prot_C-linearis_contig8.15519.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15519.1
Unique Nameprot_C-linearis_contig8.15519.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length254
Homology
BLAST of mRNA_C-linearis_contig8.15519.1 vs. uniprot
Match: A0A6H5LDF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDF4_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 7.070e-43
Identity = 97/252 (38.49%), Postives = 136/252 (53.97%), Query Frame = 0
Query:    1 MVVQRSLFNEAVALYNRLADFPPATTCFESPSRPGVPLGTAGALTQRGVKPGTQFLRARREDAIAGIMGGVEPYGDTCDKYLHLAVLLRLEKRETQLEMEAACPDVRNNPEYSSFFVDADGEELPVVTERMLYDNGGGVDVDYEGSVFSDAMALFKFDGKLIGGAQTGGSGRRGATRRVLVGSDEESRIENAAAGSTVIQYVMALPLYDAFVYAFRRTNLYVDGLYLNDNVVGIAIHGGRVSLVRSRQTRTR 252
            +V+  S +  A+ LY+R  +FP  T   E P  PGV  G        G K   QF+R  +  A+  +M   EPYG    K++ LA  L  E    Q +M    P+ R+ P++S  FVD   +  P+    M++D GGG D DY G + SDA      DG++ GGAQ+ GSGRRGATR V VG  E+ R+   AA +T ++  MALPL+D      R+  L+  GL+L  N +GIA  G +VSLV +   ++R
Sbjct:   41 IVIPTSRYEAALDLYSRRHEFPATTDGVEDPPVPGVVRG--------GKKGVPQFMRTDKSTAVKALMQAKEPYGSPAHKFIFLASALEKESPAVQEKMVDRLPEARD-PQFSHLFVDDSNKPSPLWVVDMVHDTGGGEDTDYSGRL-SDAKTRAYHDGRVFGGAQSAGSGRRGATRIVEVGLAEDERVRTEAADTTHVESTMALPLWDVVAIMGRKDTLFKQGLWLFGNAIGIAKVGSKVSLVETTPKKSR 282          
BLAST of mRNA_C-linearis_contig8.15519.1 vs. uniprot
Match: A0A6H5JAK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAK8_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 1.720e-39
Identity = 95/252 (37.70%), Postives = 133/252 (52.78%), Query Frame = 0
Query:    1 MVVQRSLFNEAVALYNRLADFPPATTCFESPSRPGVPLGTAGALTQRGVKPGTQFLRARREDAIAGIMGGVEPYGDTCDKYLHLAVLLRLEKRETQLEMEAACPDVRNNPEYSSFFVDADGEELPVVTERMLYDNGGGVDVDYEGSVFSDAMALFKFDGKLIGGAQTGGSGRRGATRRVLVGSDEESRIENAAAGSTVIQYVMALPLYDAFVYAFRRTNLYVDGLYLNDNVVGIAIHGGRVSLVRSRQTRTR 252
            +V+  S +  A+ L++R  + P  T   E P  PGV  G        G K   QF+R  +  A+  +M   EPYG    K++ LA  L  E    Q +M    P+ R+ P++S  FVD   +  P+    M++  GGG D DY G + SDA      DG + GGAQ+ GSGRRGATR V VGS E+ R+   AA +T +Q  MALPL+D       +  L+  GL+L  N +GIA  G +VSLV +   ++R
Sbjct:   40 IVIPTSRYKAALDLFSRRHELPATTDGVEDPPVPGVVRG--------GKKGVPQFMRTDKSTAVKALMQAKEPYGSPAHKFIFLASALEKESPAVQEKMVDRLPEARD-PQFSHLFVDDSNKPSPLWVVDMVHHTGGGEDTDYSGRL-SDAKTRAYHDGCVFGGAQSAGSGRRGATRIVEVGSAEDERVRTEAADTTYVQSTMALPLWDVVAIMAGKDTLFEQGLWLFGNTIGIAKVGSKVSLVETTPKKSR 281          
BLAST of mRNA_C-linearis_contig8.15519.1 vs. uniprot
Match: D7G6J6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J6_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 1.140e-38
Identity = 101/258 (39.15%), Postives = 141/258 (54.65%), Query Frame = 0
Query:    1 MVVQRSLFNEAVALYNRLADF--PPATTCFESPSRPGVPLGTAGALTQRGVKPGTQFLRARREDAIAGIMGGVEPYGDTCDKYLHLAVLLRLEKRETQLEMEAACPDVRNNPEYSSFFVDADGEELPVVTERMLYDNGGGVDVDYEGSVFSDAMALFKFDGKLIGGAQTGGSGRRGATRRVLVGSDEESRIENA-AAGSTVIQYVMALPLYDAFVYAFRRTNLYVDGLYLNDNVVGIAIHGGR--VSLVRSRQTRTRG 253
