prot_C-linearis_contig8.15506.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig8.15506.1
Unique Name	prot_C-linearis_contig8.15506.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	374

Homology

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BLAST of mRNA_C-linearis_contig8.15506.1 vs. uniprot
Match: D7G9I4_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9I4_ECTSI)

HSP 1 Score: 166 bits (420), Expect = 1.440e-46
Identity = 88/147 (59.86%), Postives = 104/147 (70.75%), Query Frame = 0

Query:   42 EKTAPACEEIEPFNIN-VPVFMERTLRMIDSVSDDIVCWSRAGDSFIVKKVLVFEQHLPSFFNHKKFLSFVRQLNFYGFRRVKGKSASRLSPADGAMHGAVAAMAAAKESESESWEEFIHPLFRRGRRDLLVGIKRHKDGGRLKRKQ 187
            E  +P     EP+N N +PVF++RT   I+  S DIVCWS  GDSFIVKKVL FE  LPS++NHKKFLSFVRQLNFYGF++V+G+ AS  + +        AA A     ES SWEEF HP FRRGRRDLLVGIKR KD GR+KR+Q
Sbjct:    2 EAASPRKAANEPYNSNHIPVFLDRTFSFIEDTSPDIVCWSEVGDSFIVKKVLAFEGLLPSYYNHKKFLSFVRQLNFYGFKKVRGRGASSRASSXXXXXXXXAAEA----EESASWEEFKHPQFRRGRRDLLVGIKRQKDDGRMKRRQ 144

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BLAST of mRNA_C-linearis_contig8.15506.1 vs. uniprot
Match: A0A6H5LDD9_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDD9_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 1.050e-43
Identity = 91/152 (59.87%), Postives = 112/152 (73.68%), Query Frame = 0

Query:   87 IVKKVLVFEQHLPSFFNHKKFLSFVRQLNFYGFRRVKGKSA--SRLSPADGAMHGAVAAMAAAKESESESWEEFIHPLFRRGRRDLLVGIKRHKDGGRLKRKQVDSHESGILSDLRADMDALRGDLRTVDGKLDNIMSLLLGMSTGDQGQAG 236
            ++  VLVFE  LPS++NHKKFLSFVRQLNFYGF++VKG ++  SR S AD        +  A    ES+SWEEF HP FRRGRRDLLVGIKR KDGGRLKRK+ DS +S IL+ LRAD+D L  DLR  +GKLD I+S+L+G ++G+  Q G
Sbjct:    5 LLTSVLVFEGLLPSYYNHKKFLSFVRQLNFYGFKKVKGGASTRSRTSAADSQGEAGAGSTGA---RESDSWEEFRHPQFRRGRRDLLVGIKRQKDGGRLKRKRADSQKSDILTTLRADVDTLSEDLREANGKLDTIISMLMGATSGNHPQQG 153

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BLAST of mRNA_C-linearis_contig8.15506.1 vs. uniprot
Match: D7FV29_ECTSI (Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV29_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 3.620e-41
Identity = 87/148 (58.78%), Postives = 108/148 (72.97%), Query Frame = 0

Query:   84 DSFIVKKVLVFEQHLPSFFNHKKFLSFVRQLNFYGFRRVKGKSASRLSPADGAMHGAVAAMAAAKESESESWEEFIHPLFRRGRRDLLVGIKRHKDGGRLKRKQVDSHESGILSDLRADMDALRGDLRTVDGKLDNIMSLLLGMSTGD 231
            D F    VL FE  LPS++NHKKFLSFVRQLNFYGF++VKG  ASR+S A  ++H   +A+AA    ES+SW+EF HP FRRGRRDLL GIKR KDGGR+KRKQ +  + G LS L  D+D +  DLR  +GKLD+IM +L GM+ G+
Sbjct:   21 DVFATLHVLAFEGLLPSYYNHKKFLSFVRQLNFYGFKKVKGDPASRMSSAS-SVHPPPSAVAA---DESDSWQEFRHPEFRRGRRDLLAGIKRQKDGGRVKRKQAELEKLGTLSTLTTDVDMMSVDLRAANGKLDDIMLMLSGMAGGN 164

