TCGV   VAPC +DPD                                       T P P       XXXXXXXXXXX     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   V P  G+ S CENG+ G+Q  EACCSEFCG CGGSGCG LGSA CC DNII   +VC V+  EAPCII++ TP+PLA G+T APL   T             XXXXXXXXXXXXXXXX     XXXXXXX    +                 E P E                TPAP+   CA+G+EGFRHG+ CC + CGQCGG+GC+ L GGA  CCS  +L     C+     APC++G V +V GAA+A+T+
Sbjct:    1 MCGGSGCSDVDGTRGSECCVDHILDSDVTCGVDDGVAPCIVDPDIITTPSAAEAATPAXXXXXXXXXXXXXXXXXXXTPSMTTTAPGPTATPSMTXXXXXXXXXXXPTPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTPVAPVAGATSNCENGYAGWQNNEACCSEFCGQCGGSGCGELGSATCCFDNIINAGKVCGVDVLEAPCIIINFTPAPLAEGETAAPLPAPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAETEXXXXXXXXATESPVSRGGVGTPTSSPGGSEAPQESVAXXXXXPVGGGVGTTPAPSTPECADGIEGFRHGVACCSVSCGQCGGTGCEYLEGGALECCSHDVLTTNSSCSETGE-APCVLGPVSEVDGAADADTT 426          
BLAST of mRNA_C-linearis_contig8.15703.1 vs. uniprot
Match: D7FJ68_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ68_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 3.580e-15
Identity = 130/436 (29.82%), Postives = 162/436 (37.16%), Query Frame = 0
Query:   54 CGGGIEGILSSDGTTCCLEACGLCGGSGCSDVEGTLDTD-CCVNDIKDTERTCGVGGVVAPCTIDPDNPLTTPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPPPGSISTCENGFPGFQTQEACCSEFCGSCGGSGC----GALGSADCCVDNIIEGDRVCDVNAFEAPCIIVSLTPSPLAAGQTRAPLMVATPAPFLGPVV---------PTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAATE------AXXXXXXXXXXXXXXXEVPVEPAQ---TPAPTVE---------------------------VCAEGLEGFRHGIVCCPLECGQCGGSGCDNLPGG--ATGCCSDAILFEGVRCNGAEVVAPCII 437
            C  GI GI S  G +CCL  CG CGGS C++    L  D CC ++I++    C +  + APC +D   P  +P      XXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                          TC NG PG Q+  ACC   CG+CGGS C    G LG+ +CCV +I+E    C + A EAPC I    P+P       A                        PT +                             V   +                      E P   A    TPAP  E                           VC+ G+ G + G+ CC  +CG+CGGS CD   GG  A  CC   I   G  C+  ++ APC++
Sbjct: 1165 CSNGIPGIQS--GVSCCLAECGECGGSDCAEYGDGLGADNCCQSNIEEYGELCSIK-LEAPCVVDDSAPAPSPVTMPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------------------------------TDTCSNGIPGIQSDNACCLAECGACGGSDCDEFGGGLGADNCCVSDIVEHGEPCSI-ALEAPCYIDDSAPAPSPVAMPTAXXXXXXXXXXXXXXXXXXXXXXTEPTCSTGIPGIESSDGAVCCPTGCTMCGGSGCSTVGMPDYGPESCCSSDILSTGASCSETGEAPCVLADVVLTPAPVAEPTXXXXXXXXXXXXXXXXXXXXXXXTDVCSNGIPGIQSGVSCCLADCGECGGSDCDEFGGGLGADNCCESDIEEYGELCS-IKLEAPCVV 1539          
BLAST of mRNA_C-linearis_contig8.15703.1 vs. uniprot
Match: A0A6H5JZG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZG5_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 2.930e-9
Identity = 71/234 (30.34%), Postives = 80/234 (34.19%), Query Frame = 0
Query:  219 TCENGFPGFQ-TQEACCSEFCGSCGGSGCGALGSAD------CCVDNIIEGDRVCDVNAFEAPCIIVSLTPSPLAAGQTRAPLMVATPAPFLGPVVPTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAATEAXXXXXXXXXXXXXXXEVPVEPAQTPAPTVEVCAEGLEGFR-HGIVCCPLECGQCGGSGCDNLPGGATG-----CCSDAILFEGVRCNGAEVVAPCIIGS 439
