prot_C-linearis_contig8.15512.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15512.1
Unique Nameprot_C-linearis_contig8.15512.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length56
Homology
BLAST of mRNA_C-linearis_contig8.15512.1 vs. uniprot
Match: D7FIV2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV2_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 1.240e-23
Identity = 47/56 (83.93%), Postives = 49/56 (87.50%), Query Frame = 0
Query:    1 SAHYLADIWNKWFYETPVVQDDGCSWTREEYLQLRDQLIDGRLLAGDASFKYAKVI 56
            SAHYL DIW+K FYETPVVQ DGCSWTREEYLQ R QL+DG  LAGDASFKYAKVI
Sbjct:  220 SAHYLGDIWHKGFYETPVVQADGCSWTREEYLQRRAQLVDGCSLAGDASFKYAKVI 275          
BLAST of mRNA_C-linearis_contig8.15512.1 vs. uniprot
Match: D7G3Q9_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q9_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 1.200e-15
Identity = 35/56 (62.50%), Postives = 43/56 (76.79%), Query Frame = 0
Query:    1 SAHYLADIWNKWFYETPVVQDDGCSWTREEYLQLRDQLIDGRLLAGDASFKYAKVI 56
            S  YL  +W+KWFY+T V++ DG   TRE+YLQ   QL+DG +LAGDASFKYAKVI
Sbjct:   60 SDQYLRAVWHKWFYDTVVIEADGVRMTREDYLQRVGQLVDGMVLAGDASFKYAKVI 115          
BLAST of mRNA_C-linearis_contig8.15512.1 vs. uniprot
Match: A0A6H5JCK3_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK3_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 1.420e-15
Identity = 39/62 (62.90%), Postives = 45/62 (72.58%), Query Frame = 0
Query:    1 SAHYLADIWNKWFYETPVVQDDGCSWTREE------YLQLRDQLIDGRLLAGDASFKYAKVI 56
            SAHYL DIW+KWFYE P+V+    +W   +      YLQ R QL+DGRLLAGDASFKYAKVI
Sbjct:   13 SAHYLGDIWHKWFYEMPMVK----TWVTTDALGHVNYLQRRAQLVDGRLLAGDASFKYAKVI 70          
BLAST of mRNA_C-linearis_contig8.15512.1 vs. uniprot
Match: A0A6H5KFP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP9_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 5.790e-14
Identity = 31/56 (55.36%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    1 SAHYLADIWNKWFYETPVVQDDGCSWTREEYLQLRDQLIDGRLLAGDASFKYAKVI 56
            S HYL D+W  +F E PV++ +G  WTRE+YL    Q  DG +LAGDASFK+AK+I
Sbjct:  120 SDHYLRDVWRTYFSELPVLEVEGVKWTREDYLPRVHQRCDGTVLAGDASFKFAKII 175          
BLAST of mRNA_C-linearis_contig8.15512.1 vs. uniprot
Match: A0A6H5KE68_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE68_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 2.570e-13
Identity = 31/56 (55.36%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    1 SAHYLADIWNKWFYETPVVQDDGCSWTREEYLQLRDQLIDGRLLAGDASFKYAKVI 56
            S HYL D+W  +F E PV++  G  WTRE+YL    Q  DG +LAGDASFK+AK+I
Sbjct:  151 SDHYLRDVWRTYFSELPVLEVKGVKWTREDYLHCVHQRWDGTVLAGDASFKFAKII 206          
BLAST of mRNA_C-linearis_contig8.15512.1 vs. uniprot
Match: A0A6H5JXW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXW9_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 3.510e-13
Identity = 31/56 (55.36%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    1 SAHYLADIWNKWFYETPVVQDDGCSWTREEYLQLRDQLIDGRLLAGDASFKYAKVI 56
            S HYL D+W  +F E PV+  +G  WTRE+YL    Q  DG +LAGDASFK+AK+I
Sbjct:  106 SDHYLRDVWRTYFSELPVLGVEGVKWTREDYLPRVHQRWDGTVLAGDASFKFAKII 161          
BLAST of mRNA_C-linearis_contig8.15512.1 vs. uniprot
Match: A0A6H5L553_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L553_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 2.450e-12
Identity = 30/56 (53.57%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    1 SAHYLADIWNKWFYETPVVQDDGCSWTREEYLQLRDQLIDGRLLAGDASFKYAKVI 56
            S HYL D+W  +F E PV++ +G  WT E+YL    Q  DG +LAGDASFK+AK+I
Sbjct:  144 SDHYLRDVWRTYFSELPVLEVEGVKWTWEDYLPRVHQRWDGTVLAGDASFKFAKII 199          
BLAST of mRNA_C-linearis_contig8.15512.1 vs. uniprot
Match: A0A6H5K4D4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4D4_9PHAE)

HSP 1 Score: 48.5 bits (114), Expect = 4.680e-5
Identity = 19/20 (95.00%), Postives = 20/20 (100.00%), Query Frame = 0
Query:    1 SAHYLADIWNKWFYETPVVQ 20
            SAH+LADIWNKWFYETPVVQ
Sbjct:  356 SAHHLADIWNKWFYETPVVQ 375          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15512.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FIV2_ECTSI1.240e-2383.933'-5' exonuclease domain-containing protein n=1 Ta... [more]
D7G3Q9_ECTSI1.200e-1562.503'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5JCK3_9PHAE1.420e-1562.903'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KFP9_9PHAE5.790e-1455.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KE68_9PHAE2.570e-1355.36Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXW9_9PHAE3.510e-1355.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L553_9PHAE2.450e-1253.57Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4D4_9PHAE4.680e-595.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:925755..926094 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15512.1mRNA_C-linearis_contig8.15512.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 925754..926094 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15512.1 ID=prot_C-linearis_contig8.15512.1|Name=mRNA_C-linearis_contig8.15512.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=56bp
SAHYLADIWNKWFYETPVVQDDGCSWTREEYLQLRDQLIDGRLLAGDASF
KYAKVI
back to top