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BLAST of mRNA_C-linearis_contig8.15506.1 vs. uniprot
Match: D7G1S0_ECTSI (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1S0_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 5.360e-36
Identity = 105/287 (36.59%), Postives = 142/287 (49.48%), Query Frame = 0

Query:   82 AGDSFIVKKVLVFEQHLPSFFNHKKFLSFVRQLNFYGFRRVKGKSASRLSPADGAMHGAVAAMAAAKESESESWEEFIHPLFRRGRRDLLVGIKRHKDGGRLKRKQVDSHESGILSDLRADMDALRGDLRTVDGKLDNIMSLLLGMSTGDQGQAGSTKPLPLSQNAADRYAGAAXXXXXXXXXXXXXXXXXXAATSASTVLGRDREGLNQWRGGGGVGVDGGIHPASQDPNALGSRLGHYVEPRLAMDQQHQQGSERHQLAHFSQQPSPAQRTWPDPTRFGTRWREH 368
            A    +  KVL FE  LPS++NHK FLSFVRQLNFYGF++VKG                     A++   S+SWEEF+HP FR+GRRDLLV IKR KDGG LKRKQ D  +S IL+ L  ++ ++R DL   +GKLD+++SLL G++       G+ +P  LS        G                     +  +S+V G    G  +W  G GVG  G          A   +L     PR   DQQ +Q  + H     S+ P PA++ +P+      + R H
Sbjct:    4 ASQRDVSSKVLAFEGLLPSYYNHKNFLSFVRQLNFYGFKKVKG--------------------GASRSESSDSWEEFMHPQFRQGRRDLLVSIKRQKDGGHLKRKQDDLRKSDILNTLAVEVGSMRVDLEMANGKLDDVLSLLSGIT-------GTKQPGELSVQQHQSMRG---------------DDGRGGSDRSSSVHG----GFGRW--GAGVGGGGDTGQRCLGAYAHSEQLDGSSAPRFHTDQQRRQEWQGHVAFPHSRWPCPAEQ-YPEENNEHNQMRHH 241

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BLAST of mRNA_C-linearis_contig8.15506.1 vs. uniprot
Match: D7G1S2_ECTSI (Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1S2_ECTSI)

HSP 1 Score: 122 bits (305), Expect = 4.310e-30
Identity = 68/105 (64.76%), Postives = 78/105 (74.29%), Query Frame = 0

Query:   90 KVLVFEQHLPSFFNHKKFLSFVRQLNFYGFRRVKGKSA--SRLSPADGAMHGAVAAMAAAKESESESWEEFIHPLFRRGRRDLLVGIKRHKDGGRLKRKQVDSHE 192
            +VLVFE  LPS++NHKKFLSFVRQLNFYGF++VKG ++  SR S AD        +  A    ES+SWEEF HP FRRGRRDLLVGIKR KDGGRLKRK+ D  E
Sbjct:   39 QVLVFEGLLPSYYNHKKFLSFVRQLNFYGFKKVKGGASTRSRSSAADSQGEAGAGSTGA---RESDSWEEFRHPQFRRGRRDLLVGIKRQKDGGRLKRKRDDEVE 140

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BLAST of mRNA_C-linearis_contig8.15506.1 vs. uniprot
Match: A0A8K1CMF4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMF4_PYTOL)

HSP 1 Score: 110 bits (275), Expect = 8.920e-23
Identity = 66/187 (35.29%), Postives = 104/187 (55.61%), Query Frame = 0

