prot_C-linearis_contig8.15535.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15535.1
Unique Nameprot_C-linearis_contig8.15535.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length272
Homology
BLAST of mRNA_C-linearis_contig8.15535.1 vs. uniprot
Match: D8LC93_ECTSI (CCHC-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC93_ECTSI)

HSP 1 Score: 217 bits (552), Expect = 1.840e-66
Identity = 105/108 (97.22%), Postives = 105/108 (97.22%), Query Frame = 0
Query:    1 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGPDAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHIQPVDADAPMQAVEE 108
            MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGG DAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHIQPVDA APMQAV E
Sbjct:    1 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGADAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHIQPVDAGAPMQAVAE 108          
BLAST of mRNA_C-linearis_contig8.15535.1 vs. uniprot
Match: A0A835YWX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWX5_9STRA)

HSP 1 Score: 170 bits (430), Expect = 9.710e-49
Identity = 83/98 (84.69%), Postives = 86/98 (87.76%), Query Frame = 0
Query:    1 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGG---GPDAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHIQ 95
            MPATAGRVRMPH NRVSSSSALKMTGIWTNTIGYDPYAAEGG      A D  NA+EQAQGLMALAKLSN+GVTE RGACKKCG VGHLTFQCRNH+Q
Sbjct:    1 MPATAGRVRMPHNNRVSSSSALKMTGIWTNTIGYDPYAAEGGEAAAAAAADAENAYEQAQGLMALAKLSNEGVTESRGACKKCGMVGHLTFQCRNHLQ 98          
BLAST of mRNA_C-linearis_contig8.15535.1 vs. uniprot
Match: A0A2D4C9D1_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C9D1_PYTIN)

HSP 1 Score: 144 bits (363), Expect = 3.510e-40
Identity = 73/104 (70.19%), Postives = 82/104 (78.85%), Query Frame = 0
Query:    1 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGPDAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHI----QPVDAD 100
            MPATAGRVRMPH NR+ SS+ALKMTGIW NTIGYDPYAAEG     +   +++EQA+GLMALAKLSNQG  E RGACKKCG +GHLTFQCRN +    Q V AD
Sbjct:    1 MPATAGRVRMPHNNRMHSSAALKMTGIWKNTIGYDPYAAEGEEQQGQVSQSSYEQAKGLMALAKLSNQG-NEVRGACKKCGMLGHLTFQCRNFLDMGDQXVKAD 103          
BLAST of mRNA_C-linearis_contig8.15535.1 vs. uniprot
Match: A0A2P4YHG3_9STRA (Zinc ion binding protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YHG3_9STRA)

HSP 1 Score: 139 bits (350), Expect = 5.980e-38
Identity = 68/94 (72.34%), Postives = 77/94 (81.91%), Query Frame = 0
Query:    1 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGPDAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHI 94
            MPATAGRVRMPH NR+ SS+ALKMTGIW +TIGYDPYAAEG     E    ++EQA+GLMALAKLSN+   + RGACKKCG VGHLTFQCRNH+
Sbjct:    1 MPATAGRVRMPHNNRMHSSAALKMTGIWKDTIGYDPYAAEG--EKKETSETSYEQAKGLMALAKLSNKS-NDVRGACKKCGMVGHLTFQCRNHL 91          
BLAST of mRNA_C-linearis_contig8.15535.1 vs. uniprot
Match: A0A329RX20_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RX20_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.440e-36
Identity = 68/94 (72.34%), Postives = 77/94 (81.91%), Query Frame = 0
Query:    1 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGPDAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHI 94
            MPATAGRVRMPH NR+ SS+ LKMTGIW NTIGYDPYAAEG     E    ++EQA+GLMALAKLSN+  ++ RGACKKCG VGHLTFQCRNH+
Sbjct:    1 MPATAGRVRMPHNNRMHSSATLKMTGIWKNTIGYDPYAAEGE-QQGETSETSYEQAKGLMALAKLSNKS-SDVRGACKKCGMVGHLTFQCRNHL 92          
BLAST of mRNA_C-linearis_contig8.15535.1 vs. uniprot
Match: A0A6A3SK00_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3SK00_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.710e-36
Identity = 69/94 (73.40%), Postives = 77/94 (81.91%), Query Frame = 0
Query:    1 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGPDAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHI 94
            MPATAGRVRMPH NR+ SS+ALKMTGIW NTIGYDPYAAE    +  D   +FEQA+GLMALAKLSN+   + RGACKKCG VGHLTFQCRNH+
Sbjct:    1 MPATAGRVRMPHNNRMHSSAALKMTGIWKNTIGYDPYAAEDEKQETSD--TSFEQAKGLMALAKLSNKS-NDVRGACKKCGMVGHLTFQCRNHL 91          
BLAST of mRNA_C-linearis_contig8.15535.1 vs. uniprot
Match: A0A0W8C9S2_PHYNI (CAX-interacting protein 4 n=17 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C9S2_PHYNI)

