prot_C-linearis_contig8.15659.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15659.1
Unique Nameprot_C-linearis_contig8.15659.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length204
Homology
BLAST of mRNA_C-linearis_contig8.15659.1 vs. uniprot
Match: D8LI97_ECTSI (Transmembrane protein 18 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI97_ECTSI)

HSP 1 Score: 312 bits (799), Expect = 4.440e-106
Identity = 167/204 (81.86%), Postives = 182/204 (89.22%), Query Frame = 0
Query:    1 MASAAEDGVDQA-AESLGGGVIAERLEQHGEAFTGFLGDVQATLLSQLNTQSVGPEGFVENFQAFRSAVDWSETWIQGVLVFHLSLWLFFIITRKSFGAQVGLFTVILGGTRSSEFINTFLRDRWQEFSRQNYFDENGIFMGVMWAGPLLLLGFTMLVNLLCQAASLLVTVKTQQFKREIAAKKEAGKSKAKRGSKDKKAMKQA 203
            MA+ AE  VDQA AE LG   +AE+ EQHG+AFTGFLGDVQA LLSQLN  SVGPEGFVENFQAFRSAVDWSE WIQG+LVFHL LW+FFI+TR+SFGAQVGLF V+L GTR SEFINT LRDRWQ FSRQNYFDE+GIFMGVMWAGPLL+LGFTMLV+LLCQ ASLLVTVKT+QFKREIAAKK+ GKSKAKRG+KDKKA KQA
Sbjct:    1 MATVAEK-VDQAIAEGLGEEALAEKFEQHGDAFTGFLGDVQANLLSQLNAHSVGPEGFVENFQAFRSAVDWSEPWIQGILVFHLLLWVFFIVTRRSFGAQVGLFAVVLTGTRLSEFINTCLRDRWQNFSRQNYFDEHGIFMGVMWAGPLLILGFTMLVSLLCQTASLLVTVKTKQFKREIAAKKDGGKSKAKRGAKDKKASKQA 203          
BLAST of mRNA_C-linearis_contig8.15659.1 vs. uniprot
Match: A0A835ZFQ2_9STRA (Transmembrane protein 18 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFQ2_9STRA)

HSP 1 Score: 136 bits (343), Expect = 1.940e-37
Identity = 69/149 (46.31%), Postives = 100/149 (67.11%), Query Frame = 0
Query:   35 FLGDVQATLLSQLNTQSVGPEGFVENFQAFRSAVDWSETWIQGVLVFHLSLWLFFIITRKSFGAQVGLFTVILGGTRSSEFINTFLRDRWQEFSRQNYFDENGIFMGVMWAGPLLLLGFTMLVNLLCQAASLLVTVKTQQFKREIAAKK 183
            F+  ++A +L Q      GP+GF+EN QAF +AVDWSETWIQ +L FH+++    +++R     Q+ LF  I    R +E+ N +   RW++F+RQNYFDE G+F+GV+W  PLLL+   ML+  + ++A LLVTVK  Q +REIAA+K
Sbjct:   12 FIASLEANML-QAAKSGPGPQGFIENCQAFCAAVDWSETWIQAILCFHVAVAAAALLSRNRLNCQIALFLSICALVRGAEWANAYAARRWRDFARQNYFDERGVFVGVVWCAPLLLVLLGMLLGFVVRSARLLVTVKRAQLRREIAARK 159          
BLAST of mRNA_C-linearis_contig8.15659.1 vs. uniprot
Match: A0A7S2Y0G5_9STRA (Transmembrane protein 18 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0G5_9STRA)

HSP 1 Score: 137 bits (344), Expect = 7.620e-37
Identity = 69/150 (46.00%), Postives = 99/150 (66.00%), Query Frame = 0
Query:   36 LGDVQATLLSQLNTQSVGPEGFVENFQAFRSAVDWSETWIQGVLVFHLSLWLFFIITRKSFGAQVGLFTVILGGTRSSEFINTFLRDRWQEFSRQNYFDENGIFMGVMWAGPLLLLGFTMLVNLLCQAASLLVTVKTQQFKREIAAKKEA 185
            +  ++  +L        GPEGF EN +AF++AV+W E WIQG+L FH+ +++  ++ RK+F  QV +F +I+G    SE INT  ++ WQEFS Q+YFD NG+FM VM+AGPLLL+GF  L N L  +A LLV VK  + K+ +  K +A
Sbjct:   53 IASLEDQVLQMARESGAGPEGFWENVEAFKAAVNWEERWIQGILAFHVIVFVLMLVFRKNFNVQVCIFLLIVGLVSCSETINTLGQNHWQEFSTQDYFDPNGLFMMVMFAGPLLLIGFLQLFNFLLISADLLVKVKRAELKKHMREKNDA 202          
BLAST of mRNA_C-linearis_contig8.15659.1 vs. uniprot
Match: A0A7S4A3H0_9STRA (Transmembrane protein 18 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A3H0_9STRA)