Query:   59 PVFMERTLRMIDSVSDDIVCWSRAGDSFIVKKVLVFEQH-LPSFFNHKKFLSFVRQLNFYGFRRVKGKSASRLSPADGAMHGAVAAMAAAKESESESWEEFIHPLFRRGRRDLLVGIKR---HKDGGRLKRKQVDSHESGILSDLRADMDALRGDLRTVDGKLDNIMSLLLGMSTGDQGQAGSTKPL 241
            P+F+E+T  M+D  +  I CWS AGDSFIVK  + F ++ +PS+F HK F SFVRQLNFYGFR+V+          D  + G V         + + W EF H  F+RGR++LL  IKR   H +G   +     + + G + DLR+++  LR  ++ ++  +  +M +++  +    G  G+  P+
Sbjct:  152 PLFLEKTYEMLDKCATHIACWSSAGDSFIVKNPIEFAENVIPSYFKHKNFSSFVRQLNFYGFRKVR--------VVDPEVTGGV---------DPKDWWEFRHEKFQRGRKELLKEIKRRSLHANGSSGQSDGRPNIDRGEIEDLRSEVCTLREQIQQLNKHMIGVMQIVMARNQTAPGGPGAPPPV 321

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BLAST of mRNA_C-linearis_contig8.15506.1 vs. uniprot
Match: A0A7S4IT22_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IT22_9STRA)

HSP 1 Score: 107 bits (266), Expect = 8.930e-23
Identity = 66/188 (35.11%), Postives = 101/188 (53.72%), Query Frame = 0

Query:   59 PVFMERTLRMIDSVSDDIVCWSRAGDSFIVKKVLVFE-QHLPSFFNHKKFLSFVRQLNFYGFRRVKGKSASRLSPADGAMHGAVAAMAAAKESESESWEEFIHPLFRRGRRDLLVGIKRH-------KDGGRLKRKQVDSHESGI-----LSDLRADMDALRGDLRTVDGKLDNIMSLLLGMSTGDQG 233
            P+F+ +T  M+D+    +  WS  G++F+VK   VFE Q +P FF H KF SFVRQLNFYGFR++K     R+ P                E+E+ ++  F H  FRRGR DLL+ IKRH        +G  +K   V S  +GI     +S +++++  L+  +  +   +DN+ +L+  M+ G  G
Sbjct:   62 PMFLRKTYHMVDTCDPAVASWSEDGETFVVKNTDVFEKQIIPQFFKHSKFSSFVRQLNFYGFRKIKYHDTIRIDPK--------------LEAETANFWRFHHESFRRGRPDLLIEIKRHGGKESSASNGPLVKGNDV-STTAGIEKKENVSGVKSEVTVLKERIAVMSKNIDNLSNLVQNMALGQSG 234

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BLAST of mRNA_C-linearis_contig8.15506.1 vs. uniprot
Match: A0A7S4ISX4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4ISX4_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.430e-20
Identity = 64/182 (35.16%), Postives = 96/182 (52.75%), Query Frame = 0

Query:   65 TLRMIDSVSDDIVCWSRAGDSFIVKKVLVFE-QHLPSFFNHKKFLSFVRQLNFYGFRRVKGKSASRLSPADGAMHGAVAAMAAAKESESESWEEFIHPLFRRGRRDLLVGIKRH-------KDGGRLKRKQVDSHESGI-----LSDLRADMDALRGDLRTVDGKLDNIMSLLLGMSTGDQG 233
            T  M+D+    +  WS  G++F+VK   VFE Q +P FF H KF SFVRQLNFYGFR++K     R+ P                E+E+ ++  F H  FRRGR DLL+ IKRH        +G  +K   V S  +GI     +S +++++  L+  +  +   +DN+ +L+  M+ G  G
Sbjct:   29 TYHMVDTCDPAVASWSEDGETFVVKNTDVFEKQIIPQFFKHSKFSSFVRQLNFYGFRKIKYHDTIRIDPK--------------LEAETANFWRFHHESFRRGRPDLLIEIKRHGGKESSASNGPLVKGNDV-STTAGIEKKENVSGVKSEVTVLKERIAVMSKNIDNLSNLVQNMALGQSG 195

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BLAST of mRNA_C-linearis_contig8.15506.1 vs. uniprot
Match: G4YX78_PHYSP (HSF_DOMAIN domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YX78_PHYSP)

HSP 1 Score: 101 bits (251), Expect = 9.760e-20
Identity = 61/170 (35.88%), Postives = 95/170 (55.88%), Query Frame = 0

