prot_C-linearis_contig8.15582.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15582.1
Unique Nameprot_C-linearis_contig8.15582.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length205
Homology
BLAST of mRNA_C-linearis_contig8.15582.1 vs. uniprot
Match: D7G0A4_ECTSI (Rab8A, RAB family GTPase n=2 Tax=Phaeophyceae TaxID=2870 RepID=D7G0A4_ECTSI)

HSP 1 Score: 366 bits (940), Expect = 1.630e-127
Identity = 189/207 (91.30%), Postives = 195/207 (94.20%), Query Frame = 0
Query:    1 MSRNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMEEDREVSKEEGAQLAAEYGIQFFETSAKEDKNVEKGFITIAREVKDRLMADGPHQKPGER--GNVNLTTK-NTKKAGCC 204
            MSRN+SPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDM+EDREVS+EEGAQLAAEYGIQFFETSAK D NVEKGFITIAREVKDRLMADGP+  PG R  GNVNL  + + KK GCC
Sbjct:    1 MSRNESPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPN--PGSRAAGNVNLNAQASKKKTGCC 205          
BLAST of mRNA_C-linearis_contig8.15582.1 vs. uniprot
Match: A0A836CCB2_9STRA (Rab8A, rab family GTPase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCB2_9STRA)

HSP 1 Score: 338 bits (866), Expect = 3.190e-116
Identity = 171/206 (83.01%), Postives = 186/206 (90.29%), Query Frame = 0
Query:    1 MSRNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMEEDREVSKEEGAQLAAEYGIQFFETSAKEDKNVEKGFITIAREVKDRLMADGPHQKPGERGNVNLTT--KNTKKAGCC 204
            M+R++SPFDMQIKLLMIGDSGVGKTCLLLRYA+D FSQTFITTIGIDFKIKNI+LD+KR+KLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSF SIRNWVAQIQQHADV VNKILIGNKCD++ +REVS EEGAQLAAEYGIQFFETSAK D NVEKGFIT+AREVK+RLMADG  Q    +GNV L+   K  KK+ CC
Sbjct:    1 MARHESPFDMQIKLLMIGDSGVGKTCLLLRYASDHFSQTFITTIGIDFKIKNIELDTKRVKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFQSIRNWVAQIQQHADVHVNKILIGNKCDIDNEREVSTEEGAQLAAEYGIQFFETSAKNDINVEKGFITVAREVKNRLMADGGSQGARTQGNVALSAPAKGGKKSSCC 206          
BLAST of mRNA_C-linearis_contig8.15582.1 vs. uniprot
Match: A0A024TZG5_9STRA (Uncharacterized protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TZG5_9STRA)

HSP 1 Score: 314 bits (805), Expect = 7.450e-107
Identity = 160/211 (75.83%), Postives = 176/211 (83.41%), Query Frame = 0
Query:    1 MSRNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMEEDREVSKEEGAQLAAEYGIQFFETSAKEDKNVEKGFITIAREVKDRLMADG-PHQKP------GERGNVNLTTKNTKKAGCC 204
            M+RN++PFDMQIKLLMIGDSGVGKTCLLLRYANDSFS TFITTIGIDFK+KNIDLD K+IKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SFNSIRNWV QIQQHADV VNKIL+GNKCDM +D+ VS EEG  LA EYG++FFETSAK + NVE GFI IA EVK RLM +G PH+K       G++GN      N  K GCC
Sbjct:    1 MARNENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKVKNIDLDGKKIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFNSIRNWVGQIQQHADVHVNKILVGNKCDMLDDKVVSTEEGQALADEYGVKFFETSAKNNINVEGGFIEIANEVKTRLMEEGGPHKKSDLVVNLGKKGNDPTKASNGGKGGCC 211          
BLAST of mRNA_C-linearis_contig8.15582.1 vs. uniprot
Match: K3WPX9_GLOUD (Uncharacterized protein n=28 Tax=Oomycota TaxID=4762 RepID=K3WPX9_GLOUD)

HSP 1 Score: 312 bits (799), Expect = 4.470e-106
Identity = 160/206 (77.67%), Postives = 178/206 (86.41%), Query Frame = 0
Query:    1 MSRNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMEEDREVSKEEGAQLAAEYGIQFFETSAKEDKNVEKGFITIAREVKDRLMADG-PHQKPGERGNVNLTTKNTK-KAGCC 204
            M+R+++PFDMQIKLLMIGDSGVGKTCLLLRYANDSFS TFITTIGIDFKIKNI+LD+K++KLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SF SIRNWV QIQQHADV VNKILIGNKCDM +D+ VS EEG  LA EYG++FFETSAK + NVE GFI IAREVK+RLM +G PH+K     NVNL+ K    K GCC
Sbjct:    1 MARHENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNIELDNKKVKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFQSIRNWVGQIQQHADVHVNKILIGNKCDMTDDKVVSTEEGQALADEYGVKFFETSAKNNINVESGFIEIAREVKNRLMEEGGPHKKE----NVNLSAKPAAPKKGCC 202          
BLAST of mRNA_C-linearis_contig8.15582.1 vs. uniprot
Match: A0A4D9D279_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D279_9STRA)

