prot_C-linearis_contig8.15545.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15545.1
Unique Nameprot_C-linearis_contig8.15545.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length76
Homology
BLAST of mRNA_C-linearis_contig8.15545.1 vs. uniprot
Match: A0A813W3T9_9BILA (Hypothetical protein n=2 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A813W3T9_9BILA)

HSP 1 Score: 120 bits (300), Expect = 4.910e-34
Identity = 53/73 (72.60%), Postives = 64/73 (87.67%), Query Frame = 0
Query:    1 MLKRNSCGKALDTARQARDLLGANGISDEYHVMRHMMNLESVNTYEGTHDVHALVLDRAITGIPAFRPGFRSP 73
            ++KRNSCGK+LD ARQ RD+LGANGISDEYH++RH+MNLE+VNTYEGTHD+HAL+L RAITG+PAF      P
Sbjct:    4 LIKRNSCGKSLDIARQCRDILGANGISDEYHIIRHVMNLEAVNTYEGTHDIHALILGRAITGLPAFAASTSKP 76          
BLAST of mRNA_C-linearis_contig8.15545.1 vs. uniprot
Match: UPI000549BB28 (glutaryl-CoA dehydrogenase, mitochondrial-like n=2 Tax=Phasianidae TaxID=9005 RepID=UPI000549BB28)

HSP 1 Score: 118 bits (296), Expect = 2.060e-33
Identity = 54/69 (78.26%), Postives = 62/69 (89.86%), Query Frame = 0
Query:    1 MLKRNSCGKALDTARQARDLLGANGISDEYHVMRHMMNLESVNTYEGTHDVHALVLDRAITGIPAFRPG 69
            MLKRNSCGKAL+ ARQARD+LG NG+ DEYHV+RH+MNLE+VNTYEGTHD+HAL+L RAITGI AF  G
Sbjct:    4 MLKRNSCGKALEIARQARDMLGGNGVCDEYHVIRHLMNLEAVNTYEGTHDIHALILGRAITGIQAFTAG 72          
BLAST of mRNA_C-linearis_contig8.15545.1 vs. uniprot
Match: UPI0015A50911 (glutaryl-CoA dehydrogenase, mitochondrial-like n=1 Tax=Oxyura jamaicensis TaxID=8884 RepID=UPI0015A50911)

HSP 1 Score: 118 bits (295), Expect = 2.920e-33
Identity = 53/69 (76.81%), Postives = 62/69 (89.86%), Query Frame = 0
Query:    1 MLKRNSCGKALDTARQARDLLGANGISDEYHVMRHMMNLESVNTYEGTHDVHALVLDRAITGIPAFRPG 69
            MLKRNSCGKALD ARQARD+LG NG+ DEYHV+RH++NLE+VNTYEGTHD+HAL+L RAITG+ AF  G
Sbjct:    4 MLKRNSCGKALDIARQARDMLGGNGVCDEYHVIRHLLNLEAVNTYEGTHDIHALILGRAITGLQAFTAG 72          
BLAST of mRNA_C-linearis_contig8.15545.1 vs. uniprot
Match: UPI002009504B (glutaryl-CoA dehydrogenase, mitochondrial n=1 Tax=Anser cygnoid TaxID=8845 RepID=UPI002009504B)

HSP 1 Score: 117 bits (293), Expect = 5.270e-33
Identity = 52/69 (75.36%), Postives = 63/69 (91.30%), Query Frame = 0
Query:    1 MLKRNSCGKALDTARQARDLLGANGISDEYHVMRHMMNLESVNTYEGTHDVHALVLDRAITGIPAFRPG 69
            MLKRNSCGKAL+ ARQARD+LG NG+SDE+HV+RH++NLE+VNTYEGTHD+HAL+L RAITG+ AF  G
Sbjct:    1 MLKRNSCGKALEVARQARDMLGGNGVSDEFHVIRHLLNLEAVNTYEGTHDIHALILGRAITGLQAFAAG 69          
BLAST of mRNA_C-linearis_contig8.15545.1 vs. uniprot
Match: A0A7S2LIR6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LIR6_9STRA)

HSP 1 Score: 120 bits (300), Expect = 5.520e-33
Identity = 53/68 (77.94%), Postives = 62/68 (91.18%), Query Frame = 0
Query:    1 MLKRNSCGKALDTARQARDLLGANGISDEYHVMRHMMNLESVNTYEGTHDVHALVLDRAITGIPAFRP 68
            M+KRNSCGK+LD  RQ RD+LG NGISDEYH++RHMMNLE+VNTYEGTHD+HAL+L RAITGIP+F P
Sbjct:   88 MIKRNSCGKSLDIVRQCRDMLGGNGISDEYHIIRHMMNLEAVNTYEGTHDIHALILGRAITGIPSFVP 155          
BLAST of mRNA_C-linearis_contig8.15545.1 vs. uniprot
Match: UPI00071D66E3 (glutaryl-CoA dehydrogenase, mitochondrial-like n=2 Tax=Calidris pugnax TaxID=198806 RepID=UPI00071D66E3)

HSP 1 Score: 117 bits (292), Expect = 8.390e-33
Identity = 54/75 (72.00%), Postives = 62/75 (82.67%), Query Frame = 0
Query:    1 MLKRNSCGKALDTARQARDLLGANGISDEYHVMRHMMNLESVNTYEGTHDVHALVLDRAITGIPAFRPGFRSPPE 75
            MLKRNSCGKAL  AR+ARD+LG NG+ DEYHV+RH+MNLE+VNTYEGTHD+HAL+L RAITGI AF P     P 
Sbjct:    4 MLKRNSCGKALAIAREARDMLGGNGVCDEYHVIRHLMNLEAVNTYEGTHDIHALILGRAITGIQAFAPSKSPAPR 78          
BLAST of mRNA_C-linearis_contig8.15545.1 vs. uniprot
Match: A0A3S5CPU9_9PLAT (Hypothetical protein n=1 Tax=Protopolystoma xenopodis TaxID=117903 RepID=A0A3S5CPU9_9PLAT)

HSP 1 Score: 116 bits (291), Expect = 1.500e-32
Identity = 52/66 (78.79%), Postives = 62/66 (93.94%), Query Frame = 0
Query:    1 MLKRNSCGKALDTARQARDLLGANGISDEYHVMRHMMNLESVNTYEGTHDVHALVLDRAITGIPAF 66
            ++KRNSCGKALD AR ARD+LGANGISDEYHV+RHMMNLE+VNTYEGTHD+HAL+L R+ITG+ +F
Sbjct:   21 LIKRNSCGKALDAARLARDILGANGISDEYHVIRHMMNLEAVNTYEGTHDIHALILGRSITGLQSF 86          
BLAST of mRNA_C-linearis_contig8.15545.1 vs. uniprot
Match: A0A1B6IAL0_9HEMI (Acyl-CoA_dh_1 domain-containing protein (Fragment) n=6 Tax=Cicadellinae TaxID=33370 RepID=A0A1B6IAL0_9HEMI)

HSP 1 Score: 118 bits (296), Expect = 1.730e-32
Identity = 54/66 (81.82%), Postives = 62/66 (93.94%), Query Frame = 0
Query:    1 MLKRNSCGKALDTARQARDLLGANGISDEYHVMRHMMNLESVNTYEGTHDVHALVLDRAITGIPAF 66
            +LKRNSCGKAL+ AR ARD+LG NGISDEYH++RH+MNLE+VNTYEGTHD+HALVL RAITGIPAF
Sbjct:   84 LLKRNSCGKALEIARVARDMLGGNGISDEYHIIRHVMNLEAVNTYEGTHDIHALVLGRAITGIPAF 149          
BLAST of mRNA_C-linearis_contig8.15545.1 vs. uniprot
Match: UPI000F691D15 (glutaryl-CoA dehydrogenase, mitochondrial-like n=1 Tax=Penaeus vannamei TaxID=6689 RepID=UPI000F691D15)

HSP 1 Score: 117 bits (292), Expect = 1.950e-32
Identity = 52/66 (78.79%), Postives = 61/66 (92.42%), Query Frame = 0
Query:    1 MLKRNSCGKALDTARQARDLLGANGISDEYHVMRHMMNLESVNTYEGTHDVHALVLDRAITGIPAF 66
            +LKRNSCGKALD ARQ RD+LG NGISDEYH++RH+MNLE+VNTYEGTHD+HAL+L RAITG+ AF
Sbjct:   40 LLKRNSCGKALDIARQTRDMLGGNGISDEYHIIRHVMNLEAVNTYEGTHDIHALILGRAITGLQAF 105          
BLAST of mRNA_C-linearis_contig8.15545.1 vs. uniprot
Match: A0A7S3DYI6_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DYI6_9STRA)

HSP 1 Score: 118 bits (296), Expect = 2.500e-32
Identity = 54/68 (79.41%), Postives = 63/68 (92.65%), Query Frame = 0
Query:    1 MLKRNSCGKALDTARQARDLLGANGISDEYHVMRHMMNLESVNTYEGTHDVHALVLDRAITGIPAFRP 68
            ++KRN+CGKAL+ AR ARD+LG NGISDEYHV+RH+MNLE+VNTYEGTHDVHAL+L RAITGIPAF P
Sbjct:   95 VVKRNNCGKALEMARTARDMLGGNGISDEYHVIRHVMNLEAVNTYEGTHDVHALILGRAITGIPAFTP 162          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15545.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A813W3T9_9BILA4.910e-3472.60Hypothetical protein n=2 Tax=Rotaria sp. Silwood1 ... [more]
UPI000549BB282.060e-3378.26glutaryl-CoA dehydrogenase, mitochondrial-like n=2... [more]
UPI0015A509112.920e-3376.81glutaryl-CoA dehydrogenase, mitochondrial-like n=1... [more]
UPI002009504B5.270e-3375.36glutaryl-CoA dehydrogenase, mitochondrial n=1 Tax=... [more]
A0A7S2LIR6_9STRA5.520e-3377.94Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
UPI00071D66E38.390e-3372.00glutaryl-CoA dehydrogenase, mitochondrial-like n=2... [more]
A0A3S5CPU9_9PLAT1.500e-3278.79Hypothetical protein n=1 Tax=Protopolystoma xenopo... [more]
A0A1B6IAL0_9HEMI1.730e-3281.82Acyl-CoA_dh_1 domain-containing protein (Fragment)... [more]
UPI000F691D151.950e-3278.79glutaryl-CoA dehydrogenase, mitochondrial-like n=1... [more]
A0A7S3DYI6_9STRA2.500e-3279.41Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009075Acyl-CoA dehydrogenase/oxidase C-terminalPFAMPF00441Acyl-CoA_dh_1coord: 1..60
e-value: 4.7E-7
score: 30.1
NoneNo IPR availableGENE3D1.20.140.10coord: 1..69
e-value: 1.1E-12
score: 50.1
NoneNo IPR availablePANTHERPTHR42807:SF1GLUTARYL-COA DEHYDROGENASE, MITOCHONDRIALcoord: 1..67
NoneNo IPR availablePANTHERPTHR42807FAMILY NOT NAMEDcoord: 1..67
IPR036250Acyl-CoA dehydrogenase-like, C-terminalSUPERFAMILY47203Acyl-CoA dehydrogenase C-terminal domain-likecoord: 1..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:1206615..1209295 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15545.1mRNA_C-linearis_contig8.15545.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 1205847..1214124 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15545.1 ID=prot_C-linearis_contig8.15545.1|Name=mRNA_C-linearis_contig8.15545.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=76bp
MLKRNSCGKALDTARQARDLLGANGISDEYHVMRHMMNLESVNTYEGTHD
VHALVLDRAITGIPAFRPGFRSPPE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009075AcylCo_DH/oxidase_C
IPR036250AcylCo_DH-like_C