prot_C-linearis_contig8.15533.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15533.1
Unique Nameprot_C-linearis_contig8.15533.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length956
Homology
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BLAST of mRNA_C-linearis_contig8.15533.1 vs. uniprot
Match: D8LC94_ECTSI (SET domain and mariner transposase fusion n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC94_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 1.060e-39
Identity = 113/220 (51.36%), Postives = 130/220 (59.09%), Query Frame = 0 
Query:  574 GVLIDRSTEASNPTR------PPDTEVKVVARVEVVASVEYARDPESGLNLRSCGTQMVGNSAAVQANIVVPGMAGTHTSVKNGRTTSSTRAPGVGYQAGEPYTKWGRFACEMPAGCSYAREE-------VREHSSLNSPRRRPRSWGGNEADANVRQEDDDGNDSGSSAPGGADPAGTSRDGGAAHLDDCENAAEKFGGRDATRMPAIPSVRGGPAYLE 780
            GV   ++     PTR      P +  VKV+ R E +ASVEYA DPE GL+LRSCGTQ+VGNSAA QANI V GM+GTH++V NG      R PGVGYQ GEPY KWGRFACEMP G    R+        VR  SS NS RRRPRS GG+    +V   +D    SG+ A    D  G SR   AA   D E   E+  GR   R+   PSVRGGPAYLE
Sbjct:  455 GVSRRKTPSRLKPTRDKPSIEPQENMVKVLVRTEALASVEYAHDPERGLDLRSCGTQIVGNSAATQANIAVAGMSGTHSAVGNGFGAQGPRTPGVGYQPGEPYAKWGRFACEMPVGSRIRRDPDVGGGAPVRR-SSPNS-RRRPRSSGGSGFHDSVGGRNDC-TGSGAGAANAEDDGGDSR---AAQPSDSEVEPEEGYGRGPVRVSCAPSVRGGPAYLE 668
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15533.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LC94_ECTSI1.060e-3951.36SET domain and mariner transposase fusion n=1 Tax=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:1115315..1119949 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15533.1mRNA_C-linearis_contig8.15533.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 1115093..1119949 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15533.1 ID=prot_C-linearis_contig8.15533.1|Name=mRNA_C-linearis_contig8.15533.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=956bp
MFARAGNGGGDDPYNFDIVGGYGGGSKKKSKKSKLGGKASLNKTVGASPN
TSPLMPEASTHAEVVLGPTTTAVLKAMKDPLRASAPAGPTSALDKAMSFL
NKYKQGASNAATVKGANTSRKTLDVADTTFDEDEMDTSLSSDSDAAGRNP
GRKATSRLKASRDEPGLEPTATAGTERDFATRSLTLSGMRSSGRFGTAKE
LGISESGGLDGPKAAVSPVGIQRQRSDRGARYQAEAGSPSENQSSGLRLV
VNIPGESSTYGSPAKHESESDIESVGSAVADALEVQSPGGKEVSEAEPSS
LASPNLEQQSGSARNLIQDSRGAGGRGFARSPPDRSALGKVMSVNDLAIA
LSRPQSSPNQSDRGVNAADGSGSESSGRIRGSYAAEGAEPEDYDDDEDDY
GDDDFEDQDVVMESIGETAPMAEGQNTNSAPTTEAPSHVSRVGQSGLRTG
GAANNQEREVLSRPLEAWSMPPADKEEARSLSGTPNPGITLGSCVNGDID
KRDERVPFGTREAWVERSAPGSCAKYEESSAPAATGGVARTPFPNTDQRQ
KQGDNSARGTGKEETIEGSLSKRGVLIDRSTEASNPTRPPDTEVKVVARV
EVVASVEYARDPESGLNLRSCGTQMVGNSAAVQANIVVPGMAGTHTSVKN
GRTTSSTRAPGVGYQAGEPYTKWGRFACEMPAGCSYAREEVREHSSLNSP
RRRPRSWGGNEADANVRQEDDDGNDSGSSAPGGADPAGTSRDGGAAHLDD
CENAAEKFGGRDATRMPAIPSVRGGPAYLETFLDVMAKSQAESCYTWQQV
LETAAPPHVPAFPDEKARREEKTGTAGGVDDAEPCRRDSATPKGQERYQG
PSEADLALHSIMTATQDSFRRQLADMRENLNKIRYRAEVAGREAYAHTYE
SVSGVRDHLASTRPPATRPAEAFMTVDPSLTREEAETLTVGGTVPPSRVY
IDRRF*
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