prot_C-linearis_contig8.15544.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15544.1
Unique Nameprot_C-linearis_contig8.15544.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length317
Homology
BLAST of mRNA_C-linearis_contig8.15544.1 vs. uniprot
Match: D8LCB7_ECTSI (All0748 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCB7_ECTSI)

HSP 1 Score: 377 bits (969), Expect = 3.140e-128
Identity = 238/325 (73.23%), Postives = 266/325 (81.85%), Query Frame = 0
Query:    1 MGRESVAALFA--VAVLSQQTASFHVPASPATSARSLQHH-PHPTASPYRPHQH-PLLPSRSLRWSPLAAEXXXXXXXXXSSGEGGEKLSRK--AAKKAKARGGAGPAVELKKVAGEQ--QVSKSLVAEVLGAQVGKEGGSTADQVAARKEIERMEAEERERKAKRQERIDSVLKANEATEGDPDAGSIPQIVADRMLSRMVPFFMLPALGGVGVFVAVYVLSHQYDYTIPAYIVAYATQAPFFVALSGITYAILSASWDEDREGTFFGFEEAKRNFGNIMEGLRRSSDRMDVEDLLADQEQMNMNRRQRRLMRKEEG-DDEPGA 316
            MGR+S  A  A  VA+LS+Q+  FH+PA+  +S RSLQ   PH            P LP+RSL   PLAAE  XXXXXXX              AAKKAKARGGAGPAVELKK A +Q  +VSKS+VAEVLGAQ  KEGG+TADQV+ARKEIERMEAEERER AKRQERIDSV++A  ATEGDPDAGSIP+IV++RMLSRMVPFF+LPALGGVGVFV VYVLSH+YDYTIPAYIVAYATQAPFFVAL+GITYAI+SASWDEDREGTFFGF+EAKRNFGNI+EGLRRSSDRMDVED+LADQE+M+MNRRQRR MRKE+G DDEP A
Sbjct:    1 MGRDSALAAVALVVALLSRQSLGFHIPAT--SSRRSLQQRSPHSAXXXXXXXXXXPTLPTRSLLRFPLAAEADXXXXXXXXXXXXXXXXXXXXXAAKKAKARGGAGPAVELKKAANKQPQEVSKSVVAEVLGAQAAKEGGATADQVSARKEIERMEAEERERIAKRQERIDSVMQAKAATEGDPDAGSIPEIVSNRMLSRMVPFFVLPALGGVGVFVTVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRSSDRMDVEDMLADQERMSMNRRQRRQMRKEDGGDDEPAA 323          
BLAST of mRNA_C-linearis_contig8.15544.1 vs. uniprot
Match: A0A6H5L0S3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0S3_9PHAE)

HSP 1 Score: 336 bits (861), Expect = 6.730e-112
Identity = 215/304 (70.72%), Postives = 237/304 (77.96%), Query Frame = 0
Query:    1 MGRESVAALFAVAV--LSQQTASFHVPASPATSARSLQ----HHPHPTASPYRPHQHPLLPSRSLRWSPLAAEXXXXXXXXXSSGEGGEKLSRKAAKKAKARGGAGPAVELKKVAGEQ--QVSKSLVAEVLGAQVGKEGGSTADQVAARKEIERMEAEERERKAKRQERIDSVLKANEATEGDPDAGSIPQIVADRMLSRMVPFFMLPALGGVGVFVAVYVLSHQYDYTIPAYIVAYATQAPFFVALSGITYAILSASWDEDREGTFFGFEEAKRNFGNIMEGLRRSSDRMDVEDLLADQEQMN 296
            MGR+S  A  AVAV  LS+Q   FH+PA  A+S RSLQ    H                              XXXXXXXXX         SRKA+KKAKARGGAGPAVELKK A +Q  +VSKS+VAEVLGAQ  KEGGSTADQV+ARK IERMEAEERER AKRQERIDSV++A  ATEGDPDAGSIP+IV++RMLSRMVPFF+LPALGGVGVFVAVYVLSH+YDYTIPAYIVAYATQAPFFVAL+GITYAI+SASWDEDREGTFFGF+EAKRNFGNI+EGLRRSSDRMDVED+LADQ + N
Sbjct:    1 MGRDSALAAVAVAVALLSRQGLGFHIPA--ASSRRSLQQRSPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRKASKKAKARGGAGPAVELKKAANKQPQEVSKSVVAEVLGAQAAKEGGSTADQVSARKAIERMEAEERERIAKRQERIDSVMQAKAATEGDPDAGSIPEIVSNRMLSRMVPFFLLPALGGVGVFVAVYVLSHKYDYTIPAYIVAYATQAPFFVALAGITYAIMSASWDEDREGTFFGFDEAKRNFGNIVEGLRRSSDRMDVEDMLADQARAN 302          
BLAST of mRNA_C-linearis_contig8.15544.1 vs. uniprot
Match: A0A835Z7Y5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Y5_9STRA)

