prot_C-linearis_contig8.15600.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15600.1
Unique Nameprot_C-linearis_contig8.15600.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length183
Homology
BLAST of mRNA_C-linearis_contig8.15600.1 vs. uniprot
Match: D7G8H6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8H6_ECTSI)

HSP 1 Score: 179 bits (453), Expect = 2.760e-54
Identity = 111/181 (61.33%), Postives = 126/181 (69.61%), Query Frame = 0
Query:    2 FGARHPALMMVAAFLWPSAQSFTAVPVPSIPREGYGAPATAVLKAYVEHQSASSSPEQAGFAPGVVDAAGASRPRAARPAGSFERALQGAALGATTGFATASGALAEYIDPDDVGEIVSSELPPMWVPLAIGVVLTVGISLLQGSLGDVMNDEAKLGALSGARAAKQSARDRDMFKKKDPK 182
            FG    +L+M+A  L  SAQ+FT   VPS+          AV  +   H +    P  +G      D   AS+ +A RP G FERALQGA+  A TGFA AS  LAEYIDPDDVGE+VSS+LPPMWVPLA+G VLT+GI LLQGSLGDVMNDEAKLGALSGARAAKQSARDRDMFKKKD K
Sbjct:    3 FGMGRASLVMLAIVLRRSAQAFT---VPSM---------MAVRPSQQAH-ALQQHPPASGQVFDATDVVPASKGQAPRPRGQFERALQGASFTAATGFAGASSVLAEYIDPDDVGEVVSSDLPPMWVPLAVGFVLTLGIGLLQGSLGDVMNDEAKLGALSGARAAKQSARDRDMFKKKDQK 170          
BLAST of mRNA_C-linearis_contig8.15600.1 vs. uniprot
Match: A0A836CD09_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD09_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 3.030e-21
Identity = 54/93 (58.06%), Postives = 64/93 (68.82%), Query Frame = 0
Query:   88 LQGAALGATTG-FATASGALAEYIDPDDVGEIVSSELPPMWVPLAIGVVLTVGISLLQGSLGDVMNDEAKLGALSGARAAKQSARDRDMFKKK 179
            L GAA  A  G  A+A  A+A  +D + V   +  ELPPMWVPL +G V+  GI   Q SLG+VM+DEAKLG LSGARAAKQSAR R MFK+K
Sbjct:   14 LPGAAATAAFGALASAQAAIAVVVDEEQVVTSMRDELPPMWVPLVLGAVVLAGIGAQQLSLGNVMDDEAKLGGLSGARAAKQSARGRSMFKRK 106          
BLAST of mRNA_C-linearis_contig8.15600.1 vs. uniprot
Match: A0A7S3Y243_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y243_HETAK)

HSP 1 Score: 76.6 bits (187), Expect = 4.750e-13
Identity = 38/64 (59.38%), Postives = 45/64 (70.31%), Query Frame = 0
Query:  108 EYIDPDDVGEIVSSELPPMWVPLAIGVVLTVGISLLQGSLGDVMNDEAKLGALSGARAAKQSAR 171
            + +D    GE+   ELPPMWVPLA G VL VGI +LQ SLGDVM  EA LG+ SGARA K++ R
Sbjct:  449 DTVDDPTSGEVAKEELPPMWVPLATGAVLFVGIGVLQASLGDVMEAEAGLGSASGARARKENTR 512          
BLAST of mRNA_C-linearis_contig8.15600.1 vs. uniprot
Match: A0A7S3PV07_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PV07_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.120e-10
Identity = 31/59 (52.54%), Postives = 42/59 (71.19%), Query Frame = 0
Query:  121 SELPPMWVPLAIGVVLTVGISLLQGSLGDVMNDEAKLGALSGARAAKQSARDRDMFKKK 179
            +ELPP+WVP+   +V+  G+ LL  SLGDVMN+EA LG +SGA+A K+  R R  + KK
Sbjct:   78 AELPPVWVPILFAIVIIGGVGLLTFSLGDVMNEEASLGLMSGAKAKKEKERSRSSYFKK 136          
BLAST of mRNA_C-linearis_contig8.15600.1 vs. uniprot
Match: A0A7R9ZRN9_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZRN9_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 8.860e-10
Identity = 31/59 (52.54%), Postives = 42/59 (71.19%), Query Frame = 0
Query:  121 SELPPMWVPLAIGVVLTVGISLLQGSLGDVMNDEAKLGALSGARAAKQSARDRDMFKKK 179
            +ELPP+WVP    +VL VG+ LL GSLG+V+++E+ LG  SGARA K+  R R  + KK
Sbjct:   65 AELPPVWVPAVFALVLLVGVGLLTGSLGNVIDEESMLGLQSGARAKKEIERSRSSYFKK 123          
BLAST of mRNA_C-linearis_contig8.15600.1 vs. uniprot
Match: A0A7S2V989_9STRA (Hypothetical protein n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2V989_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 2.970e-9
Identity = 33/63 (52.38%), Postives = 43/63 (68.25%), Query Frame = 0
Query:  117 EIVSSELPPMWVPLAIGVVLTVGISLLQGSLGDVMNDEAKLGALSGARAAKQSARDRDMFKKK 179
            ++  +ELPP +VP   GV L VG+ LL GSLG+VM++EA LG  SGARA K+  R R  + KK
Sbjct:   86 DVQFAELPPPYVPALFGVGLLVGVGLLTGSLGNVMDEEASLGMQSGARAKKEIERSRSSYFKK 148          
BLAST of mRNA_C-linearis_contig8.15600.1 vs. uniprot
Match: A0A6U1Q394_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1Q394_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.770e-8
Identity = 28/54 (51.85%), Postives = 38/54 (70.37%), Query Frame = 0
Query:  123 LPPMWVPLAIGVVLTVGISLLQGSLGDVMNDEAKLGALSGARAAKQSARDRDMF 176
            LPP WVP+ + + L  G+ LLQ SLG+V +DEA LG+ SGARA K+S R++   
Sbjct:   89 LPPFWVPVGVAIALLGGVGLLQLSLGNVADDEAMLGSASGARARKESTRNKKFL 142          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15600.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7G8H6_ECTSI2.760e-5461.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CD09_9STRA3.030e-2158.06Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3Y243_HETAK4.750e-1359.38Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3PV07_9STRA1.120e-1052.54Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7R9ZRN9_9STRA8.860e-1052.54Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S2V989_9STRA2.970e-952.38Hypothetical protein n=2 Tax=Amphiprora paludosa T... [more]
A0A6U1Q394_9STRA2.770e-851.85Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..182
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.777

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:1745520..1749103 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15600.1mRNA_C-linearis_contig8.15600.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 1744869..1749241 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15600.1 ID=prot_C-linearis_contig8.15600.1|Name=mRNA_C-linearis_contig8.15600.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=183bp
MFGARHPALMMVAAFLWPSAQSFTAVPVPSIPREGYGAPATAVLKAYVEH
QSASSSPEQAGFAPGVVDAAGASRPRAARPAGSFERALQGAALGATTGFA
TASGALAEYIDPDDVGEIVSSELPPMWVPLAIGVVLTVGISLLQGSLGDV
MNDEAKLGALSGARAAKQSARDRDMFKKKDPK*
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