prot_C-linearis_contig8.15510.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15510.1
Unique Nameprot_C-linearis_contig8.15510.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length140
Homology
BLAST of mRNA_C-linearis_contig8.15510.1 vs. uniprot
Match: A0A6H5KRB4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRB4_9PHAE)

HSP 1 Score: 208 bits (529), Expect = 1.550e-64
Identity = 102/138 (73.91%), Postives = 112/138 (81.16%), Query Frame = 0
Query:    1 MGVGVRLGEFDVDEEDVMMPFRELIGSLTWLAMQTRPDIANAVRAIARYCAHPKLRHWEAARDVLGYVRRTSWMGISFQRGSAMGLSMQGFADADFASKAADRRSVSGDIVMCAGGVVAYFSRTQKCVTTSTTEAEYV 138
            M  GV+L +FD DE     PFREL+GSL WLA QTRPDIANAVRA+ARYCA PKL HW AA D+LGY RRTS  GISFQRG+  G S+QG+ADADFASKAADRRSVSG IV C GG V++FSRTQKCVT STTEAEYV
Sbjct:   79 MSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYV 216          
BLAST of mRNA_C-linearis_contig8.15510.1 vs. uniprot
Match: A0A6H5KPF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPF9_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 7.430e-64
Identity = 101/138 (73.19%), Postives = 114/138 (82.61%), Query Frame = 0
Query:    1 MGVGVRLGEFDVDEEDVMMPFRELIGSLTWLAMQTRPDIANAVRAIARYCAHPKLRHWEAARDVLGYVRRTSWMGISFQRGSAMGLSMQGFADADFASKAADRRSVSGDIVMCAGGVVAYFSRTQKCVTTSTTEAEYV 138
            M  GV+L +FD DEE    PFREL+GSL WLA QTRPDIANAVRA+ARYCA PK  HW+AA  +LGY +RTS+MGISFQRG+  G S+QG+ADADFASKAADRRSVSG IV C GGVV++FSRTQKCVT STTEA YV
Sbjct:  110 MSSGVKLSDFDADEEATDFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKRVHWDAAMGILGYAKRTSYMGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGVVSWFSRTQKCVTLSTTEAGYV 247          
BLAST of mRNA_C-linearis_contig8.15510.1 vs. uniprot
Match: A0A6H5K775_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K775_9PHAE)

HSP 1 Score: 208 bits (530), Expect = 1.470e-63
Identity = 102/138 (73.91%), Postives = 113/138 (81.88%), Query Frame = 0
Query:    1 MGVGVRLGEFDVDEEDVMMPFRELIGSLTWLAMQTRPDIANAVRAIARYCAHPKLRHWEAARDVLGYVRRTSWMGISFQRGSAMGLSMQGFADADFASKAADRRSVSGDIVMCAGGVVAYFSRTQKCVTTSTTEAEYV 138
            M  GV+L +FD DE     PFREL+GSL WLA QTRPDIANAVRA+ARYCA PKL HW AA D+LGY RRTS  GISFQRG+  GLS+QG+ADADFASKAADRRSVSG+IV C  G V++FSRTQKCVT STTEAEYV
Sbjct:  226 MSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGLSLQGYADADFASKAADRRSVSGEIVACGAGAVSWFSRTQKCVTLSTTEAEYV 363          
BLAST of mRNA_C-linearis_contig8.15510.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE)

HSP 1 Score: 208 bits (529), Expect = 6.360e-63
Identity = 102/138 (73.91%), Postives = 112/138 (81.16%), Query Frame = 0
Query:    1 MGVGVRLGEFDVDEEDVMMPFRELIGSLTWLAMQTRPDIANAVRAIARYCAHPKLRHWEAARDVLGYVRRTSWMGISFQRGSAMGLSMQGFADADFASKAADRRSVSGDIVMCAGGVVAYFSRTQKCVTTSTTEAEYV 138
            M  GV+L +FD DE     PFREL+GSL WLA QTRPDIANAVRA+ARYCA PKL HW AA D+LGY RRTS  GISFQRG+  G S+QG+ADADFASKAADRRSVSG IV C GG V++FSRTQKCVT STTEAEYV
Sbjct:  221 MSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYV 358          
BLAST of mRNA_C-linearis_contig8.15510.1 vs. uniprot
Match: A0A6H5KLT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLT9_9PHAE)

HSP 1 Score: 203 bits (516), Expect = 1.070e-62
Identity = 101/138 (73.19%), Postives = 111/138 (80.43%), Query Frame = 0
Query:    1 MGVGVRLGEFDVDEEDVMMPFRELIGSLTWLAMQTRPDIANAVRAIARYCAHPKLRHWEAARDVLGYVRRTSWMGISFQRGSAMGLSMQGFADADFASKAADRRSVSGDIVMCAGGVVAYFSRTQKCVTTSTTEAEYV 138
            M  GV+L +FD DE     PFREL+GSL WLA QTRPDIANAVRA+ARYCA P L HW AA D+LG  RRTS  GISFQRG+  GLS+QG+ADADFASKAADRRSVSG IV C GG V++FSRTQKCVT STTEAEYV
Sbjct:   85 MSSGVKLSDFDADEVATDFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPTLVHWNAAMDILGDARRTSHFGISFQRGTVEGLSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYV 222          
BLAST of mRNA_C-linearis_contig8.15510.1 vs. uniprot
Match: A0A6H5KSZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ5_9PHAE)

HSP 1 Score: 201 bits (512), Expect = 2.550e-62
Identity = 100/138 (72.46%), Postives = 110/138 (79.71%), Query Frame = 0
Query:    1 MGVGVRLGEFDVDEEDVMMPFRELIGSLTWLAMQTRPDIANAVRAIARYCAHPKLRHWEAARDVLGYVRRTSWMGISFQRGSAMGLSMQGFADADFASKAADRRSVSGDIVMCAGGVVAYFSRTQKCVTTSTTEAEYV 138
            M  GV+L +FD DE     PFREL+GSL WLA QTRP IANAVRA+ARYCA PKL HW AA D+LGY RRTS  GISFQRG+  G S+QG+ADADFASKAADRRSVSG IV C GG V++FS TQKCVT STTEAEYV
Sbjct:   51 MSSGVKLSDFDADEVATDFPFRELVGSLMWLATQTRPAIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSITQKCVTLSTTEAEYV 188          
BLAST of mRNA_C-linearis_contig8.15510.1 vs. uniprot
Match: A0A6H5JTK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK6_9PHAE)

HSP 1 Score: 200 bits (508), Expect = 8.860e-62
Identity = 100/136 (73.53%), Postives = 113/136 (83.09%), Query Frame = 0
Query:    3 VGVRLGEFDVDEEDVMMPFRELIGSLTWLAMQTRPDIANAVRAIARYCAHPKLRHWEAARDVLGYVRRTSWMGISFQRGSAMGLSMQGFADADFASKAADRRSVSGDIVMCAGGVVAYFSRTQKCVTTSTTEAEYV 138
            VG++L EFD DEE V  PFRELIGSL WLA QTRPDIANAVRA+ARYCA PK  HW A   +LGYV RTS +GI+F+RGS  GLSM+ FADAD+ASKAADRRSVSG +VMC GG +++FSRTQKCVT STTEAEYV
Sbjct:   15 VGLKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCMSWFSRTQKCVTLSTTEAEYV 150          
BLAST of mRNA_C-linearis_contig8.15510.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 1.180e-61
Identity = 97/136 (71.32%), Postives = 112/136 (82.35%), Query Frame = 0
Query:    3 VGVRLGEFDVDEEDVMMPFRELIGSLTWLAMQTRPDIANAVRAIARYCAHPKLRHWEAARDVLGYVRRTSWMGISFQRGSAMGLSMQGFADADFASKAADRRSVSGDIVMCAGGVVAYFSRTQKCVTTSTTEAEYV 138
            V V+L +FD +E    +PFREL+GSL WLA QTRPDIANAVRA+ARYCA PK+ HW+AA  +LGYVRRTSWMGI+F+RG   G+SMQ F DAD+ASKA DRRSVSG +VMC GG V +FSRTQKCVT STTEAEYV
Sbjct:   82 VSVKLTDFDENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYV 217          
BLAST of mRNA_C-linearis_contig8.15510.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 202 bits (513), Expect = 1.860e-61
Identity = 97/136 (71.32%), Postives = 112/136 (82.35%), Query Frame = 0
Query:    3 VGVRLGEFDVDEEDVMMPFRELIGSLTWLAMQTRPDIANAVRAIARYCAHPKLRHWEAARDVLGYVRRTSWMGISFQRGSAMGLSMQGFADADFASKAADRRSVSGDIVMCAGGVVAYFSRTQKCVTTSTTEAEYV 138
            V V+L +FD +E    +PFREL+GSL WLA QTRPDIANAVRA+ARYCA PK+ HW+AA  +LGYVRRTSWMGI+F+RG   G+SMQ F DAD+ASKA DRRSVSG +VMC GG V +FSRTQKCVT STTEAEYV
Sbjct:  137 VSVKLTDFDENEASADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYV 272          
BLAST of mRNA_C-linearis_contig8.15510.1 vs. uniprot
Match: A0A6H5L3F1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3F1_9PHAE)

HSP 1 Score: 194 bits (493), Expect = 3.550e-61
Identity = 96/138 (69.57%), Postives = 109/138 (78.99%), Query Frame = 0
Query:    1 MGVGVRLGEFDVDEEDVMMPFRELIGSLTWLAMQTRPDIANAVRAIARYCAHPKLRHWEAARDVLGYVRRTSWMGISFQRGSAMGLSMQGFADADFASKAADRRSVSGDIVMCAGGVVAYFSRTQKCVTTSTTEAEYV 138
            M  GV+L +FD DEE    PFREL+GSL WLA QTRPDIANAVRA+ RYCA PK  H +AA  +LGY +RT +MGISFQRG+  G S+QG+ADADFASKAADRRSVSG IV C GGVV++FSRT KC T STTE EYV
Sbjct:    1 MSSGVKLSDFDADEEATDFPFRELVGSLMWLATQTRPDIANAVRAVTRYCASPKRVHRDAAMGILGYSKRTIYMGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGVVSWFSRTPKCFTLSTTEVEYV 138          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15510.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KRB4_9PHAE1.550e-6473.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPF9_9PHAE7.430e-6473.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K775_9PHAE1.470e-6373.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFG2_9PHAE6.360e-6373.91Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KLT9_9PHAE1.070e-6273.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSZ5_9PHAE2.550e-6272.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTK6_9PHAE8.860e-6273.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KP70_9PHAE1.180e-6171.32Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4G9_9PHAE1.860e-6171.32Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L3F1_9PHAE3.550e-6169.57Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 19..138
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 19..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:896715..897147 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15510.1mRNA_C-linearis_contig8.15510.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 895921..897728 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15510.1 ID=prot_C-linearis_contig8.15510.1|Name=mRNA_C-linearis_contig8.15510.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=140bp
MGVGVRLGEFDVDEEDVMMPFRELIGSLTWLAMQTRPDIANAVRAIARYC
AHPKLRHWEAARDVLGYVRRTSWMGISFQRGSAMGLSMQGFADADFASKA
ADRRSVSGDIVMCAGGVVAYFSRTQKCVTTSTTEAEYVW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like