HSP 1 Score: 153 bits (387), Expect = 3.230e-41
Identity = 90/175 (51.43%), Postives = 132/175 (75.43%), Query Frame = 0
Query:  139 AARKEIERMEAEERERKAKRQERIDSVLKANEA-TEGDPDAGSIPQIVADRMLSRMVPFFMLPALGGVGVFVAVYVLSHQYDYTIPAYIVAYATQAPFFVALSGITYAILSASWDEDREGTFFGFEEAKRNFGNIMEGLRRSSDRMDVEDLLADQEQMNMNRRQRRLMRKEEGDD 312
            AA++++ RM+ EERER+ + Q++  + +KA +A T+ +PDAG IP +VA+RML+RM+PFF+LP L GVGVFV  +VL+ +YD +    +VA+ATQAPF ++L GITYAILSASWD +REG+  GF+E + N G I+EGLRRSS+R ++++ L +QE+  +NR +RR  +    DD
Sbjct:   94 AAKEDLARMK-EERERRVQAQKQRMADIKAAQAITKDNPDAGVIPDLVANRMLARMIPFFVLPVLAGVGVFVYFFVLAKRYDTSFQPGMVAFATQAPFAISLVGITYAILSASWDPEREGSALGFDEFRSNAGAILEGLRRSSERQELDEQLEEQEKR-VNRAERRRQKGGGSDD 266          
BLAST of mRNA_C-linearis_contig8.15544.1 vs. uniprot
Match: A0A6U0UN43_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0UN43_9STRA)

HSP 1 Score: 118 bits (296), Expect = 5.470e-28
Identity = 68/183 (37.16%), Postives = 106/183 (57.92%), Query Frame = 0
Query:  105 LKKVAGEQQVSKSLVAEVLGAQVGKEGGSTADQVAARKEIERMEAEERERKAKRQERIDSVLKANEATEGDPDAGSIPQIVADRMLSRMVPFFMLPALGGVGVFVAVYVLSHQYDYTIPAYIVAYATQAPFFVALSGITYAILSASWDEDREGTFFGFEEAKRNFGNIMEGLRRSSDRMDVED 287
            L++    Q+++     EV  AQ       TA Q    +E++++      + A+R  ++D  ++       +P AG IP  V+ RML RMVP F LP + G+  FVA Y    +    +   +VAY+TQAPFF+ L G++Y +LSASWDED EG+F G EE + N G + +G++R+++R D+ED
Sbjct:   62 LERAPAPQEINVGAAEEVNLAQSSARDNLTAGQ----QELQQLRQARASKDAERAAKVDMYVEERAEIRKNPRAGVIPDAVSKRMLGRMVPLFSLPFVLGIAAFVAFYFYGQKTGNQMQPTVVAYSTQAPFFLGLVGLSYGVLSASWDEDEEGSFLGIEEFQTNVGRLFDGVQRAAERRDLED 240          
BLAST of mRNA_C-linearis_contig8.15544.1 vs. uniprot
Match: A0A7S2STX2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STX2_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.020e-26
Identity = 55/123 (44.72%), Postives = 81/123 (65.85%), Query Frame = 0
Query:  159 QERIDSVLKANEATEGDPDAGSIPQIVADRMLSRMVPFFMLPALGGVGVFVAVYVLSHQYDYTIPAYIVAYATQAPFFVALSGITYAILSASWDEDREGTFFGFEEAKRNFGNIMEGLRRSSD 281
            Q R++ + +  +    +PDAG IP++VA RML RM+P   +P  GG+ +FV  Y+ + ++D  I   +VAYAT AP+ + L+G+TY ILSASWD + EG+F G EE K N   I +GLRR+ +
Sbjct:   98 QRRLEDMKEVEKVLRENPDAGVIPEVVAQRMLGRMLPLAAVPIFGGIALFVGFYIAATKWDLEIQPTVVAYATTAPWLLGLAGLTYGILSASWDPEVEGSFLGTEEVKLNLSRIADGLRRAGE 220          
BLAST of mRNA_C-linearis_contig8.15544.1 vs. uniprot
Match: A0A7S2NSH2_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2NSH2_9EUKA)

