prot_C-linearis_contig8.15608.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15608.1
Unique Nameprot_C-linearis_contig8.15608.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length62
Homology
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BLAST of mRNA_C-linearis_contig8.15608.1 vs. uniprot
Match: D8LUA6_ECTSI (WW domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUA6_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 1.050e-27
Identity = 51/62 (82.26%), Postives = 56/62 (90.32%), Query Frame = 0 
Query:    1 HFDRRRCGYVNVAEIRDALADLRLNLSPEEGKELHSMITLDGGDRLSYAEFIVFVTDPHHSE 62
            HFDRRRCGYVNVAE+RDALADLR+ LS  E  +LHSM+ LDGGDRLSYAEF+VFVTDPHHSE
Sbjct:  784 HFDRRRCGYVNVAEMRDALADLRIKLSAREATDLHSMMALDGGDRLSYAEFVVFVTDPHHSE 845
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BLAST of mRNA_C-linearis_contig8.15608.1 vs. uniprot
Match: A0A6H5J9P3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9P3_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 1.050e-27
Identity = 51/62 (82.26%), Postives = 56/62 (90.32%), Query Frame = 0 
Query:    1 HFDRRRCGYVNVAEIRDALADLRLNLSPEEGKELHSMITLDGGDRLSYAEFIVFVTDPHHSE 62
            HFDRRRCGYVNVAE+RDALADLR+ LS  E  +LHSM+ LDGGDRLSYAEF+VFVTDPHHSE
Sbjct:  790 HFDRRRCGYVNVAEMRDALADLRIKLSAREATDLHSMMALDGGDRLSYAEFVVFVTDPHHSE 851
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15608.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LUA6_ECTSI1.050e-2782.26WW domain containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5J9P3_9PHAE1.050e-2782.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 1..61
e-value: 1.7E-9
score: 39.2
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 1..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:1813883..1814509 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15608.1mRNA_C-linearis_contig8.15608.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 1813882..1814509 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15608.1 ID=prot_C-linearis_contig8.15608.1|Name=mRNA_C-linearis_contig8.15608.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=62bp
HFDRRRCGYVNVAEIRDALADLRLNLSPEEGKELHSMITLDGGDRLSYAE
FIVFVTDPHHSE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair