prot_C-linearis_contig8.15676.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15676.1
Unique Nameprot_C-linearis_contig8.15676.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length281
Homology
BLAST of mRNA_C-linearis_contig8.15676.1 vs. uniprot
Match: D7G2H0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2H0_ECTSI)

HSP 1 Score: 456 bits (1172), Expect = 4.290e-160
Identity = 227/309 (73.46%), Postives = 250/309 (80.91%), Query Frame = 0
Query:    1 MDTVVDFLTQKWDYGPEVCLAAFALFHSAR----------------------------VRKMEKDSGKHLFWAESLVMTYMMAFGGGILAPFLLGKPPVMFVNDLIVPMVAVCWFVSNRAEGSIFALINTPLMKQVILMLSEIFRANAMCGVVVLSNSVLKPGKHYPIALWGPILLGTIGGCGGLFLPLDKGLQASYPHEALSLGLKKGAPWPLQSAFYGSAFFNLFVYDPNVGPYLRDAAGFILEGDDLVVKGKALVAGFLCACAIAQTVMGESFNPFTPMHNAVYTVTGVPNPQATAVAA-EKPKED 280
            M+  VDFLTQ W+YG EVCLAAFALFHSAR                            VRK+EKDSGK +FWAESLVMTYMMAFGGGILAPFLLGKPPVMFVNDLIVP+VAVCWFVSNRAEG IFALINTP+MKQVIL+LSE+FRAN+MCG+VVLSNS+LKPGKHYPIALWGPILLGT+GGCGGLFLPLDKGL+          GLK GAPWPLQSAFYGS FFNLFVYDPNVGPYLRDAA   L+GD LVV+G+A+VAGFLC  A+AQT++  +FNPFTP+HN VYTVTGVPNP+A AVA  EKPK D
Sbjct:    1 MENAVDFLTQNWEYGAEVCLAAFALFHSAREIKQACDALRLACAGSGALTFKQKAKILVRKIEKDSGKQMFWAESLVMTYMMAFGGGILAPFLLGKPPVMFVNDLIVPLVAVCWFVSNRAEGPIFALINTPIMKQVILVLSEVFRANSMCGIVVLSNSILKPGKHYPIALWGPILLGTVGGCGGLFLPLDKGLK----------GLKNGAPWPLQSAFYGSMFFNLFVYDPNVGPYLRDAAALFLDGD-LVVQGRAIVAGFLCVVALAQTLISPAFNPFTPVHNVVYTVTGVPNPEAVAVATGEKPKAD 298          
BLAST of mRNA_C-linearis_contig8.15676.1 vs. uniprot
Match: A0A835Z0I7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0I7_9STRA)

HSP 1 Score: 249 bits (637), Expect = 5.520e-79
Identity = 126/274 (45.99%), Postives = 167/274 (60.95%), Query Frame = 0
Query:    1 MDTVVDFLTQKWDYGPEVCLAAFALFHSARVRKMEKDSGKHLFWAESLVMTYMMAFGGGILAPFLLGKPPVMFVNDLIVPMVAVCWFVSNRAEGSIFALINTPLMKQVILMLSEIFRANAMCGVVVLSNSVLKPGKHYPIALWGPILLGTIGGCGGLFLPLDKGLQASYPHEALSLGLKKGAPWPLQSAFYGSAFFNLFVYDPNVGPYLRDAAGFILEGDDLVVKGKALVAGFLCACAIAQTVMGESFNPFTPMHNAVYTVTGVPNPQATAVAA 274
            +DT  DFL Q   Y PEVCL  +AL  +ARV+       K+++WA+SLV+T++M FGGGI+APFLLGKPPV+ +NDL+V  V   W V NR E  + AL+  P++ Q +  ++E+FRAN  C +V ++   +  GK+YPI  WGP+LLGTI GC G+FLP DKGL +          +K G+PWPLQSAFYGS  F+L  +DP+V   L   AG     D      +A V  F  A A  QT  G  FNPF+P+H   Y ++GV  P A    A
Sbjct:    7 LDTAHDFLLQDLPYMPEVCLFIYALVGAARVKS---GPAKNMYWAQSLVLTFLMCFGGGIVAPFLLGKPPVILINDLLVVAVLGSWLVVNRLEEPVGALLRAPVISQALAFMAEVFRANGFCRMVQVAFKEIPAGKYYPIPFWGPVLLGTIAGCAGMFLPFDKGLAS----------IKGGSPWPLQSAFYGSLAFHLLAHDPHVRAALAPYAG-----DYTADAARACVVAFFAAVATLQTYAGPHFNPFSPLHRVAYAISGVKAPGANGAPA 262          
BLAST of mRNA_C-linearis_contig8.15676.1 vs. uniprot