HSP 1 Score: 109 bits (273), Expect = 2.010e-24
Identity = 66/154 (42.86%), Postives = 90/154 (58.44%), Query Frame = 0
Query:  135 ADQVAARKEIERMEAEERERKAKRQERIDS-------------VLKANEATEGDPDAGSIPQIVADRMLSRMVPFFMLPALGGVGVFVAVYVLSHQYDYTIPAYIVAYATQAPFFVALSGITYAILSASWDEDREGTFFGFEEAKRNFGNIMEG 275
            A +  +RK+  R +AEER RKA    RI++              L   EA   DP AG +P++V+ RML+R+VPF  LP  GG  VFV  Y  + Q +  +P  IVAYATQ    ++ +GITY ++S SWDE++EGT  G E  KRNF ++M G
Sbjct:   86 APEAVSRKQAARSDAEERGRKALEALRIEAGAQPADPFKKAGPALTPEEAEPMDPSAGVMPEVVSQRMLNRVVPFAALPVFGGALVFVGFYYANTQLELDVPPMIVAYATQVLLLLSFAGITYGVMSTSWDEEKEGTLLGTENLKRNF-DLMRG 238          
BLAST of mRNA_C-linearis_contig8.15544.1 vs. uniprot
Match: A0A0G4F121_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F121_VITBC)

HSP 1 Score: 103 bits (258), Expect = 1.700e-22
Identity = 47/105 (44.76%), Postives = 74/105 (70.48%), Query Frame = 0
Query:  175 DPDAGSIPQIVADRMLSRMVPFFMLPALGGVGVFVAVYVLSHQYDYTIPAYIVAYATQAPFFVALSGITYAILSASWDEDREGTFFGFEEAKRNFGNIMEGLRRS 279
            D +AG++P++V+ R++SR+VPFF+ P       F+  ++L  Q+DY I   I+AY TQ  F +AL G++Y ILS+SW+EDREG+F+G +E KRN   +  G+R++
Sbjct:  113 DGNAGTMPEVVSQRIISRIVPFFLTPLAFAFSTFIGGFLLYSQFDYRIEPSIIAYITQFSFLLALGGVSYGILSSSWEEDREGSFWGADEFKRNIKRVASGVRQT 217          
BLAST of mRNA_C-linearis_contig8.15544.1 vs. uniprot
Match: R1FQ09_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FQ09_EMIHU)