HSP 1 Score: 139 bits (351), Expect = 1.780e-36
Identity = 68/94 (72.34%), Postives = 76/94 (80.85%), Query Frame = 0
Query:    1 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGPDAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHI 94
            MPATAGRVRMPH NR+ SS+ LKMTGIW NTIGYDPYAAEG     E    ++EQA+GLMALAKLSN+   + RGACKKCG VGHLTFQCRNH+
Sbjct:    1 MPATAGRVRMPHNNRMHSSATLKMTGIWXNTIGYDPYAAEGE-KQGETSETSYEQAKGLMALAKLSNKS-NDVRGACKKCGMVGHLTFQCRNHL 92          
BLAST of mRNA_C-linearis_contig8.15535.1 vs. uniprot
Match: A0A3M6VM93_9STRA (CCHC-type domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VM93_9STRA)

HSP 1 Score: 138 bits (348), Expect = 3.120e-36
Identity = 67/94 (71.28%), Postives = 77/94 (81.91%), Query Frame = 0
Query:    1 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGPDAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHI 94
            MPAT+GRVRMPH NR+ SS+ALKMTGIW NTIGYDPYAAE      E    ++EQA+GLM LAKLSN+G ++ RGACKKCG VGHLTFQCRNH+
Sbjct:   15 MPATSGRVRMPHNNRMHSSAALKMTGIWKNTIGYDPYAAED--EKKETTETSYEQAKGLMTLAKLSNKG-SDVRGACKKCGKVGHLTFQCRNHL 105          
BLAST of mRNA_C-linearis_contig8.15535.1 vs. uniprot
Match: A0A833TGJ4_PHYIN (Zinc knuckle n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TGJ4_PHYIN)

HSP 1 Score: 138 bits (348), Expect = 4.150e-36
Identity = 68/94 (72.34%), Postives = 75/94 (79.79%), Query Frame = 0
Query:    1 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGPDAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHI 94
            MPATAGRVRMPH NR+ SS+ LKMTGIW NTIGYDPYAAEG     E    + EQA+GLMALAKLSN+   + RGACKKCG VGHLTFQCRNH+
Sbjct:    1 MPATAGRVRMPHNNRMHSSATLKMTGIWKNTIGYDPYAAEGE-QQGETNETSLEQAKGLMALAKLSNKS-NDVRGACKKCGMVGHLTFQCRNHL 92          
BLAST of mRNA_C-linearis_contig8.15535.1 vs. uniprot
Match: A0A8K1FHX2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHX2_PYTOL)

HSP 1 Score: 137 bits (346), Expect = 8.640e-36
Identity = 68/94 (72.34%), Postives = 78/94 (82.98%), Query Frame = 0
Query:    1 MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGPDAEDEANAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHI 94
            MPA+AGRVRMPH NR+ SS+ALKMTGIWTNTIGYDPYAAEG     E   +++EQAQGLMALAKLSN+   + RGACKKCG +GHLTFQCRN +
Sbjct:    1 MPASAGRVRMPHNNRMHSSAALKMTGIWTNTIGYDPYAAEGE-EKKEVSQSSYEQAQGLMALAKLSNKS-NDVRGACKKCGMLGHLTFQCRNFL 92          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15535.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC93_ECTSI1.840e-6697.22CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A835YWX5_9STRA9.710e-4984.69Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2D4C9D1_PYTIN3.510e-4070.19Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A2P4YHG3_9STRA5.980e-3872.34Zinc ion binding protein n=1 Tax=Phytophthora palm... [more]
A0A329RX20_9STRA1.440e-3672.34Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A6A3SK00_9STRA1.710e-3673.40Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A0W8C9S2_PHYNI1.780e-3672.34CAX-interacting protein 4 n=17 Tax=Phytophthora Ta... [more]
A0A3M6VM93_9STRA3.120e-3671.28CCHC-type domain-containing protein n=1 Tax=Perono... [more]
A0A833TGJ4_PHYIN4.150e-3672.34Zinc knuckle n=1 Tax=Phytophthora infestans TaxID=... [more]
A0A8K1FHX2_PYTOL8.640e-3672.34Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 225..245
NoneNo IPR availablePFAMPF13917zf-CCHC_3coord: 73..92
e-value: 9.1E-8
score: 32.0
NoneNo IPR availablePANTHERPTHR31437FAMILY NOT NAMEDcoord: 1..213
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 77..92
score: 8.598

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:1126789..1131463 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15535.1mRNA_C-linearis_contig8.15535.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 1126555..1131814 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15535.1 ID=prot_C-linearis_contig8.15535.1|Name=mRNA_C-linearis_contig8.15535.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=272bp
MPATAGRVRMPHGNRVSSSSALKMTGIWTNTIGYDPYAAEGGGPDAEDEA
NAFEQAQGLMALAKLSNQGVTEQRGACKKCGSVGHLTFQCRNHIQPVDAD
APMQAVEEESESDSDDISVSSVSDSSDEEDTRRRNGGGGGSGSTSKSGKG
KEKKSSRTSSSHRDRDRDRDGGSSKRKRRREVDSSDDDSDDSDSGSGGRR
KGSGSSSKKRRSRSGDDGKDKDRTKDKSERRERKERKRKDREREKSRKST
SKKSKKDKREKKSKHSKHKRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC