prot_C-linearis_contig8.15621.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15621.1
Unique Nameprot_C-linearis_contig8.15621.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length190
Homology
BLAST of mRNA_C-linearis_contig8.15621.1 vs. uniprot
Match: A0A6H5KF19_9PHAE (Mitochondrial import inner membrane translocase subunit TIM22 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KF19_9PHAE)

HSP 1 Score: 318 bits (814), Expect = 9.000e-109
Identity = 159/189 (84.13%), Postives = 172/189 (91.01%), Query Frame = 0
Query:    3 EGDRRHDRSYMDR--PGSRSLPPHMGSRLPFFLPWVPKPAEGAADGLPSPPVLTESCGFKLIMGTVGGAGMGFVFGIFLGAMGDMQPLQMVNGREVPQAPLREQARQAYKQTAERSLSLGRNFATFSAMFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPSAACFGCVGMAAFSAAMDKLMGH 189
            +G+RRHD     +   GSRSL P +GSRLPFFLPWVP+PA GAAD +P+PPVLTESCGFKLIMGTVGGAGMGFVFG+FLGAMGDMQPLQM+NGREVPQAP REQAR AYKQTA+RSLS+GRNFA+FSA+FMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGP AACFGCVGMA FSA MDKLMGH
Sbjct:    4 DGERRHDECCKQQGTEGSRSLHPQLGSRLPFFLPWVPRPAAGAADAMPTPPVLTESCGFKLIMGTVGGAGMGFVFGLFLGAMGDMQPLQMINGREVPQAPFREQARLAYKQTADRSLSMGRNFASFSAIFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPQAACFGCVGMATFSALMDKLMGH 192          
BLAST of mRNA_C-linearis_contig8.15621.1 vs. uniprot
Match: A0A836C710_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C710_9STRA)

HSP 1 Score: 200 bits (509), Expect = 2.870e-62
Identity = 101/142 (71.13%), Postives = 115/142 (80.99%), Query Frame = 0
Query:   48 PSPPVLTESCGFKLIMGTVGGAGMGFVFGIFLGAMGDMQPLQMVNGREVPQAPLREQARQAYKQTAERSLSLGRNFATFSAMFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPSAACFGCVGMAAFSAAMDKLMGH 189
            P PP L ESCG +LIMGT GG GMG +FG+FLGAMGDMQP+Q++NGREVPQAPL EQAR AY  T  RSL + +NFA+FSA+FM SECVIEKMRGK DMMNSVY GC TG AFG+K GP  A  GC+GMAAFSA +D +MGH
Sbjct:   58 PQPPALGESCGARLIMGTAGGFGMGLLFGMFLGAMGDMQPIQVINGREVPQAPLGEQARAAYLGTKSRSLGMAKNFASFSAIFMASECVIEKMRGKHDMMNSVYGGCITGMAFGIKAGPKEAVGGCLGMAAFSAVIDAVMGH 199          
BLAST of mRNA_C-linearis_contig8.15621.1 vs. uniprot
Match: A0A7S2P255_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P255_9STRA)

HSP 1 Score: 163 bits (413), Expect = 1.880e-47
Identity = 85/164 (51.83%), Postives = 110/164 (67.07%), Query Frame = 0
Query:   27 SRLPFFLPWVPKPAEGAADGLPSPPVLTESCGFKLIMGTVGGAGMGFVFGIFLGAMGDMQP-LQMVNGREVPQAPLREQARQAYKQTAERSLSLGRNFATFSAMFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPSAACFGCVGMAAFSAAMDKLMGH 189
            +RLP+ +PW+P    GA +  P    +TESCG K  +G  GGA MG + G+FLGAM DM P + ++NG+EVPQAPL+EQAR   + T E+ +   RNFA  + +F GSEC++EK RGK D+ N V +GC TGAA   KQGP AA  GC G AAFS  +D +MGH
Sbjct:   58 TRLPYLIPWMPT-FNGAQEPPPDFSFMTESCGIKSAIGLFGGAAMGLLMGVFLGAMSDMTPPVTVINGKEVPQAPLKEQARTVMRATGEKCVYWSRNFAFITGVFAGSECLVEKARGKHDVWNQVLSGCVTGAAIQAKQGPQAAALGCGGFAAFSLVIDAVMGH 220          
BLAST of mRNA_C-linearis_contig8.15621.1 vs. uniprot
Match: A0A6U3RYY1_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RYY1_9STRA)