HSP 1 Score: 101 bits (252), Expect = 1.330e-21
Identity = 50/111 (45.05%), Postives = 72/111 (64.86%), Query Frame = 0
Query:  168 ANEATEGDPDAGSIPQIVADRMLSRMVPFFMLPALGGVGVFVAVYVLSHQYDYTIPAYIVAYATQAPFFVALSGITYAILSASWDEDREGTFFGFEEAKRNFGNIMEGLRR 278
            A E +  DP AG +P++V++RMLSR+VPF  LP  G   VFV  Y  + Q D  +P  ++AYATQA F ++ +GIT+ +LS SWDE+ EG+  G E+  RN   + +G+ R
Sbjct:  106 AEEMSPVDPSAGVMPEVVSNRMLSRVVPFAGLPVFGSFLVFVGAYYANTQLDLDVPPQVIAYATQACFALSFAGITWGVLSTSWDEETEGSLLGTEQVGRNVAMMRDGMAR 216          
BLAST of mRNA_C-linearis_contig8.15544.1 vs. uniprot
Match: A0A7S2BKL3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BKL3_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 2.040e-20
Identity = 62/163 (38.04%), Postives = 92/163 (56.44%), Query Frame = 0
Query:  144 IERMEAEERERKAKRQERIDSVLKANEATEGDPDAGSIPQIVADRMLSRMVPFFMLPALGGVGVFVAVYVLSHQYDYTIPAYIVAYATQAPFFVALSGITYAILSASWDEDREGTFFGFEEAKRNFGNIMEGLRRSSDRMDVEDLLADQEQMN---MNRRQRR 303
            + ++ A+  E  AK  ER   + +  EA + +P AG IP+ VA+RML RM+     P  GG+G+FV  Y+ + Q+D  +   IVA AT  P+ + L+G+TY +LSASWD + EG+  G +E K N   I  G+ RS    +  +    Q++ N    NR QRR
Sbjct:   81 LTKLRAQREEDLAKADERYAELSEVQEALKENPAAGVIPEAVANRMLKRMLTLAAPPIFGGIGLFVVFYISATQWDTDVAPPIVAAATTVPWLLGLAGLTYGVLSASWDPEVEGSALGLDEFKENLKIIGAGVLRSGQDSEFREQYEYQQRKNNAPANREQRR 243          
BLAST of mRNA_C-linearis_contig8.15544.1 vs. uniprot
Match: A0A7S3U2G1_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3U2G1_9SPIT)

HSP 1 Score: 96.7 bits (239), Expect = 1.340e-19
Identity = 47/109 (43.12%), Postives = 69/109 (63.30%), Query Frame = 0
Query:  170 EATEGDPDAGSIPQIVADRMLSRMVPFFMLPALGGVGVFVAVYVLSHQYDYTIPAYIVAYATQAPFFVALSGITYAILSASWDEDREGTFFGFEEAKRNFGNIMEGLRR 278
            E T  DP AG +P+ V++RM++R++PF  LP  G   +F   Y L+ Q DY IP   +A ATQA F ++ +GIT+ ++S SWDED EG+  G E+  +N   + +GL R
Sbjct:  131 EMTPLDPTAGVMPERVSNRMIARVIPFAGLPVFGAFALFGGAYYLNTQLDYGIPPQAIALATQAMFALSFAGITWGVMSTSWDEDEEGSLLGIEQVGKNVAMMRDGLER 239          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15544.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCB7_ECTSI3.140e-12873.23All0748 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5L0S3_9PHAE6.730e-11270.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z7Y5_9STRA3.230e-4151.43Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U0UN43_9STRA5.470e-2837.16Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2STX2_9STRA1.020e-2644.72Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2NSH2_9EUKA2.010e-2442.86Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
A0A0G4F121_VITBC1.700e-2244.76Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
R1FQ09_EMIHU1.330e-2145.05Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
A0A7S2BKL3_9STRA2.040e-2038.04Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3U2G1_9SPIT1.340e-1943.12Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 139..160
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 215..225
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 193..214
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 248..316
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 226..247
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..192
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.485
NoneNo IPR availableTMHMMTMhelixcoord: 193..215
NoneNo IPR availableTMHMMTMhelixcoord: 225..247
IPR021855PAM68-likePFAMPF11947DUF3464coord: 145..278
e-value: 8.0E-32
score: 110.1
IPR021855PAM68-likePANTHERPTHR34575FAMILY NOT NAMEDcoord: 143..280

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:1201270..1204789 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15544.1mRNA_C-linearis_contig8.15544.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 1201210..1205863 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15544.1 ID=prot_C-linearis_contig8.15544.1|Name=mRNA_C-linearis_contig8.15544.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=317bp
MGRESVAALFAVAVLSQQTASFHVPASPATSARSLQHHPHPTASPYRPHQ
HPLLPSRSLRWSPLAAEEDGGGGGGFSSGEGGEKLSRKAAKKAKARGGAG
PAVELKKVAGEQQVSKSLVAEVLGAQVGKEGGSTADQVAARKEIERMEAE
ERERKAKRQERIDSVLKANEATEGDPDAGSIPQIVADRMLSRMVPFFMLP
ALGGVGVFVAVYVLSHQYDYTIPAYIVAYATQAPFFVALSGITYAILSAS
WDEDREGTFFGFEEAKRNFGNIMEGLRRSSDRMDVEDLLADQEQMNMNRR
QRRLMRKEEGDDEPGA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021855PAM68-like