            TC NG  G   +   CCS  CG CGG GC   GSA+      CC   I   D  CD    EAPCII          G      M+  P+                                        V   +A                           +VE C+ GLEG    G VCCPL+CGQCGG GC    G A G     CCS  I      C+     APCIIGS
Sbjct:  240 TCSNGLEGIDGSGGVCCSLDCGQCGGKGCYTSGSANGLGGDFCCSGGIKASDEYCD-ETNEAPCII----------GSRPGAKMIHVPS---------------------------------LHVIYDRVTHKQACLANVYLFFLGQ---------------SVETCSNGLEGIDGSGGVCCPLDCGQCGGKGC-YTSGSANGLGGDFCCSGGIKASDEYCDETNE-APCIIGS 412          
BLAST of mRNA_C-linearis_contig8.15703.1 vs. uniprot
Match: A0A6H5JC43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC43_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 2.530e-8
Identity = 39/77 (50.65%), Postives = 46/77 (59.74%), Query Frame = 0
Query:  370 TPAPT-VEVCAEGLEGFR-HGIVCCPLECGQCGGSGCDNLPGGATG-----CCSDAILFEGVRCNGAEVVAPCIIGS 439
            TP+PT    C+ GLEG   +G+VCCPL CGQCGG+GC N  G A G     CC  +I   G  C+     APCIIGS
Sbjct:  261 TPSPTSANTCSNGLEGIDGNGVVCCPLGCGQCGGTGC-NTSGAAAGLDGSSCCGGSIKASGKYCDETND-APCIIGS 335          
BLAST of mRNA_C-linearis_contig8.15703.1 vs. uniprot
Match: D7FQV4_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV4_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 2.780e-8
Identity = 36/71 (50.70%), Postives = 42/71 (59.15%), Query Frame = 0
Query:  375 VEVCAEGLEGFR-HGIVCCPLECGQCGGSGCDNLPGGATG-----CCSDAILFEGVRCNGAEVVAPCIIGS 439
            VE C+ GLEG   +G+VCCPLEC QCGG+GC  + G A G     CC   I   G  C+     APCIIGS
Sbjct:  469 VETCSNGLEGIEGNGVVCCPLECNQCGGTGC-TMSGSAAGLGSESCCGGGIKASGAYCDDTNE-APCIIGS 537          
BLAST of mRNA_C-linearis_contig8.15703.1 vs. uniprot
Match: A0A6H5JGP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGP9_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 6.690e-8
Identity = 34/71 (47.89%), Postives = 43/71 (60.56%), Query Frame = 0
Query:  378 CAEGLEGFR-HGIVCCPLECGQCGGSGCDNLPGGATG-----CCSDAILFEGVRCNGAEVVAPCIIGSVDD 442
            C+ G+EG   +G+VCCPLECGQCGG+GC +  G A+G     CC   +   G  C+     APCI GS DD
Sbjct:  119 CSGGIEGIDGNGVVCCPLECGQCGGTGCSSA-GAASGLGSESCCESGVDSSGRYCD-VTGEAPCIYGSPDD 187          
BLAST of mRNA_C-linearis_contig8.15703.1 vs. uniprot
Match: D7FN04_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN04_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 2.670e-7
Identity = 31/69 (44.93%), Postives = 38/69 (55.07%), Query Frame = 0
Query:  378 CAEGLEGFRHGIVCCPLECGQCGGSGCDNLPG----GATGCCSDAILFEGVRCNGAEVVAPCIIGSVDD 442
            C +G+EG    +VCCPLECGQCGG+GC         GA  CC + +   G  C+     APCI GS  D
Sbjct:  317 CRDGIEGIDGRVVCCPLECGQCGGTGCSTSGAAYGLGADSCCREPVSSSGKYCDDTGE-APCIYGSAPD 384          
BLAST of mRNA_C-linearis_contig8.15703.1 vs. uniprot
Match: D7FN07_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN07_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 2.940e-7
Identity = 31/69 (44.93%), Postives = 38/69 (55.07%), Query Frame = 0
