prot_C-linearis_contig8.15648.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15648.1
Unique Nameprot_C-linearis_contig8.15648.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length88
Homology
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BLAST of mRNA_C-linearis_contig8.15648.1 vs. uniprot
Match: D8LI90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI90_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 2.690e-34
Identity = 60/86 (69.77%), Postives = 69/86 (80.23%), Query Frame = 0 
Query:    2 CWFYFGRAVELEGAFLCSSEFDPLLSFFQTAPTLRAYQYGRFEMHLAAAGDGSIWFAESERYTYTMVTNFYTCGVAVQPLNSTTVS 87
            CWFYFGR VEL   F+CSS+ DP LS FQ  PTLR Y YGRFEM+L+ AG+GS+WF  SE+Y Y MVTNFYTCGV VQPL+STTV+
Sbjct:    7 CWFYFGRTVELGQTFVCSSDPDPQLSAFQNTPTLRPYTYGRFEMYLSTAGNGSLWFGISEQYKYAMVTNFYTCGVTVQPLDSTTVT 92
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15648.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LI90_ECTSI2.690e-3469.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:2210478..2210741 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15648.1mRNA_C-linearis_contig8.15648.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 2210478..2210741 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15648.1 ID=prot_C-linearis_contig8.15648.1|Name=mRNA_C-linearis_contig8.15648.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=88bp
RCWFYFGRAVELEGAFLCSSEFDPLLSFFQTAPTLRAYQYGRFEMHLAAA
GDGSIWFAESERYTYTMVTNFYTCGVAVQPLNSTTVS*
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