Match: A0A4D9CX56_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CX56_9STRA)

HSP 1 Score: 159 bits (401), Expect = 7.710e-42
Identity = 94/265 (35.47%), Postives = 139/265 (52.45%), Query Frame = 0
Query:    7 FLTQKWDYGPEVCLAAFALFHSARVRKMEKDSGKHLFWAESLVMTYMMAFGGGILAPFLLGKPPVMFVNDLIVPMVAVCWFVSNRAEGSIFALINTPLMKQVILMLSEIFRANAMCGVVVLSNSVLKPGKHYPIALWGPILLGTIGGCGGLFLPLDKGLQASYPHEALSLGLKKGAPWPLQSAFYGSAFFNLFVYDPNV-GPYLRDAAGFILEGDDLVVKGKALVAGFLCACAIAQTVMGESFNPFTPMHNAVYTVTGVPNPQAT 270
            FL  ++ Y  EVCL AF L  S RVR   + S     W   LV+ ++  F GG + P   G+ PV+FVNDL+VP+V + W++ +     +  L+ T   K +++ L EI+RA ++   V  + + + PG +YPIA+ GP+L+GT+ G  G F+P D+G+            L  G P  LQ+      F++L  +DP + G YLR      L   + +   KAL   F  A A    V G  +NPFTP+H  +Y V G+P   AT
Sbjct:   21 FLLMQYPYEFEVCLFAFCLGASMRVRPSAQYS-----WLHHLVLVFLTGFAGGTIIPMFFGRTPVLFVNDLLVPLVCLSWYLVHYTR--VGGLLQTSPCKFLLVALFEIYRAASILKTVGQAATDIAPGPYYPIAVVGPVLVGTLSGSMGAFMPPDRGISF----------LATGVPLNLQTTLLACLFYHLAAHDPALPGAYLRGLPALRLSDPENL---KALTVFFFVAMAFLSLVKGPDYNPFTPVHTLLYQVLGIPYSPAT 265          
BLAST of mRNA_C-linearis_contig8.15676.1 vs. uniprot
Match: A0A6H5JUV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV5_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 3.460e-30
Identity = 88/276 (31.88%), Postives = 131/276 (47.46%), Query Frame = 0
Query:   11 KWDYGPEVCLAAFALFHSARVRKMEKDSGKHLFWAESLVMTYMMAFGGGILAPFLLGKPPVMFVNDLIVPMVAVCWFVSNRAEGSIFALINTPLMKQVILMLSEIFRANAMCGVVVLSNSVLKPGKHYPIALWGPILLGTIGGCGGLFLPLDKGLQASYPHEALSLGLKKGAPWPLQSAFYGSAFFNLFVYDPNV-GPYLRDAAGFILEG---DDLVVKGKALVAGFLCACAIAQTVMGESFNPFTPMHNA----VYTVTGVPNPQATAVAAEKPK 278
            KW Y  E  L  F+L  SA V+   K +          V T M   G G++ P L+  PP+   NDL+V  + V + VS   +  +   I TP + + + +LS   R N +C +V  + +   P  +YPIAL+GPI++G   G GG  +P DKGL +          + K  PW +Q  F  + F+++   D  + G  +R A G  LE    +D+    + +   F     + QT     FNPFTP H A    +Y VTG+P    TA+  E P+
Sbjct:   16 KWPYSSEFYL--FSLVTSACVKARGKSTKFEGLLLPMFVHTLMCTTGSGVVGPLLMRDPPLFLNNDLLVTCIMVFFLVSVVFDPYVVNFIKTPHLWKAMALLSTTSRMNKICFIVDYALTKFPPSPYYPIALFGPIMIGLARGIGGSLVPADKGLSS----------ISKDLPWAVQLCFSVATFYHIVANDTYILGGMVRGALG--LENATREDI----RLIAVTFGVVVTVIQTYYAPKFNPFTPAHQATSPALYAVTGMPK---TAITIEVPR 270          
BLAST of mRNA_C-linearis_contig8.15676.1 vs. uniprot
Match: A0A7R9U3G1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3G1_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.460e-25
Identity = 84/262 (32.06%), Postives = 122/262 (46.56%), Query Frame = 0
Query:    4 VVDFLTQKWDYGPEVCLAAFALFHSARVRKMEKDSGKHLFWAESLVMTYMMAFGGGILAPFLLGKPPVMFVNDLIVPMVAVCWFVSNRAEGSIFALINTPLMKQVILMLSEIFRANAMCGVVVLSNSVLKPGKHYPIALWGPILLGTIGGCGGLFLPLDKGLQASYPHEALSLGLKKGAPWPLQSAFYGSAFFNLFVYDPN--VGPYLRDAAGFILEGDDLVVKGKALVAGFLCACAIAQTVMGESFNPF-----TPMHNAV 258
            +V+ LT +      +C   F +F  AR     K       W ESL+ T++ AFGGG L P +LGKPPV   +D++  M  + W +++      +   N  L   + L    IF+A   C  V  +  VL     YPI L GPI+LG +G  GG+FLP DKGL A      +S GL      PL      SAFF++ V D +  +G  LR   G +     ++        G+     + + ++  SF+PF     T + NAV
Sbjct:   24 LVELLTLQDATAKLLCAFCF-IFMGARAAAKAKSGS----WVESLIRTFLTAFGGGTLVPLILGKPPVFLDSDVLFCMTLLAWALTHLTPVGRWVEYNQALRLPLNLG-GYIFKAVKCCSTVNTAAKVLSASALYPIPLMGPIVLGVLGSTGGMFLPFDKGLAA------VSKGLSVAFEIPLAC----SAFFHIIVNDQSGFLGTTLRQLTGPVTNETAVLAA-----VGWFAGTYLTKELLDSSFDPFEASGYTYLFNAV 264          
BLAST of mRNA_C-linearis_contig8.15676.1 vs. uniprot
Match: D7FML9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FML9_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 2.650e-24
Identity = 70/214 (32.71%), Postives = 107/214 (50.00%), Query Frame = 0
Query:   69 PPVMFVNDLIVPMVAVCWFVSNRAEGSIFALINTPLMKQVILMLSEIFRANAMCGVVVLSNSVLKPGKHYPIALWGPILLGTIGGCGGLFLPLDKGLQASYPHEALSLGLKKGAPWPLQSAFYGSAFFNLFVYDPNV-GPYLRDAAGFILEG---DDLVVKGKALVAGFLCACAIAQTVMGESFNPFTPMHNAVYTVTGVPNPQATAVAAEKPK 278
            PP+   NDL+V  + V +  S   +  +   I TP + + + +LS   R N +C +V  + +   P  +YPIAL+GPI++G   G GG  +P DKGL +          + K  PW +Q  F  + F+++   D  + G  +R A G  LE    +D+    + +   F     + QT     FNPFTP H A+YTVTG+P    TA+  E P+
Sbjct:    4 PPLFLNNDLLVTCIMVFFLFSVVFDPYVVNFIKTPHLWKAMALLSTTSRMNKICFIVDYALTKFPPSPYYPIALFGPIMIGLARGIGGSLVPADKGLSS----------ISKDLPWAVQLCFSVATFYHVVANDTYILGGMVRGALG--LENATREDI----RLIAVTFGVVVTVIQTYYAPKFNPFTPAHQALYTVTGMPK---TAITIEVPR 198          
BLAST of mRNA_C-linearis_contig8.15676.1 vs. uniprot
Match: A0A7S1BM49_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BM49_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 7.280e-17
Identity = 64/226 (28.32%), Postives = 102/226 (45.13%), Query Frame = 0
Query:   19 CLAAFALFHSARVRKMEKDSGKHLFWAESLVMTYMMAFGGGILAPFLLGKPPVMFVNDLIVPMVAVCWFVSNRAEGSIFALINTPLMKQVILMLSEIFRANAMCGVVVLSNSVLKPGKHYPIALWGPILLGTIGGCGGLFLPLDKGLQASYPHEALSLGLKKGAPWPLQSAFYGSAFFNLFVYDPNVGPYLRDAAGFILEGDDLVVKGKALVAGFLCACAIAQTVM 244
            CL A+A  H  +V K        +F   SL +      GGGIL P  L   PV   +D+ +  + + + + +R             ++ ++++L E  RA  +C     +   +      P  L+GPI+ GT+ GCGG F+PL KGL+ +          + G P P ++A  G+A ++LFV        L D  G I    D   KG+ LVA F  + ++   +M
Sbjct:   56 CLLAYAFVHGVKVFKSVNPKASPVFKLLSLTLA---CTGGGILVPIFLNSIPVPLASDVYIVAILISFALHSRFPILRELFSKNIALQLILIVLYETTRAGVVCKFTKKAGETIL-ASWLPYPLFGPIMCGTVSGCGGAFMPLSKGLEPT----------RAGMPKPAKTALIGAAAYHLFV-----NTKLTD--GVI----DAPQKGQVLVASFFISVSLVDLLM 256          
BLAST of mRNA_C-linearis_contig8.15676.1 vs. uniprot
Match: A0A1E7EP48_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EP48_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 4.440e-16
Identity = 69/222 (31.08%), Postives = 104/222 (46.85%), Query Frame = 0
Query:   18 VCLAAFALFHSARV-RKMEKDSG--KHLFWAESLVMTYMMAFGGGILAPFLLGKPPVMFVNDLIVPMVAVCWFVSNRAEGSIFALINTPLMKQVILMLSEIFRANAMCGVVVLSNSVLKPGKHYPIALWGPILLGTIGGCGGLFLPLDKGLQASYPHEALSLGLKKGAPWPLQSAFYGSAFFNLFVYDPNVG-----PYLRDAAGFILEGDDLVVKGKALVA 231
            +C+  +   H  +V +K++ +S   K  F A  L+   +   GGGIL P  L   PV    D   P+      + +R+  S  + I   LM    ++  E  R   +   V L+ S + P + +   ++GPI+ GTIGGCGG FLP DKGL            +K G P P+ +AF G+ FF+LF +    G     P++ D    +    D   KGK +VA
Sbjct:   54 MCMIGYTFLHGCKVFKKIDGNSSNEKKKFSAYKLITMILACTGGGILVPIFLNTIPVTIAIDAY-PIA----ILQSRSVVSHLSAITNALM----VVFYETIRTYVVTLFVGLAASTIAPSQ-FSFPVFGPIICGTIGGCGGAFLPFDKGLAP----------IKDGLPPPVFTAFTGATFFHLFTHYTKNGNDTGIPFVDDVLDQLQI--DAPKKGKVIVA 253          
BLAST of mRNA_C-linearis_contig8.15676.1 vs. uniprot
Match: A0A813H4M2_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813H4M2_POLGL)

HSP 1 Score: 86.3 bits (212), Expect = 6.660e-16
Identity = 58/198 (29.29%), Postives = 97/198 (48.99%), Query Frame = 0
Query:    8 LTQKWDYGPEVCLAAFALFHSARVRKMEKDSGKHLFWAESLVMTYMMAFGGGILAPFLLGKPPVMFVNDLIVPMVAVCWFVSNRA---EGSIFALINTPLMKQVILMLSEIFRANAMCGVVVLS------NSVLKPGKHYPIALWGPILLGTIGGCGGLFLPLDKGLQASYPHEALSLGLKKGAPWPLQSAFYGSAFF 196
            LT K  +  EV +  + L  +  VR+  +      +WA+SLV+T + AFGGG LAP ++G  P     +         W+V++       S   L  T  M+ ++ +L  IF+   + G++ LS       +++   +++      P+L G +GGCGG FLPL KGL          L +++G  WP+ +AF  + F+
Sbjct:   69 LTDKAPWAWEVVVLGYMLKCAHDVREQVEG----FYWAKSLVVTGIAAFGGGFLAPAIVGHCPPPLREETFFWACVFSWYVTHYVPYVSASWKDLSRTRAMQLLLTVLFGIFKTQQIVGLIELSAKAIAEENLIPQSRYFSQPCAAPLLCGFLGGCGGAFLPLSKGL----------LPIEQGKQWPVSAAFLATVFY 252          
BLAST of mRNA_C-linearis_contig8.15676.1 vs. uniprot
Match: A0A448Z417_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z417_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.900e-15
Identity = 57/183 (31.15%), Postives = 81/183 (44.26%), Query Frame = 0
Query:   18 VCLAAFALFHSARVRKMEKDSGKHLFWAESLVMTYMMAFGGGILAPFLLGKPPVMFVNDLIVPMVAVCWFVSNRAEGSIFALINTPLMKQVILMLSEIFRANAMCGVVVLSNSVLKPGKHYPIALWGPILLGTIGGCGGLFLPLDKGLQASYPHEALSLGLKKGAPWPLQSAFYGSAFFNLFV 200
            +C+  +   H  +V K  K      +    LV   M   GGGIL P  L   PV    D     + + + +          L  + + K V+++  E  RA  +     L+ S +     +   ++GPI+ GTIGGCGG FLPLDKGL            L  G P P+ SAF G+ FF+LF 
Sbjct:   45 MCMIGYTFLHGCKVFKKFKPDAPFSY---KLVNLAMACTGGGILVPIFLNTVPVTLSIDAYPIAIMISYLLHTYIPSLREVLELSGIFKAVVILFYESIRAYVVTLFTGLAASTIA-ASQFSFPVFGPIICGTIGGCGGAFLPLDKGLAP----------LHDGLPAPVFSAFVGATFFHLFT 213          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15676.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2H0_ECTSI4.290e-16073.46Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z0I7_9STRA5.520e-7945.99Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9CX56_9STRA7.710e-4235.47Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A6H5JUV5_9PHAE3.460e-3031.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7R9U3G1_9STRA1.460e-2532.06Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
D7FML9_ECTSI2.650e-2432.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1BM49_9STRA7.280e-1728.32Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A1E7EP48_9STRA4.440e-1631.08Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A813H4M2_POLGL6.660e-1629.29Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A448Z417_9STRA1.900e-1531.15Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007866TRIC channelPFAMPF05197TRICcoord: 51..159
e-value: 1.1E-6
score: 28.3
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 140..161
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 129..139
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 89..107
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..41
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..65
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 66..70
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 108..128
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 71..88
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 162..280
NoneNo IPR availableTMHMMTMhelixcoord: 139..161
NoneNo IPR availableTMHMMTMhelixcoord: 42..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:2500914..2504679 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15676.1mRNA_C-linearis_contig8.15676.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 2500893..2505603 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15676.1 ID=prot_C-linearis_contig8.15676.1|Name=mRNA_C-linearis_contig8.15676.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=281bp
MDTVVDFLTQKWDYGPEVCLAAFALFHSARVRKMEKDSGKHLFWAESLVM
TYMMAFGGGILAPFLLGKPPVMFVNDLIVPMVAVCWFVSNRAEGSIFALI
NTPLMKQVILMLSEIFRANAMCGVVVLSNSVLKPGKHYPIALWGPILLGT
IGGCGGLFLPLDKGLQASYPHEALSLGLKKGAPWPLQSAFYGSAFFNLFV
YDPNVGPYLRDAAGFILEGDDLVVKGKALVAGFLCACAIAQTVMGESFNP
FTPMHNAVYTVTGVPNPQATAVAAEKPKED*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007866TRIC_channel