HSP 1 Score: 122 bits (307), Expect = 2.080e-31
Identity = 66/143 (46.15%), Postives = 88/143 (61.54%), Query Frame = 0
Query:   36 LGDVQATLLSQLNTQSV--GPEGFVENFQAFRSAVDWSETWIQGVLVFHLSLWLFFIITRKSFGAQVGLFTVILGGTRSSEFINTFLRDRWQEFSRQNYFDENGIFMGVMWAGPLLLLGFTMLVNLLCQAASLLVTVKTQQFK 176
            L DV   L  Q+    V   P+ F E   AF +AVDW E WI+ +L++HLSLW+ F+ TRK+F  Q GLF  I      +E +N     RW++F+ QNYFDE G+F G+M   PLL L F ML+N L  A+S+LVTVK  +F+
Sbjct:   31 LNDVVEGLKDQIFADHVKGAPQTFREECAAFIAAVDWRENWIRCLLLWHLSLWVLFVFTRKNFPVQCGLFFGIAACVALAETLNGLCAKRWEKFATQNYFDERGVFAGIMLCAPLLALAFAMLLNFLVMASSMLVTVKRAEFR 173          
BLAST of mRNA_C-linearis_contig8.15659.1 vs. uniprot
Match: A0A7S2SGF8_9STRA (Transmembrane protein 18 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGF8_9STRA)

HSP 1 Score: 120 bits (301), Expect = 7.330e-31
Identity = 63/147 (42.86%), Postives = 93/147 (63.27%), Query Frame = 0
Query:   36 LGDVQATLLSQLNTQSV----GPEGFVENFQAFRSAVDWSETWIQGVLVFHLSLWLFFIITRKSFGAQVGLFTVILGGTRSSEFINTFLRDRWQEFSRQNYFDENGIFMGVMWAGPLLLLGFTMLVNLLCQAASLLVTVKTQQFKRE 178
            L D+  +L  Q+ T +      P G +++ QAF +AVDWSE WIQ +L FH++LW+  + TR+    Q G F  + G   S+E +NT+    WQ+FS+Q+YF  NG F+GVM+A PLL L    ++N LC AA+LLV VK ++ +R+
Sbjct:   27 LNDIIESLQEQVYTMAREAGNAPSGLLDDIQAFTAAVDWSERWIQALLGFHVALWMITLWTRRYIWWQCGTFFAVCGLVWSAEPMNTWAAAHWQDFSKQDYFQPNGFFVGVMYAAPLLALAMFQMINFLCIAANLLVEVKRKELRRK 173          
BLAST of mRNA_C-linearis_contig8.15659.1 vs. uniprot
Match: A0A7S2CTX0_9STRA (Transmembrane protein 18 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CTX0_9STRA)

HSP 1 Score: 115 bits (288), Expect = 6.480e-29
Identity = 61/149 (40.94%), Postives = 91/149 (61.07%), Query Frame = 0
Query:   35 FLGDVQATLLSQLNTQSVGPEGFVENFQAFRSAVDWSETWIQGVLVFHLSLWLFFIITRKSFGAQVGLFTVILGGTRSSEFINTFLRDRWQEFSRQNYFDENGIFMGVMWAGPLLLLGFTMLVNLLCQAASLLVTVKTQQFKREIAAKK 183
            F+G ++  + +        P+ F E+ QAF +AVDW+E WIQG+L+ H  LW+  +  R+ F  QV +F ++     SSE IN+    RWQ FS Q+YFD +G F+ VM+AGPLL L    ++N L  +A++LV VK  + K  +A+KK
Sbjct:   29 FIGGLEEQVYAMAREAGNAPKNFTEDVQAFIAAVDWNEKWIQGLLLGHFLLWVITLGFRRRFYLQVFIFFMVCAMVWSSEHINSAAHVRWQSFSTQDYFDPSGFFISVMFAGPLLALALFQMINFLIISANMLVEVKRNELKTNLASKK 177          
BLAST of mRNA_C-linearis_contig8.15659.1 vs. uniprot
Match: A0A2J6L7N8_LACSA (Transmembrane protein 18 n=2 Tax=Lactuca TaxID=4235 RepID=A0A2J6L7N8_LACSA)

