prot_C-linearis_contig8.15592.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig8.15592.1
Unique Name	prot_C-linearis_contig8.15592.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	322

Homology

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BLAST of mRNA_C-linearis_contig8.15592.1 vs. uniprot
Match: D7G096_ECTSI (Ubiquitin-conjugating enzyme type E2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G096_ECTSI)

HSP 1 Score: 335 bits (858), Expect = 1.090e-111
Identity = 160/163 (98.16%), Postives = 161/163 (98.77%), Query Frame = 0

Query:    1 MLSMSPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGTWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYENRIRECVRLHASDPVHLDGTPVAV 163
            MLSMSPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGG WKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAY+NRIRECVRLHASDPVHLDGTPV V
Sbjct:    1 MLSMSPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGVWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHLDGTPVVV 163

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BLAST of mRNA_C-linearis_contig8.15592.1 vs. uniprot
Match: A0A835Z4W6_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4W6_9STRA)

HSP 1 Score: 267 bits (683), Expect = 2.920e-86
Identity = 123/153 (80.39%), Postives = 139/153 (90.85%), Query Frame = 0

Query:    5 SPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGTWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYENRIRECVRLHASDPVHLD 157
            SP+KRRD DMMKLMMSDF VHIPDE SMHDF+VAFPGP +TPY+GG WKVHV+LP+EYP++SPSIGFENR++HPNVDEMSGSVCLDVINQTWSPMFDLVNIF +F+PQLL+YPNPTDPLN EAAAL++RDPKAY  RIRE VRLHAS  +  D
Sbjct:    3 SPTKRRDMDMMKLMMSDFAVHIPDECSMHDFMVAFPGPANTPYEGGVWKVHVSLPREYPYRSPSIGFENRIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFTIFLPQLLAYPNPTDPLNSEAAALMLRDPKAYGARIRESVRLHASRAITFD 155

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BLAST of mRNA_C-linearis_contig8.15592.1 vs. uniprot
Match: A0A7S2AI60_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AI60_9STRA)

HSP 1 Score: 247 bits (630), Expect = 1.810e-78
Identity = 116/152 (76.32%), Postives = 132/152 (86.84%), Query Frame = 0

Query:    5 SPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGTWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYENRIRECVRLHASDPVHL 156
            +P+KRR  DMMKLMMSD+EV+IPDESSMHDF V F GP DTPY+GG WK+HVTLP  YPFKSPSIGF+NRMFHPNVD++SGSVCLDVINQTWSPMF+LVNIF++F+P LL YPNPTDPLNGEAAAL+MRDP AY  RIRE VR  A+  + L
Sbjct:    6 TPNKRRHQDMMKLMMSDYEVNIPDESSMHDFFVKFEGPPDTPYEGGVWKIHVTLPPAYPFKSPSIGFKNRMFHPNVDDISGSVCLDVINQTWSPMFNLVNIFEVFLPHLLRYPNPTDPLNGEAAALMMRDPDAYALRIREHVRQFATARIDL 157

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BLAST of mRNA_C-linearis_contig8.15592.1 vs. uniprot
Match: A0A7S2W0L0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0L0_9STRA)

HSP 1 Score: 243 bits (619), Expect = 1.840e-76
Identity = 113/158 (71.52%), Postives = 135/158 (85.44%), Query Frame = 0

Query:    7 SKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGTWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYENRIRECVRLHASDPVHLDGTPVAVA 164
            SKR   DMMKLMMSD+EVHIP+E S+H+F V F GP +TPY+GG WKVHV LP++YPFKSPSIGF+NR++HPNVD++SGSVCLDVINQTWSPMF+LVNIF++F+PQLL YPNPTDPLNGEA AL+MRDP+AY +RIR+ VR  AS  V L G P+  A
Sbjct:   20 SKRMHRDMMKLMMSDYEVHIPNEQSVHEFFVKFHGPAETPYEGGVWKVHVMLPRDYPFKSPSIGFKNRIYHPNVDDLSGSVCLDVINQTWSPMFNLVNIFEIFLPQLLRYPNPTDPLNGEAGALMMRDPEAYASRIRDYVRSFASSTVELKG-PIPAA 176

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BLAST of mRNA_C-linearis_contig8.15592.1 vs. uniprot
Match: A0A7S2BA17_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BA17_9STRA)

HSP 1 Score: 244 bits (622), Expect = 2.960e-76
Identity = 115/154 (74.68%), Postives = 132/154 (85.71%), Query Frame = 0

Query:    5 SPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGTWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYENRIRECVRLHASDPVHLDG 158
            +P+KRR  DMMKLMMSD+EV IPDES MHDF V F GP +TPY+ G+WK+HVTLP +YPFKSPSIGF+NRMFHPNVD++SGSVCLDVINQTWSPMF+LVNIF+ F+P LL YPNPTDPLNGEAAALLMRDP AY  RIR+ VR +AS  + L G
Sbjct:   65 NPNKRRHQDMMKLMMSDYEVLIPDESCMHDFFVKFDGPAETPYENGSWKIHVTLPADYPFKSPSIGFKNRMFHPNVDDISGSVCLDVINQTWSPMFNLVNIFEQFLPHLLRYPNPTDPLNGEAAALLMRDPDAYNLRIRDHVRQYASAKIDLVG 218

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BLAST of mRNA_C-linearis_contig8.15592.1 vs. uniprot
Match: A0A2D4C6N9_PYTIN (Ubiquitin-conjugating enzyme E2, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6N9_PYTIN)

HSP 1 Score: 238 bits (607), Expect = 1.640e-75
Identity = 109/153 (71.24%), Postives = 134/153 (87.58%), Query Frame = 0

Query:    4 MSPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGTWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYENRIRECVRLHASDPVHL 156
            MS +KRR+ D+MKLMMS+++VH+ DES  +DF V F GP+DTPY+GG WK+HV+LPKEYPFKSPSIGF NR++HPNVD+MSGSVCLDVINQTWSPMFDL+NIF +FIPQLL YPNPTDPLNGEAA+LLM+D +AY  ++RE VR +AS P+ +
Sbjct:    1 MSSNKRREKDVMKLMMSNYDVHLTDESRANDFHVKFHGPKDTPYEGGLWKIHVSLPKEYPFKSPSIGFVNRIYHPNVDDMSGSVCLDVINQTWSPMFDLLNIFDMFIPQLLRYPNPTDPLNGEAASLLMKDIEAYNAKVREYVRNYASQPIDM 153

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BLAST of mRNA_C-linearis_contig8.15592.1 vs. uniprot
Match: H3G861_PHYRM (UBC core domain-containing protein n=31 Tax=Peronosporaceae TaxID=4777 RepID=H3G861_PHYRM)

HSP 1 Score: 233 bits (595), Expect = 1.070e-73
Identity = 104/150 (69.33%), Postives = 131/150 (87.33%), Query Frame = 0

Query:    7 SKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGTWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYENRIRECVRLHASDPVHL 156
            +KRR+TD+MKLMMSD+EVH+ DE+   D  + F GP+DTPY+GG+WK+HVTLPK+YPFKSPSIGF NR++HPNVDE SGSVCLDVINQTWSPMF+LVNIF +FIPQLL YPNP+DPLNGEAA+LLM+D ++Y  +++E VR +AS P+ +
Sbjct:    5 NKRRETDVMKLMMSDYEVHLTDETKTSDLDIKFNGPKDTPYEGGSWKIHVTLPKDYPFKSPSIGFMNRIYHPNVDETSGSVCLDVINQTWSPMFELVNIFDVFIPQLLRYPNPSDPLNGEAASLLMKDAESYNRKVKEYVRNYASQPIEM 154

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BLAST of mRNA_C-linearis_contig8.15592.1 vs. uniprot
Match: A0A8K1C4X5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4X5_PYTOL)

HSP 1 Score: 233 bits (593), Expect = 2.230e-73
Identity = 105/152 (69.08%), Postives = 132/152 (86.84%), Query Frame = 0

Query:    5 SPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGTWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYENRIRECVRLHASDPVHL 156
            S +KRR+TD+MKLMMSD+EV + DE+  +DF V F GP +TPY+GG WK+HV+LPKEYPFKSPSIGF NR++HPNVD+MSGSVCLDVINQTWSPMF+LVN+F++FIPQLL YPNP+DPLNGEAA+LLM+D  AY  +++E VR +AS P+ +
Sbjct:    3 SMNKRRETDVMKLMMSDYEVQLTDETKTNDFHVKFHGPAETPYEGGVWKIHVSLPKEYPFKSPSIGFVNRIYHPNVDDMSGSVCLDVINQTWSPMFELVNVFEVFIPQLLRYPNPSDPLNGEAASLLMKDADAYNAKVKEYVRNYASQPIDM 154

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BLAST of mRNA_C-linearis_contig8.15592.1 vs. uniprot
Match: A0A7S3XS74_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XS74_HETAK)

HSP 1 Score: 237 bits (604), Expect = 2.700e-73
Identity = 109/150 (72.67%), Postives = 130/150 (86.67%), Query Frame = 0

Query:    2 LSMSPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGTWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYENRIRECVRLHAS 151
            LS SPSKRRD D+++LMMSD+EV +PDE  ++DF VAF GPE TPY+GG W VHVTLP EYP+KSPSIGF NR+FHPNVD+MSGSVCLDVINQTWSPMFDL+NIF++F+PQLL  PNPTDPLNGEAAALL+RDP+AY  +++  V  +AS
Sbjct:   80 LSSSPSKRRDNDLVRLMMSDYEVTLPDEDKIYDFHVAFHGPEKTPYEGGVWDVHVTLPPEYPYKSPSIGFSNRLFHPNVDDMSGSVCLDVINQTWSPMFDLINIFEVFLPQLLQDPNPTDPLNGEAAALLLRDPEAYRAKVQAYVHRYAS 229

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BLAST of mRNA_C-linearis_contig8.15592.1 vs. uniprot
Match: K3WGM6_GLOUD (UBC core domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WGM6_GLOUD)

HSP 1 Score: 231 bits (590), Expect = 6.120e-73
Identity = 105/153 (68.63%), Postives = 134/153 (87.58%), Query Frame = 0

Query:    5 SPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGTWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYENRIRECVRLHASDPVHLD 157
            S ++RR+TD+MKLMMSD+EV + DES   DF V F GP+D+PY+GG+WK+HV+LP+EYPFKSPSIGF NR++HPNVD+MSGSVCLDVINQTWSPMF+L+N+F +FIPQLL YPNP+DPLNGEAA+LLM+D ++Y N++RE VR +AS   H+D
Sbjct:    3 SMNRRRETDVMKLMMSDYEVQLTDESKTSDFHVKFHGPKDSPYEGGSWKIHVSLPREYPFKSPSIGFVNRIYHPNVDDMSGSVCLDVINQTWSPMFELLNVFDVFIPQLLRYPNPSDPLNGEAASLLMKDAESYNNKVREYVRTYASQ--HID 153

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig8.15592.1 vs. uniprot

BLAST of mRNA_C-linearis_contig8.15592.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G096_ECTSI	1.090e-111	98.16	Ubiquitin-conjugating enzyme type E2 n=1 Tax=Ectoc...	[more]
A0A835Z4W6_9STRA	2.920e-86	80.39	Ubiquitin-conjugating enzyme/RWD-like protein n=1 ...	[more]
A0A7S2AI60_9STRA	1.810e-78	76.32	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A7S2W0L0_9STRA	1.840e-76	71.52	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S2BA17_9STRA	2.960e-76	74.68	Hypothetical protein n=1 Tax=Florenciella parvula ...	[more]
A0A2D4C6N9_PYTIN	1.640e-75	71.24	Ubiquitin-conjugating enzyme E2, putative n=1 Tax=...	[more]
H3G861_PHYRM	1.070e-73	69.33	UBC core domain-containing protein n=31 Tax=Perono...	[more]
A0A8K1C4X5_PYTOL	2.230e-73	69.08	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A7S3XS74_HETAK	2.700e-73	72.67	Hypothetical protein n=4 Tax=Heterosigma akashiwo ...	[more]
K3WGM6_GLOUD	6.120e-73	68.63	UBC core domain-containing protein n=2 Tax=Pythiac...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 6..151 e-value: 7.4E-47 score: 171.7
None	No IPR available	PANTHER	PTHR24068:SF142		coord: 4..151
None	No IPR available	PANTHER	PTHR24068	FAMILY NOT NAMED	coord: 4..151
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10		coord: 5..155 e-value: 2.1E-54 score: 185.2
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 8..150
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 13..145 e-value: 2.2E-38 score: 131.1
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBIQUITIN_CONJUGAT_2	coord: 28..140 score: 33.046
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBIQUITIN_CONJUGAT_1	coord: 76..92

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig8	contig	C-linearis_contig8:1643888..1647653 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig8.15592.1	mRNA_C-linearis_contig8.15592.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig8 1643346..1648503 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig8.15592.1 ID=prot_C-linearis_contig8.15592.1|Name=mRNA_C-linearis_contig8.15592.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=322bp
MLSMSPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGG
TWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMF
DLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYENRIRECVRLHA
SDPVHLDGTPVAVAVVPPPATTTNTNTNSNTNTAAAAAGNTSSSGGGAAA
SSRSSGSGSDESDVSSSFDEQPAVSSANATDGANGTNNNNNHNAAADKKE
GEDDDATMGEAPVTGTAVGTAGEAKRRVAVPGNNDAADGGASSSRSSSGS
DFMMEMEMDETSSDVSVLSDV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016135	UBQ-conjugating_enzyme/RWD
IPR000608	UBQ-conjugat_E2
IPR023313	UBQ-conjugating_AS