prot_C-linearis_contig8.15685.1 (polypeptide) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig8.15685.1 vs. uniprot
Match: D8LLV6_ECTSI (tRNA-intron lyase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLV6_ECTSI) HSP 1 Score: 292 bits (747), Expect = 4.420e-93 Identity = 190/354 (53.67%), Postives = 214/354 (60.45%), Query Frame = 0
Query: 1 MVALRALLLGDIATLQFPASSCG--HRGDDELEGR-KGLGYMLKQSFGKVSEVHSHHGVEPPASSQQ--------PAAVTNSGLRCLQLSLEEAFYLAHVDECLALAV--RPLVFPTSGATALPTPPRRKRRLG---DEHPHLLH--HHPGHHQGGADVAADGSTARRQDFGAGVGFVGSGGSGRKDAEVLDADTAPLLSSEEAWQYCCDRRPDFPAMFAVYRHFRARRYTVHTGHKYGAHFVLYEGPPDDCHSRYCVHVARGGG-GDSWGHMKTVTRLMPASLICHLLAHIAPYFDVAKCLLVCGVSYRTSRQPSSP--EPPSSSPLDTASLAALEVAEVNALRFSRSRESDG 333
MV LRALLLGD+A L FP C HR D +G KG+GY+L++SFGKVSE S + P SS PAA +SGLRCLQLSLEEAFYLAHVDE LALAV LV PT+ ALP +E P LLH H S + + FG G G PLLS+EEAW+YCC+RRPDFPAMFAVYRHFR R +TV TGHKYGAH+VLYEGPPD+CHSRYCVHV GGG GDSW H+KT+TRLMP DVAK LLVCGV+YR P P E S P+DT+SLAAL AEV ALRFSRSR+SDG
Sbjct: 1 MVLLRALLLGDVAKLVFPTHRCEERHREDRRHDGDGKGIGYILERSFGKVSEACSQREL-PSISSXXXXXXXXXXPAATIDSGLRCLQLSLEEAFYLAHVDESLALAVPRANLVVPTA-PIALPXXXXXXXXXXXXXEEPPGLLHDWHXXXXXXXXXXXXXXXSLSGEEAFGCGFGXX-------XXXXXXXXXXXPLLSAEEAWRYCCNRRPDFPAMFAVYRHFRIRSFTVDTGHKYGAHYVLYEGPPDECHSRYCVHVTGGGGRGDSWSHVKTMTRLMP---------------DVAKSLLVCGVTYR----PQGPTLETGLSPPIDTSSLAALAAAEVTALRFSRSRDSDG 326
BLAST of mRNA_C-linearis_contig8.15685.1 vs. uniprot
Match: A0A2R5LL66_9ACAR (tRNA-intron lyase (Fragment) n=1 Tax=Ornithodoros turicata TaxID=34597 RepID=A0A2R5LL66_9ACAR) HSP 1 Score: 61.6 bits (148), Expect = 6.060e-7 Identity = 36/105 (34.29%), Postives = 50/105 (47.62%), Query Frame = 0
Query: 185 EAWQYCCDRRPDFPAMFAVYRHFRARRYTVHTGHKYGAHFVLYEGPPDDCHSRYCVHVARGGGGD----------SWGHMKTVTRLMPASLICHLLAHIAPYFDV 279
E WQ C RP+FPA + VY HFR + + V TG KYG ++LY+ P H+ + V V G + SW + + RL S LL ++ DV
Sbjct: 177 ELWQRLCTLRPNFPARYTVYHHFRTKGWVVRTGSKYGTDYLLYKDGPPFYHATFSVLVRSTQGAELREVQDCRFRSWTSLSGLVRLNFNSTKTVLLCYVILPSDV 281
BLAST of mRNA_C-linearis_contig8.15685.1 vs. uniprot
Match: A0A0W7TI51_9ARCH (Endonuclease n=1 Tax=Candidatus Methanomethylophilus sp. 1R26 TaxID=1769296 RepID=A0A0W7TI51_9ARCH) HSP 1 Score: 58.5 bits (140), Expect = 8.480e-6 Identity = 31/93 (33.33%), Postives = 42/93 (45.16%), Query Frame = 0
Query: 168 KDAEVLDADTAPLLSSEEAWQYCCDRRPDFPAMFAVYRHFRARRYTVHTGHKYGAHFVLYEGPPDDCHSRYCVHVARGGGGDSWGHMKTVTRL 260
+ EVL AD + + + +F Y R+R V TG KYG HF +YEG PD+CH+RY VH + W + RL
Sbjct: 237 RKGEVLSADDIKSIGRKS--------QNEFGLRLRAYEDLRSRGLIVKTGFKYGTHFRVYEGSPDECHARYLVHAFQDSKVAMWPEISRTVRL 321
BLAST of mRNA_C-linearis_contig8.15685.1 vs. uniprot
Match: M4YIW8_THEXX (tRNA intron endonuclease n=1 Tax=Thermoplasmatales archaeon (strain BRNA1) TaxID=1054217 RepID=M4YIW8_THEXX) HSP 1 Score: 58.2 bits (139), Expect = 9.110e-6 Identity = 27/65 (41.54%), Postives = 32/65 (49.23%), Query Frame = 0
Query: 196 DFPAMFAVYRHFRARRYTVHTGHKYGAHFVLYEGPPDDCHSRYCVHVARGGGGDSWGHMKTVTRL 260
+F Y RAR V TG KYG HF +YEG PD+CH+RY VH W + RL
Sbjct: 258 EFDLRLKAYYDLRARGLVVKTGFKYGTHFRVYEGSPDECHARYLVHAVTASKIAMWPEISRTVRL 322
BLAST of mRNA_C-linearis_contig8.15685.1 vs. uniprot
Match: A0A482UN53_9ARCH (tRNA_int_endo domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UN53_9ARCH) HSP 1 Score: 57.8 bits (138), Expect = 1.360e-5 Identity = 27/74 (36.49%), Postives = 40/74 (54.05%), Query Frame = 0
Query: 169 DAEVLDADTAPLLSSEEAWQYCCDRRPDFPAMFAVYRHFRARRYTVHTGHKYGAHFVLYEGPPDDCHSRYCVHV 242
D+ D T L++++ W C R +FPA +AVYRH+R + V G +G FVLY P H+ +C+ V
Sbjct: 69 DSAASDDGTEHALTADQLWSIFCARIANFPARYAVYRHYRTAGWVVRDGLAFGCDFVLYAKGPGWDHAPHCITV 142 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15685.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 5
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig8.15685.1 ID=prot_C-linearis_contig8.15685.1|Name=mRNA_C-linearis_contig8.15685.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=369bpback to top |