prot_C-linearis_contig8.15631.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15631.1
Unique Nameprot_C-linearis_contig8.15631.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length235
Homology
[Close]
BLAST of mRNA_C-linearis_contig8.15631.1 vs. uniprot
Match: D7FJF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJF7_ECTSI)

HSP 1 Score: 282 bits (722), Expect = 8.320e-94
Identity = 142/175 (81.14%), Postives = 154/175 (88.00%), Query Frame = 0 
Query:   61 SKRNVRISSSVTVVNGLYWSFYVGVLESQLPTTTWEPWGYVGLGFTAIMAAASHTFAKHCVSQISYLPDLRLLSIGTHTFLGNERMPRLVRLGGTVVTRTRPDAMYLTFKVRGDYFNSLLDTDDGVIHNKEMLMRLLKASPHGKVAGPSAAANDSDESTVV-KTKPKWKKRKRRR 234
            S+RNVRISSSVTVVNGLYWSFYVGVLE  LPTTTWEPWGY+GLGFTAIM AA+HTFA+H VSQISYLP+LRLLSIGTH F G ERMPRLVRLGGTVV+RT+P A+YLTFKVRGD FNSLLDT DGV HN+EMLMRLLKASP+G+VA PSAAA DS+ S    K K KW KRKRRR
Sbjct:   31 SQRNVRISSSVTVVNGLYWSFYVGVLEPHLPTTTWEPWGYLGLGFTAIMTAATHTFARHWVSQISYLPELRLLSIGTHNFFGAERMPRLVRLGGTVVSRTKPKAVYLTFKVRGDRFNSLLDTADGVFHNREMLMRLLKASPNGEVADPSAAAKDSNGSPAPGKKKQKWNKRKRRR 205
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15631.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FJF7_ECTSI8.320e-9481.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:2094308..2097146 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15631.1mRNA_C-linearis_contig8.15631.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 2094308..2097146 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15631.1 ID=prot_C-linearis_contig8.15631.1|Name=mRNA_C-linearis_contig8.15631.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=235bp
RLANAAAHRCLSTAVADGPTRDTTASTPAAGQEQDAAGPGSASTETDGMA
DPRHILLYTGSKRNVRISSSVTVVNGLYWSFYVGVLESQLPTTTWEPWGY
VGLGFTAIMAAASHTFAKHCVSQISYLPDLRLLSIGTHTFLGNERMPRLV
RLGGTVVTRTRPDAMYLTFKVRGDYFNSLLDTDDGVIHNKEMLMRLLKAS
PHGKVAGPSAAANDSDESTVVKTKPKWKKRKRRR*
back to top