HSP 1 Score: 306 bits (783), Expect = 1.260e-103
Identity = 154/204 (75.49%), Postives = 171/204 (83.82%), Query Frame = 0
Query:    1 MSRNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMEEDREVSKEEGAQLAAEYGIQFFETSAKEDKNVEKGFITIAREVKDRLMADGPHQKPGERGNVNLTTKNTKKAGCC 204
            M+R ++PFDMQIKLLMIGDSGVGKTCLLLRYANDSFS TFITTIGIDFKIKN++LD +RIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD++SF SIRNWV QIQQHADV VNKILIGNKCDM   R VS EEG  LA ++GIQFFETSAK D NVEK F+TIAREVK+R++ DG  +  G +  V+    N  K  CC
Sbjct:    1 MARQENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGRRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVSTEEGQSLANDFGIQFFETSAKNDINVEKSFVTIAREVKNRMLVDGGPRATGGKAIVDAKRSNEAKK-CC 203          
BLAST of mRNA_C-linearis_contig8.15582.1 vs. uniprot
Match: A0A7S2V1J6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1J6_9STRA)

HSP 1 Score: 304 bits (779), Expect = 3.890e-103
Identity = 156/196 (79.59%), Postives = 168/196 (85.71%), Query Frame = 0
Query:   10 MQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMEEDREVSKEEGAQLAAEYGIQFFETSAKEDKNVEKGFITIAREVKDRLMAD-GPHQKPGERGNVNLTTKNTKKAGCC 204
            MQIKLLMIGDSGVGKTCLLLRYAN SFSQTFITTIGIDFKIK IDLD KRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+KSFNSIRNW++QIQQHADV VNKIL GNKCDM E+R V+ EEG +LA+EYGI FFE SAK D NVE  F+TIAREVKDRL+ D G   + GER N+    K  KK+GCC
Sbjct:    1 MQIKLLMIGDSGVGKTCLLLRYANSSFSQTFITTIGIDFKIKTIDLDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRKSFNSIRNWISQIQQHADVHVNKILCGNKCDMSEERAVTTEEGQKLASEYGIGFFEASAKNDVNVETSFVTIAREVKDRLLLDVGTMARGGERVNLG-NAKPAKKSGCC 195          
BLAST of mRNA_C-linearis_contig8.15582.1 vs. uniprot
Match: A0A3R7WE67_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7WE67_9STRA)

HSP 1 Score: 305 bits (780), Expect = 7.220e-103
Identity = 161/214 (75.23%), Postives = 178/214 (83.18%), Query Frame = 0
Query:    1 MSRNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQ--IWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMEEDREVSKEEGAQLAAEYGIQFFETSAKEDKNVEKGFITIAREVKDRLMADG-PHQKP------GERGNVNLTTK-NTKKAGCC 204
            M+RN++PFDMQIKLLMIGDSGVGKTCLLLRYANDSFS TFITTIGIDFK+KNIDLD K+IKLQ  IWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SFNSIRNWV QIQQHADV VNKIL+GNKCDM +D+ VS EEG  LA EYGI+FFETSAK + NVE GFI IA EVK RLM +G PH+K       G++G+ + T   N  K GCC
Sbjct:   10 MARNENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKVKNIDLDGKKIKLQVDIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFNSIRNWVGQIQQHADVHVNKILVGNKCDMLDDKVVSTEEGQALADEYGIKFFETSAKNNINVEGGFIEIANEVKTRLMEEGGPHKKNDLVVNLGKKGSNDPTKAGNGGKGGCC 223          
BLAST of mRNA_C-linearis_contig8.15582.1 vs. uniprot
Match: A0A7S2RB79_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RB79_9STRA)

HSP 1 Score: 301 bits (772), Expect = 5.980e-102
Identity = 153/197 (77.66%), Postives = 166/197 (84.26%), Query Frame = 0
Query:    8 FDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMEEDREVSKEEGAQLAAEYGIQFFETSAKEDKNVEKGFITIAREVKDRLMADGPHQKPGERGNVNLTTKNTKKAGCC 204
            FDMQIKLLMIGDSGVGKTCLLLRYANDSFS TFITTIGIDFKIKNI+LD+KRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SF SIRNWV+QIQQHADV VNKILIGNKCDME+ R VS +EG +LA EYGIQFFETSAK D  V+ GF+ IAREVK+RL+ADGP        N +     +K   CC
Sbjct:    7 FDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNIELDNKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRTSFTSIRNWVSQIQQHADVHVNKILIGNKCDMEDQRMVSFDEGKKLAQEYGIQFFETSAKNDIEVDSGFVAIAREVKNRLIADGPTAVRSGIHNPSHQNNKSKGRACC 203          
BLAST of mRNA_C-linearis_contig8.15582.1 vs. uniprot
Match: A0A6T5Q365_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5Q365_HETAK)