Query:  378 CAEGLEGFRHGIVCCPLECGQCGGSGCDNLPG----GATGCCSDAILFEGVRCNGAEVVAPCIIGSVDD 442
            C +G+EG    +VCCPLECGQCGG+GC         GA  CC + +   G  C+     APCI GS  D
Sbjct:  339 CRDGIEGIDGRVVCCPLECGQCGGTGCSTSGAAYGLGADSCCREPVSSSGKYCDDTGE-APCIYGSAPD 406          
BLAST of mRNA_C-linearis_contig8.15703.1 vs. uniprot
Match: A0A835YLW4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLW4_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 5.710e-7
Identity = 29/60 (48.33%), Postives = 34/60 (56.67%), Query Frame = 0
Query:  378 CAEGLEGFRHG--IVCCPLECGQCGGSGCDNLPGGATGCCSDAILFEGVRCNGAEVVAPC 435
            C   L G   G   VCCP  CG+CGG+GC N PGGA+ CC+  I    + C G  V APC
Sbjct:   77 CGMDLSGILSGDKSVCCPARCGKCGGTGCQNFPGGASQCCTTNIQATDLLCAGTAVPAPC 136          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15703.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A6H5JJ70_9PHAE2.820e-6752.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8G7_ECTSI1.190e-5352.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FJ68_ECTSI3.580e-1529.82WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JZG5_9PHAE2.930e-930.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JC43_9PHAE2.530e-850.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQV4_ECTSI2.780e-850.70Unsaturated glucuronyl hydrolase, family GH88 n=1 ... [more]
A0A6H5JGP9_9PHAE6.690e-847.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FN04_ECTSI2.670e-744.93FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D7FN07_ECTSI2.940e-744.93FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A835YLW4_9STRA5.710e-748.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 305..317
score: 52.31
coord: 151..172
score: 31.82
coord: 197..214
score: 28.89
coord: 113..129
score: 47.06
coord: 175..191
score: 34.12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 33..43
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 51..460
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..50
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 44..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:2699739..2706629 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15703.1mRNA_C-linearis_contig8.15703.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 2699739..2706700 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15703.1 ID=prot_C-linearis_contig8.15703.1|Name=mRNA_C-linearis_contig8.15703.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=460bp
MIMDGPSTRRYRSGRARASGVGMTKTTTRLRRLVLVLVVAVAWRPSTLLA
QAECGGGIEGILSSDGTTCCLEACGLCGGSGCSDVEGTLDTDCCVNDIKD
TERTCGVGGVVAPCTIDPDNPLTTPAPTAATAEPTVEAQATAAPVAATVA
PVVAPTTAPVAAPTAAPVAPPVAPPVAAPTAAPVAPPVAPPVAVVVQTTA
PVQAPIVDPDVPPPGSISTCENGFPGFQTQEACCSEFCGSCGGSGCGALG
SADCCVDNIIEGDRVCDVNAFEAPCIIVSLTPSPLAAGQTRAPLMVATPA
PFLGPVVPTPAPVPPVAAPVAAPVAAPVAAPVAAPVAAPAVAATEAPVSR
EIEAPTAAPEAEVPVEPAQTPAPTVEVCAEGLEGFRHGIVCCPLECGQCG
GSGCDNLPGGATGCCSDAILFEGVRCNGAEVVAPCIIGSVDDVVGAANAE
TSAACNVWIG
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