HSP 1 Score: 104 bits (260), Expect = 5.950e-25
Identity = 51/146 (34.93%), Postives = 82/146 (56.16%), Query Frame = 0
Query:   31 AFTGFLGDVQATLLSQLNTQSVGPEGFVENFQAFRSAVDWSETWIQGVLVFHLSLWLFFIITRKSFGAQVGLFTVILGGTRSSEFINTFLRDRWQEFSRQNYFDENGIFMGVMWAGPLLLLGFTMLVNLLCQAASLLVTVKTQQFK 176
            A  G +  +Q  +    +   +G +  ++NF  F  A+DW E W+ G++VFH    +  + +RK+   Q+ LF + L G   +E +NT L D W+ F+ QNYFD NG+F+ V+W+GPLL+    +LVN L     L+V  K  + +
Sbjct:    7 AMNGHMDQMQELVEKISSELRIGMQPAMDNFIGFFHAIDWKEPWLVGLMVFHFVTLIIILTSRKNINFQMSLFLLSLAGVYLAERLNTVLSDNWKSFAGQNYFDRNGVFLSVLWSGPLLVFSLIILVNTLFSLCQLMVKWKRAELR 152          
BLAST of mRNA_C-linearis_contig8.15659.1 vs. uniprot
Match: A0A371GI83_MUCPR (Transmembrane protein 18 n=8 Tax=Phaseoleae TaxID=163735 RepID=A0A371GI83_MUCPR)

HSP 1 Score: 104 bits (260), Expect = 6.280e-25
Identity = 55/140 (39.29%), Postives = 82/140 (58.57%), Query Frame = 0
Query:   38 DVQATLLSQLNTQ-SVGPEGFVENFQAFRSAVDWSETWIQGVLVFHLSLWLFFIITRKSFGAQVGLFTVILGGTRSSEFINTFLRDRWQEFSRQNYFDENGIFMGVMWAGPLLLLGFTMLVNLLCQAASLLVTVKTQQFK 176
            D+ A L+ +L++    G     +NF  F  A+DW E W+ G+L FH+ L L  II+RK    Q+ LF + L G   +E +N FL   W+ FS QNYFD +G+FM V+W+GPLL++   +L+N L     L+V  K  + +
Sbjct:   13 DLMADLVQKLSSDLRAGIRPAYDNFMGFFHAIDWKEPWLMGLLAFHVVLLLVVIISRKKTNFQMFLFLLTLAGVYLAENLNRFLGKNWKSFSGQNYFDPSGLFMSVVWSGPLLVISMIILINTLFSLCYLIVRWKRAELR 152          
BLAST of mRNA_C-linearis_contig8.15659.1 vs. uniprot
Match: A0A444Z1X9_ARAHY (Transmembrane protein 18 n=2 Tax=Arachis TaxID=3817 RepID=A0A444Z1X9_ARAHY)

HSP 1 Score: 105 bits (262), Expect = 9.230e-25
Identity = 56/140 (40.00%), Postives = 83/140 (59.29%), Query Frame = 0
Query:   38 DVQATLLSQLNTQ-SVGPEGFVENFQAFRSAVDWSETWIQGVLVFHLSLWLFFIITRKSFGAQVGLFTVILGGTRSSEFINTFLRDRWQEFSRQNYFDENGIFMGVMWAGPLLLLGFTMLVNLLCQAASLLVTVKTQQFK 176
            D+ A L+ +L+++   G     +NF  F  A+DW E W+ G+  FH+ L L  IITR+    Q+ LF + L G   +E +NT LR  W+ FS QNYFD NG+FM V+W+GPLL++   +L+N L     L+V  K  + +
Sbjct:   57 DLMADLIQKLSSELRAGLRPAYDNFIGFFHAIDWKEPWLIGLAGFHIVLLLVTIITRRKTNFQMCLFLLTLAGVYLAERLNTVLRMNWKSFSSQNYFDPNGLFMSVLWSGPLLIIAMIILINTLFSLCYLIVRWKRAELR 196          
BLAST of mRNA_C-linearis_contig8.15659.1 vs. uniprot
Match: L1K301_GUITC (Transmembrane protein 18 n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K301_GUITC)

HSP 1 Score: 102 bits (255), Expect = 1.040e-24
Identity = 50/119 (42.02%), Postives = 80/119 (67.23%), Query Frame = 0
Query:   57 FVENFQAFRSAVDWSETWIQGVLVFHLSLWLFFIITRKSFGAQVGLFTVILGGTRSSEFINTFLRDRWQEFSRQNYFDENGIFMGVMWAGPLLLLGFTMLVNLLCQAASLLVTVKTQQF 175
            F  + + F SAV+W+ETWI  + +FH ++ L  I++R++   Q+ LF  ++G    +E +N FL   W+ FS QNYFD++G+F+ V+W+ PLLL+G  M+++ L  AASLLV V+ Q+ 
Sbjct:    3 FKNSVKGFVSAVEWTETWIIALGIFHFTMLLLAILSRRNSNIQIVLFCFMMGCIYLAEPLNRFLSTHWESFSTQNYFDKHGVFLSVVWSTPLLLIGAYMVIHTLIAAASLLVQVRLQRL 121          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15659.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI97_ECTSI4.440e-10681.86Transmembrane protein 18 n=2 Tax=Ectocarpus TaxID=... [more]
A0A835ZFQ2_9STRA1.940e-3746.31Transmembrane protein 18 n=1 Tax=Tribonema minus T... [more]
A0A7S2Y0G5_9STRA7.620e-3746.00Transmembrane protein 18 n=1 Tax=Fibrocapsa japoni... [more]
A0A7S4A3H0_9STRA2.080e-3146.15Transmembrane protein 18 n=1 Tax=Pelagomonas calce... [more]
A0A7S2SGF8_9STRA7.330e-3142.86Transmembrane protein 18 n=1 Tax=Rhizochromulina m... [more]
A0A7S2CTX0_9STRA6.480e-2940.94Transmembrane protein 18 n=1 Tax=Dictyocha speculu... [more]
A0A2J6L7N8_LACSA5.950e-2534.93Transmembrane protein 18 n=2 Tax=Lactuca TaxID=423... [more]
A0A371GI83_MUCPR6.280e-2539.29Transmembrane protein 18 n=8 Tax=Phaseoleae TaxID=... [more]
A0A444Z1X9_ARAHY9.230e-2540.00Transmembrane protein 18 n=2 Tax=Arachis TaxID=381... [more]
L1K301_GUITC1.040e-2442.02Transmembrane protein 18 n=1 Tax=Guillardia theta ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026721Transmembrane protein 18PFAMPF14770TMEM18coord: 64..178
e-value: 3.4E-38
score: 130.3
NoneNo IPR availablePANTHERPTHR22593FAMILY NOT NAMEDcoord: 25..183
NoneNo IPR availablePANTHERPTHR22593:SF2TRANSMEMBRANE PROTEIN 18coord: 25..183
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..91
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 140..168
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..73
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 121..139
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 169..203
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 92..99
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 100..120
NoneNo IPR availableTMHMMTMhelixcoord: 70..92
NoneNo IPR availableTMHMMTMhelixcoord: 138..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:2283528..2286310 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15659.1mRNA_C-linearis_contig8.15659.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 2282772..2286333 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15659.1 ID=prot_C-linearis_contig8.15659.1|Name=mRNA_C-linearis_contig8.15659.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=204bp
MASAAEDGVDQAAESLGGGVIAERLEQHGEAFTGFLGDVQATLLSQLNTQ
SVGPEGFVENFQAFRSAVDWSETWIQGVLVFHLSLWLFFIITRKSFGAQV
GLFTVILGGTRSSEFINTFLRDRWQEFSRQNYFDENGIFMGVMWAGPLLL
LGFTMLVNLLCQAASLLVTVKTQQFKREIAAKKEAGKSKAKRGSKDKKAM
KQA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026721TMEM18