HSP 1 Score: 301 bits (771), Expect = 9.420e-102
Identity = 152/203 (74.88%), Postives = 173/203 (85.22%), Query Frame = 0
Query:    1 MSRNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMEEDREVSKEEGAQLAAEYGIQFFETSAKEDKNVEKGFITIAREVKDRLMADGPHQKPGERGNVNLTTKNTKKAGC 203
            M+R+++ +DMQIKLLMIGDSGVGKTCLLLRYAN +FSQTFITTIGIDFKIKNI LD KRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD+ SFNSIRNWV+QIQQHADV VNKILIGNKCDM+++R V+ EEG +LAAEYGIQFFETSAK D  VE+ F+T+AREVK+RL+ D   +       VNL T+ +    C
Sbjct:    1 MARHENAYDMQIKLLMIGDSGVGKTCLLLRYANAAFSQTFITTIGIDFKIKNITLDGKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRNSFNSIRNWVSQIQQHADVHVNKILIGNKCDMKDERVVTTEEGQKLAAEYGIQFFETSAKNDIQVEESFVTVAREVKERLINDVDRKTDAR---VNLQTQKSSSKSC 200          
BLAST of mRNA_C-linearis_contig8.15582.1 vs. uniprot
Match: W7TKL6_9STRA (Rab gtpase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKL6_9STRA)

HSP 1 Score: 304 bits (778), Expect = 1.670e-101
Identity = 152/200 (76.00%), Postives = 169/200 (84.50%), Query Frame = 0
Query:    1 MSRNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCDMEEDREVSKEEGAQLAAEYGIQFFETSAKEDKNVEKGFITIAREVKDRLMADGPHQKPGERGNVNLTTKNTKK 200
            M+R ++PFDMQIKLLMIGDSGVGKTCLLLRYANDSFS TFITTIGIDFKIKN++LD +RIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTD++SF SIRNWV QIQQHADV VNKILIGNKCDM   R VS EEG  LA ++GIQFFETSAK D NVEK F+TIAREVK+R++ DG  +  G +  V+    N  K
Sbjct:    1 MARQENPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNLELDGRRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWVGQIQQHADVHVNKILIGNKCDMTPQRVVSTEEGQSLANDFGIQFFETSAKNDINVEKSFVTIAREVKNRMLVDGGPRATGGKAIVDAKRSNEAK 200          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15582.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0A4_ECTSI1.630e-12791.30Rab8A, RAB family GTPase n=2 Tax=Phaeophyceae TaxI... [more]
A0A836CCB2_9STRA3.190e-11683.01Rab8A, rab family GTPase n=2 Tax=Tribonema minus T... [more]
A0A024TZG5_9STRA7.450e-10775.83Uncharacterized protein n=7 Tax=Saprolegniaceae Ta... [more]
K3WPX9_GLOUD4.470e-10677.67Uncharacterized protein n=28 Tax=Oomycota TaxID=47... [more]
A0A4D9D279_9STRA1.260e-10375.49Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2V1J6_9STRA3.890e-10379.59Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A3R7WE67_9STRA7.220e-10375.23Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
A0A7S2RB79_9STRA5.980e-10277.66Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6T5Q365_HETAK9.420e-10274.88Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7TKL6_9STRA1.670e-10176.00Rab gtpase n=1 Tax=Nannochloropsis gaditana TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 53..75
score: 54.58
coord: 35..51
score: 33.09
coord: 150..172
score: 43.14
coord: 115..128
score: 43.7
coord: 12..33
score: 50.82
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 12..175
e-value: 3.4E-97
score: 338.9
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 13..175
e-value: 1.2E-37
score: 141.0
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 1..176
e-value: 0.0019
score: 4.3
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 17..203
e-value: 1.8E-5
score: 28.5
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 14..175
e-value: 4.0E-12
score: 35.5
NoneNo IPR availableGENE3D3.40.50.300coord: 6..204
e-value: 4.1E-70
score: 237.2
NoneNo IPR availablePANTHERPTHR24073:SF978coord: 1..187
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 1..187
NoneNo IPR availablePROSITEPS51419RABcoord: 7..204
score: 35.66
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 11..166
e-value: 3.5E-29
score: 99.6
IPR001806Small GTPasePFAMPF00071Rascoord: 13..173
e-value: 1.5E-65
score: 219.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 9..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:1560388..1568916 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15582.1mRNA_C-linearis_contig8.15582.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 1560141..1568916 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15582.1 ID=prot_C-linearis_contig8.15582.1|Name=mRNA_C-linearis_contig8.15582.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=205bp
MSRNDSPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKI
KNIDLDSKRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFN
SIRNWVAQIQQHADVAVNKILIGNKCDMEEDREVSKEEGAQLAAEYGIQF
FETSAKEDKNVEKGFITIAREVKDRLMADGPHQKPGERGNVNLTTKNTKK
AGCC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
IPR027417P-loop_NTPase