HSP 1 Score: 157 bits (397), Expect = 1.770e-44
Identity = 89/182 (48.90%), Postives = 112/182 (61.54%), Query Frame = 0
Query:    8 HDRSYMDRPGSRSLPPHMGSRLPFFLPWVPKPAEGAADGLPSPPVLTESCGFKLIMGTVGGAGMGFVFGIFLGAMGDMQP-LQMVNGREVPQAPLREQARQAYKQTAERSLSLGRNFATFSAMFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPSAACFGCVGMAAFSAAMDKLMG 188
            H R+  D     SL       LP+F PW  KP  G     P    L+ESCG K  +G  GG  MG + G+FLGAM DM P + ++ G+EVPQAPL+EQ R   + TAE+S+   R FA  + +F GSEC++EK RGKTD+ NSV +GC TGAA   K GPS+A FGC G AAFS  +D +MG
Sbjct:   84 HQRAENDANKDMSLSTLTSKSLPYFQPW--KPTSGPEQLPPDFTFLSESCGGKAAIGVFGGGVMGLLMGVFLGAMSDMTPPVTVIGGKEVPQAPLKEQMRTTMRATAEKSMYWCRQFAFITGVFSGSECLVEKYRGKTDVWNSVLSGCVTGAAMQAKAGPSSAAFGCGGFAAFSLVIDSVMG 263          
BLAST of mRNA_C-linearis_contig8.15621.1 vs. uniprot
Match: A0A7S1TYW7_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYW7_9STRA)

HSP 1 Score: 147 bits (370), Expect = 2.480e-41
Identity = 79/162 (48.77%), Postives = 100/162 (61.73%), Query Frame = 0
Query:   29 LPFFLPWVPKPAEGAADGLPSPPVLTESCGFKLIMGTVGGAGMGFVFGIFLGAMGDMQP-LQMVNGREVPQAPLREQARQAYKQTAERSLSLGRNFATFSAMFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPSAACFGCVGMAAFSAAMDKLMGH 189
            +P F P  P P         +P    ESC  + ++G+  G  MG V G+FLGAMGD+ P +  V G+E PQ PL EQAR AY+ TAERS+   R+F   +A+F G+ECVIEK RG+ D  N V +GCA GA      GP+AAC GC G AAFSAA + +MGH
Sbjct:   37 VPIFTPATPHPGV-------NPGWAAESCVGRAVLGSFAGGAMGLVLGVFLGAMGDLNPPIYFVKGKEAPQPPLAEQARTAYRTTAERSIGFARSFFALTALFSGTECVIEKFRGRHDGWNPVLSGCAAGAMMSASGGPTAACMGCAGFAAFSAAAEAVMGH 191          
BLAST of mRNA_C-linearis_contig8.15621.1 vs. uniprot
Match: A0A1Z5K7I7_FISSO (Mitochondrial import inner membrane translocase subunit TIM22 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7I7_FISSO)

HSP 1 Score: 146 bits (369), Expect = 2.600e-40
Identity = 81/162 (50.00%), Postives = 103/162 (63.58%), Query Frame = 0
Query:   29 LPFFLPWVPKPAEGAADGLPSPPVLTESCGFKLIMGTVGGAGMGFVFGIFLGAMGDMQP-LQMVNGREVPQAPLREQARQAYKQTAERSLSLGRNFATFSAMFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPSAACFGCVGMAAFSAAMDKLMGH 189
            LP+ LPW  KP     +  P    LT SC  K+ +G +GGAGMG + G+FLGA+ D  P +Q++ GR+VPQAPLREQ R   + TAE+S     NFA  + +F GSEC++EK RGK D+ NSV +GC TGAA   K GP +A  GC G AAFS  +D  M H
Sbjct:  104 LPYPLPW--KPVASPTEPPPDFSWLTGSCAGKVAIGVIGGAGMGALMGLFLGALSDTTPPVQVIGGRDVPQAPLREQMRVVMRATAEKSRYWAGNFAFITGVFAGSECLVEKYRGKNDLWNSVASGCITGAAMQAKAGPQSAALGCGGFAAFSLVIDSFMHH 263          
BLAST of mRNA_C-linearis_contig8.15621.1 vs. uniprot
Match: A0A7S2AAN4_TRICV (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2AAN4_TRICV)

