prot_C-linearis_contig8.15684.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15684.1
Unique Nameprot_C-linearis_contig8.15684.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length747
Homology
BLAST of mRNA_C-linearis_contig8.15684.1 vs. uniprot
Match: D8LLV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLV7_ECTSI)

HSP 1 Score: 426 bits (1094), Expect = 4.120e-135
Identity = 364/664 (54.82%), Postives = 408/664 (61.45%), Query Frame = 0
Query:  109 SGTASRTICLRTLRGSTSSGALSRLAGWGGTLAAAPAXXXXXXXVAGAMEHGAPPEAAPGQTGAVAVA--VGAGGGLGVLPSASKVVDLREVKKVKPGPLASAAXXXXXXXEDSDGPEEGEG-PVKIDISAGKRMIEFQLKQNAAEEKRESARLKSERERADAAAAEGSQRMLAQVNARIEAQRRVGG-----GVLGSWGS--ESAADHDGGXXXGNAVHLIGPSQMRNLAEKHGIVVTFVDDGAASGVAQVRA-LARAHGIRIQVWGQDGDGDEAPLGGDCVGKATTPPPILSSLRARRTAPARRSPSPVPEALVKAPPRKTPAAPA--GGMFSGPARMMRRALEASGGCVPSAKDASPKSGGGG--AASPRSKALCVVPACLPPSLELCFLVSCSVPERRLGSAVHSWRIVLSGGRGTRSGRGGGVARPRPG----SGGSAGSVGAASNGAAKGGVVVGPDSRDARSEGEGCSSKGXXXXXXXXXXXXXXXXXXNTPMVS-----GRKRREAPGDTDQAGEKERRGGHAEGTTS--KRAVGEGDVDGGGGSXXXAVGGRKEGRLGHRNAGPAA---GEGGATPSTRGSKEA-TTPRIQNGVPKRMRLVAPGGAVVSQAADTPSTHKSGRRTGSGGAAFGPGNNNLFKGAMAGIMGRGKRPAP 742
            S  ASRTICLR L G+   G L  LAGWGG   AA  XXXXXXX            A  GQ  AV V   VG GGGLGVLPSA+KVVDLREVKKVKPGPLA++A       +DS+G EEG G PVKIDISAGKRMIEFQLKQNAAEEKRE+AR+K+E+ RADAA AEGSQRMLAQVNAR+EAQRR  G     GVLGSWG+  E+AA  D        VH I  SQ+RNLAEKHGIVV FVDDGAASGV+Q     +  HG   +     G        G   G + TPPP LSSLR +  APARRSPSP P    KA PRK  A PA  GG+FSGPARMMRRALEASGGCVPS KD SP +  GG  A++P            PP  +   +++ +     +G+   + R V SGG  + SG+G G  RPRPG    S  S G+  AASN A KG V  GP SR ARS GE             XXXXXXXXXXX  P  S     GRKRR   G                      KRAV     +GGGGS     GGR EGRLGHR  GP+    GEG A  S R S EA  TP +Q+  PKRMRLVAP G VVSQA+ TP+T KSGRR  +GGA +G GNNNLFKGAMAGI+GRGKRP+P
Sbjct:  104 SDAASRTICLRLLPGTKPIGPLPSLAGWGGVTKAAXXXXXXXXXXXXXXXXXXXXXAVSGQADAVLVGEKVG-GGGLGVLPSANKVVDLREVKKVKPGPLAASAPVP----DDSEGEEEGAGGPVKIDISAGKRMIEFQLKQNAAEEKREAARVKNEKGRADAAIAEGSQRMLAQVNARMEAQRRGRGXXXXSGVLGSWGATEENAARQD----DSTTVHAIDQSQIRNLAEKHGIVVRFVDDGAASGVSQDGGGCSDGHGEEDEALAAGGSR------GAARGASATPPPTLSSLRTQ-AAPARRSPSPTPPVPAKALPRKPSAVPAAAGGIFSGPARMMRRALEASGGCVPSGKDVSPVADRGGDRASAPPGDNQ---GGSAPPVADARKVLAPTAGAALVGNGQRA-RGVASGGNDSMSGKGDGAIRPRPGCAESSACSVGAATAASN-AVKGIVAPGPASRAARSHGESSRRSEGGSRVGAXXXXXXXXXXXXAPDSSAGKLVGRKRRATMGXXXXXXXXXXXXXXXXXXXXXRKRAV-----EGGGGSGRVGGGGRMEGRLGHRGVGPSGEEDGEGAAAVSARTSPEAMATPTVQSSAPKRMRLVAPSGVVVSQASATPTT-KSGRRASTGGAGWGAGNNNLFKGAMAGIIGRGKRPSP 740          
BLAST of mRNA_C-linearis_contig8.15684.1 vs. uniprot
Match: A0A6H5J7E3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7E3_9PHAE)

HSP 1 Score: 348 bits (893), Expect = 2.130e-105
Identity = 342/658 (51.98%), Postives = 384/658 (58.36%), Query Frame = 0
Query:  112 ASRTICLRTLRGSTSSGALSRLAGWGG-TLAAAPAXXXXXXXVAGAMEHGAPPEAAPGQTGAVAVAVG---AGGGLGVLPSASKVVDLREVKKVKPGPLASAAXXXXXXXEDSDGPEEGEG-PVKIDISAGKRMIEFQLKQNAAEEKRESARLKSERERADAAAAEGSQRMLAQVNARIEAQRRV---GGGVLGSWGSES---AADHDGGXXXGNAVHLIGPSQMRNLAEKHGIVVTFVDDGAASGVAQVRALARAHGIRIQVWGQDGDGDE------------APLGGDCVGKATTPPPILSSLRARRTAPARRSPSPVPEALVKAPPRKTPAAP--AGGMFSGPARMMRRALEASGGCVPSAKDASPKSG-GGGAASPRSKALCVVPACLPPSLELCFLVSCSVPERRLGSAVHSWRIVLSGGRGTRSGRGGGVARPRPG---SGG-SAGSVGAASNGAAKGGVVVGPDSRDARSEGEGCSSKGXXXXXXXXXXXXXXXXXXNTPMVSGRKRREAPGDTDQAGEK--------------ERRGGHAEGTTSKRAVGEGDVDGGGGSXXXAVGGRKEGRLGHRNAGPAAGE---GGATPSTRGSKEA-TTPRIQNGVPKRMRLVAPGGAVVSQAADTPSTHKSGRRTGSGGAAFGPG 721
            ASRTICLR L  +     LS LAGWGG T A    XXXXXXX           E A     A AV VG    GGGLGVLPSA+KVVDLREVKKVKPGPLA++A       +DS+G EEG G PVKIDISAGKRMIEFQLKQNAAEEKRE+AR+K+E+  ADAA AEGSQRMLAQVNAR+EAQRR    G GVLGSWG+      + HD        VH I  SQ+RNLAEKHGIVV FVDDGAASGV+QVRALARAHGIRI V G+DG G                               LSSLR +  APARRS SP P    KAPPRK    P  AGG+FSGPARMMRRALEASGGCVPSAKD SP +  GG  ASP         A  PP+ +   +++ +     +G+   + R V SGG  + SG+GGG  RPRP    SG  S G+  AASNG  +G VV GP SR ARS GE      XXXXXXXXXXXXXXXXXX                                     E +G H                     XXX   GR EGRLG+R  GP+  E   G    S R S EA  TP +Q+  PKRMRLVAP G VVSQA+ TP+T KSGRR+ +GGA +G G
Sbjct:  103 ASRTICLRPLPETKPIRPLSSLAGWGGVTKAXXXXXXXXXXXXXXXXXXXXXXEVAAVNGQADAVLVGEKVGGGGLGVLPSANKVVDLREVKKVKPGPLAASAPVP----DDSEGEEEGAGGPVKIDISAGKRMIEFQLKQNAAEEKREAARVKNEKGMADAAIAEGSQRMLAQVNARMEAQRRGRGGGSGVLGSWGATEENVTSQHDS-----TTVHAIDQSQIRNLAEKHGIVVRFVDDGAASGVSQVRALARAHGIRILVVGEDGGGSSDGRVEXXXXXXXXXXXXXXXXXXXXXXXTLSSLRTQ-AAPARRSRSPTPPLPTKAPPRKPSVVPPAAGGIFSGPARMMRRALEASGGCVPSAKDVSPVADRGGNRASPPPGDNQGGSA--PPAADARTVLAPTAGAALVGNGQPA-RGVASGGDDSMSGKGGGAGRPRPSCAESGACSVGAAAAASNGV-RGIVVPGPASRAARSHGESSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEGKGAHDXXXXXXXXXXXXXXX----XXXXXXXGRMEGRLGYRGVGPSEEEEEEGAEAVSARTSPEAMATPTVQSSAPKRMRLVAPSGVVVSQASATPTT-KSGRRSSTGGAGWGAG 741          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15684.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLV7_ECTSI4.120e-13554.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J7E3_9PHAE2.130e-10551.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 249..269

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:2565957..2571738 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15684.1mRNA_C-linearis_contig8.15684.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 2565186..2572502 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15684.1 ID=prot_C-linearis_contig8.15684.1|Name=mRNA_C-linearis_contig8.15684.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=747bp
MTQDVAEPAPSPAAEEAEEAVPETADGAEETQQAAVTPEANPYPDPAPES
PVGHPVSPPSPVAAPPAPTPTPTLSPREGKAADVPGAAADLSAAARLASA
SALASVSASGTASRTICLRTLRGSTSSGALSRLAGWGGTLAAAPAAAAAA
AGVAGAMEHGAPPEAAPGQTGAVAVAVGAGGGLGVLPSASKVVDLREVKK
VKPGPLASAAAAAPVPAEDSDGPEEGEGPVKIDISAGKRMIEFQLKQNAA
EEKRESARLKSERERADAAAAEGSQRMLAQVNARIEAQRRVGGGVLGSWG
SESAADHDGGGGGGNAVHLIGPSQMRNLAEKHGIVVTFVDDGAASGVAQV
RALARAHGIRIQVWGQDGDGDEAPLGGDCVGKATTPPPILSSLRARRTAP
ARRSPSPVPEALVKAPPRKTPAAPAGGMFSGPARMMRRALEASGGCVPSA
KDASPKSGGGGAASPRSKALCVVPACLPPSLELCFLVSCSVPERRLGSAV
HSWRIVLSGGRGTRSGRGGGVARPRPGSGGSAGSVGAASNGAAKGGVVVG
PDSRDARSEGEGCSSKGGSSDPAAAAAAAAAAPGGNTPMVSGRKRREAPG
DTDQAGEKERRGGHAEGTTSKRAVGEGDVDGGGGSGGGAVGGRKEGRLGH
RNAGPAAGEGGATPSTRGSKEATTPRIQNGVPKRMRLVAPGGAVVSQAAD
TPSTHKSGRRTGSGGAAFGPGNNNLFKGAMAGIMGRGKRPAPRVKS*
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