            MVV  S + +AV ++ R  D+  PPAT   E    PGV             K    F RA R DAI   +   +PYGD   K+L L  L   E    Q +MEAA P+ ++ PE++  F +A+   +P +  R+++D+G G DVD  G V +D   L  FDG +IGGAQ      RGA R V++GS+E+ R+     A +TV    M +PLYDAFV + R   LY  G +LN NVVG+A   G+  +SLV++++  TRG
Sbjct:    1 MVVPASHYRKAVEIFRRRLDYGLPPATDGNEDEPHPGVIPS----------KDAPSFQRASRNDAIRATLRTKQPYGDELHKFLALGSLFHWETPAEQTKMEAAFPEAQS-PEHAGLFKNANNIAVPRLVVRVVHDSGAGKDVDRSGRVQADDKVLITFDGGVIGGAQ------RGARRTVVLGSEEDQRLNTPEVAATTVTDSTMIIPLYDAFVLSARSDTLYQTGPWLNKNVVGLAKVRGQHGLSLVKTKEGSTRG 241          
BLAST of mRNA_C-linearis_contig8.15519.1 vs. uniprot
Match: D7FWV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWV7_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 1.800e-38
Identity = 101/258 (39.15%), Postives = 141/258 (54.65%), Query Frame = 0
Query:    1 MVVQRSLFNEAVALYNRLADF--PPATTCFESPSRPGVPLGTAGALTQRGVKPGTQFLRARREDAIAGIMGGVEPYGDTCDKYLHLAVLLRLEKRETQLEMEAACPDVRNNPEYSSFFVDADGEELPVVTERMLYDNGGGVDVDYEGSVFSDAMALFKFDGKLIGGAQTGGSGRRGATRRVLVGSDEESRIENA-AAGSTVIQYVMALPLYDAFVYAFRRTNLYVDGLYLNDNVVGIAIHGGR--VSLVRSRQTRTRG 253
            MVV  S + +AV ++ R  D+  PPAT   E    PGV             K    F RA R DAI   +   +PYGD   K+L L  L   E    Q +MEAA P+ ++ PE++  F +A+   +P +  R+++D+G G DVD  G V +D   L  FDG +IGGAQ      RGA R V++GS+E+ R+     A +TV    M +PLYDAFV + R   LY  G +LN NVVG+A   G+  +SLV++++  TRG
Sbjct:    1 MVVPASHYRKAVEIFRRRLDYGLPPATDGNEDEPHPGVIPS----------KDAPSFQRASRNDAIRATLRTKQPYGDELHKFLALGSLFHWETPAEQTKMEAAFPEAQS-PEHAGLFKNANNIAVPRLVVRVVHDSGAGKDVDRSGRVQADDKVLITFDGGVIGGAQ------RGARRTVVLGSEEDQRLNTPEVAATTVTDSTMIIPLYDAFVLSARSDTLYQTGPWLNKNVVGLAKVRGQHGLSLVKTKEGSTRG 241          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15519.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5LDF4_9PHAE7.070e-4338.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAK8_9PHAE1.720e-3937.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6J6_ECTSI1.140e-3839.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWV7_ECTSI1.800e-3839.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:980331..981707 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15519.1mRNA_C-linearis_contig8.15519.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 978865..981814 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15519.1 ID=prot_C-linearis_contig8.15519.1|Name=mRNA_C-linearis_contig8.15519.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=254bp
MVVQRSLFNEAVALYNRLADFPPATTCFESPSRPGVPLGTAGALTQRGVK
PGTQFLRARREDAIAGIMGGVEPYGDTCDKYLHLAVLLRLEKRETQLEME
AACPDVRNNPEYSSFFVDADGEELPVVTERMLYDNGGGVDVDYEGSVFSD
AMALFKFDGKLIGGAQTGGSGRRGATRRVLVGSDEESRIENAAAGSTVIQ
YVMALPLYDAFVYAFRRTNLYVDGLYLNDNVVGIAIHGGRVSLVRSRQTR
TRG*
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