HSP 1 Score: 145 bits (367), Expect = 4.800e-40
Identity = 79/164 (48.17%), Postives = 100/164 (60.98%), Query Frame = 0
Query:   29 LPFFLPWVPKPAEGAADGLPSPPV--LTESCGFKLIMGTVGGAGMGFVFGIFLGAMGDMQP-LQMVNGREVPQAPLREQARQAYKQTAERSLSLGRNFATFSAMFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPSAACFGCVGMAAFSAAMDKLMGH 189
            LP+  PW P P   A+   P P    L+ESCG K  +G  GGA  G   G+FLGAM DM P + ++NG+EVPQAPL+EQ R   + T E+ +   RNFA  + +F G+EC++EK RGK D+ NS   GC TGAA   KQGP AA  GC G A FS  +D +  H
Sbjct:   97 LPYLTPWYPIPGPNASAEGPPPDFSWLSESCGGKAAIGVFGGAVCGLFMGVFLGAMSDMTPPVTVINGKEVPQAPLKEQMRTTVRATGEKCIYWSRNFAFITGVFGGTECLVEKYRGKHDVWNSALGGCVTGAALQAKQGPQAAAIGCGGFAVFSLVIDSVFPH 260          
BLAST of mRNA_C-linearis_contig8.15621.1 vs. uniprot
Match: A0A448Z601_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z601_9STRA)

HSP 1 Score: 143 bits (361), Expect = 5.180e-39
Identity = 78/162 (48.15%), Postives = 104/162 (64.20%), Query Frame = 0
Query:   29 LPFFLPWVPKPAEGAADGLPSPPVLTESCGFKLIMGTVGGAGMGFVFGIFLGAMGDMQP-LQMVNGREVPQAPLREQARQAYKQTAERSLSLGRNFATFSAMFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPSAACFGCVGMAAFSAAMDKLMGH 189
            LP+F+PW  K + G  +  P+   L + C  K  +G  GG  MG + G+FLGA+ D QP +Q+  G++VPQAP +EQAR   + TAE+S+   RNFA  + +F GSEC++EK RGK DM N V +GC TGAA     GP AA  GC G AAFS  +DK+MG+
Sbjct:  111 LPYFMPW--KTSGGPTEIPPNYAWLMDGCAGKAAIGVFGGGVMGLLMGVFLGALSDSQPPIQVAGGKDVPQAPFKEQARYTMRATAEKSMYWCRNFAFITGVFGGSECLVEKFRGKHDMWNPVVSGCITGAALQAHAGPQAAAVGCGGFAAFSIVIDKIMGN 270          
BLAST of mRNA_C-linearis_contig8.15621.1 vs. uniprot
Match: A0A7S3VGZ9_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VGZ9_9STRA)

HSP 1 Score: 140 bits (353), Expect = 3.280e-38
Identity = 81/168 (48.21%), Postives = 105/168 (62.50%), Query Frame = 0
Query:   23 PHMGSRLPFFLPWVPKPAEGAADGLPSP-PVLTESCGFKLIMGTVGGAGMGFVFGIFLGAMGDMQP-LQMVNGREVPQAPLREQARQAYKQTAERSLSLGRNFATFSAMFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPSAACFGCVGMAAFSAAMDKLMG 188
            P     + + +PW    A    D LP     L+ESC  K  +G +GG+  G V G+FLGAM DM P + ++NG+EVPQAPLREQ R   + T E+SL   RNFA  + +F G++C++EK RG  D+ NSV +GC TGAA   KQGP AA  GC G AAFS  +DK+MG
Sbjct:   71 PPQAQYMAYPVPWR---ATSGPDYLPPDFGWLSESCAGKTAIGVLGGSVCGLVMGVFLGAMSDMTPPVTIINGKEVPQAPLREQMRTTLRATGEKSLYWARNFAFITGVFGGTDCLVEKYRGTHDVWNSVISGCVTGAAMQAKQGPQAAAIGCGGFAAFSLVIDKVMG 235          
BLAST of mRNA_C-linearis_contig8.15621.1 vs. uniprot
Match: A0A7R9WDT6_9STRA (Mitochondrial import inner membrane translocase subunit TIM22 (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WDT6_9STRA)

HSP 1 Score: 140 bits (352), Expect = 5.880e-38
Identity = 76/161 (47.20%), Postives = 99/161 (61.49%), Query Frame = 0
Query:   29 LPFFLPWVPKPAEGAADGLPSPPV--LTESCGFKLIMGTVGGAGMGFVFGIFLGAMGDMQP-LQMVNGREVPQAPLREQARQAYKQTAERSLSLGRNFATFSAMFMGSECVIEKMRGKTDMMNSVYAGCATGAAFGMKQGPSAACFGCVGMAAFSAAMDKL 186
            +P   PW P P   ++   P P    L+ESCG K  MG  GGA  G + G+FLGAM DM P + +++G+EVPQAPL+EQ R   + T E+ L   RNFA  + +F G+EC++EK RGK D+ N+   GC TGAA   KQGP AA  GC G A FS  +D +
Sbjct:   86 IPVLTPWYPVPGPNSSMEGPPPDFSWLSESCGGKAAMGVFGGAVCGLLMGVFLGAMSDMTPPVTVIDGKEVPQAPLKEQVRTTLRATGEKCLYWSRNFAFITGVFGGTECLVEKYRGKHDVWNAAIGGCVTGAALQAKQGPQAAAIGCGGFAVFSLVIDSV 246          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15621.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KF19_9PHAE9.000e-10984.13Mitochondrial import inner membrane translocase su... [more]
A0A836C710_9STRA2.870e-6271.13Mitochondrial import inner membrane translocase su... [more]
A0A7S2P255_9STRA1.880e-4751.83Mitochondrial import inner membrane translocase su... [more]
A0A6U3RYY1_9STRA1.770e-4448.90Mitochondrial import inner membrane translocase su... [more]
A0A7S1TYW7_9STRA2.480e-4148.77Mitochondrial import inner membrane translocase su... [more]
A0A1Z5K7I7_FISSO2.600e-4050.00Mitochondrial import inner membrane translocase su... [more]
A0A7S2AAN4_TRICV4.800e-4048.17Mitochondrial import inner membrane translocase su... [more]
A0A448Z601_9STRA5.180e-3948.15Mitochondrial import inner membrane translocase su... [more]
A0A7S3VGZ9_9STRA3.280e-3848.21Mitochondrial import inner membrane translocase su... [more]
A0A7R9WDT6_9STRA5.880e-3847.20Mitochondrial import inner membrane translocase su... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF02466Tim17coord: 58..180
e-value: 1.1E-29
score: 103.0
NoneNo IPR availablePANTHERPTHR14110:SF0MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22coord: 54..188
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 82..189
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 61..81
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..60
NoneNo IPR availableTMHMMTMhelixcoord: 61..83
IPR039175Mitochondrial import inner membrane translocase subunit TIM22PANTHERPTHR14110MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22coord: 54..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:1954692..1956711 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15621.1mRNA_C-linearis_contig8.15621.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 1954662..1956778 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15621.1 ID=prot_C-linearis_contig8.15621.1|Name=mRNA_C-linearis_contig8.15621.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=190bp
MAEGDRRHDRSYMDRPGSRSLPPHMGSRLPFFLPWVPKPAEGAADGLPSP
PVLTESCGFKLIMGTVGGAGMGFVFGIFLGAMGDMQPLQMVNGREVPQAP
LREQARQAYKQTAERSLSLGRNFATFSAMFMGSECVIEKMRGKTDMMNSV
YAGCATGAAFGMKQGPSAACFGCVGMAAFSAAMDKLMGH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039175TIM22