Query:   60 VFMERTLRMIDSVSDDIVCWSRAGDSFIVKKVLVFEQH-LPSFFNHKKFLSFVRQLNFYGFRRVKGKSASRLSPADGAMHGAVAAMAAAKESESESWEEFIHPLFRRGRRDLLVGIKRHKDGGRLKRKQVDSHESGI----LSDLRADMDALRGDLRTVDGKLDNIMSLL 224
            +F+E+T  +++    ++  W+  GDSF+VK    F +H +P++F H+KF SFVRQLN YGFR+V+  SA     A+ A   A AA  AA+++  + W EF H  F RGRRDLL  I+R           + +  + I      +LRA++  LR +++ +      + SLL
Sbjct:   65 LFLEKTYELLERCPPELASWTARGDSFVVKLPTAFAEHVIPTYFKHRKFSSFVRQLNLYGFRKVRATSA-----AEEAEGNAAAAAEAAEDASPKDWWEFRHDRFVRGRRDLLCEIRRRSPSDARVSTPLGAAGTPIERVEFEELRAEVGGLREEMQKMQRTNQQLASLL 229

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BLAST of mRNA_C-linearis_contig8.15506.1 vs. uniprot
Match: A0A7S2WDE9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDE9_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 2.340e-19
Identity = 60/166 (36.14%), Postives = 89/166 (53.61%), Query Frame = 0

Query:   59 PVFMERTLRMIDSVSDDIVCWSRAGDSFIVKKVLVFEQHLPSFFNHKKFLSFVRQLNFYGFRRVKGKSASRLSPADGAMHGAVAAMAAAKESESESWEEFIHPLFRRGRRDLLVGIKRHKDGGRLKRKQVDSHESGILSDLRADMDALRGDLRTVDGKLDNIMSLL 224
            PVF+++T +MIDS   ++  WS+AGD+FIVK +  F   LP FF HK F SFVRQLNFYGFR+++          DGA+                +W EF H  F RG+ +LL  IKR          QV+     ++ DL++++  LR  +  +   ++ + SL+
Sbjct:   58 PVFLQKTYQMIDSCPPEVAGWSKAGDTFIVKDMEAFANLLPRFFKHKNFRSFVRQLNFYGFRKLR---------TDGALIS----------DRPSNWWEFRHEKFLRGKPELLTHIKRANHYETAPADQVE-----LVEDLKSEVFQLRERIDDMSSTIEKLTSLV 199

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig8.15506.1 vs. uniprot

BLAST of mRNA_C-linearis_contig8.15506.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G9I4_ECTSI	1.440e-46	59.86	N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI...	[more]
A0A6H5LDD9_9PHAE	1.050e-43	59.87	HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc...	[more]
D7FV29_ECTSI	3.620e-41	58.78	Heat Shock transcription factor n=1 Tax=Ectocarpus...	[more]
D7G1S0_ECTSI	5.360e-36	36.59	HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc...	[more]
D7G1S2_ECTSI	4.310e-30	64.76	Heat Shock transcription factor n=1 Tax=Ectocarpus...	[more]
A0A8K1CMF4_PYTOL	8.920e-23	35.29	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A7S4IT22_9STRA	8.930e-23	35.11	Hypothetical protein (Fragment) n=1 Tax=Odontella ...	[more]
A0A7S4ISX4_9STRA	1.430e-20	35.16	Hypothetical protein (Fragment) n=1 Tax=Odontella ...	[more]
G4YX78_PHYSP	9.760e-20	35.88	HSF_DOMAIN domain-containing protein n=1 Tax=Phyto...	[more]
A0A7S2WDE9_9STRA	2.340e-19	36.14	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PRINTS	PR00056	HSFDOMAIN	coord: 110..122 score: 76.04 coord: 97..109 score: 42.64 coord: 60..83 score: 20.95
IPR000232	Heat shock factor (HSF)-type, DNA-binding	SMART	SM00415	hsfneu3	coord: 57..177 e-value: 1.4E-21 score: 87.7
IPR000232	Heat shock factor (HSF)-type, DNA-binding	PFAM	PF00447	HSF_DNA-bind	coord: 61..176 e-value: 2.3E-23 score: 82.6
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 54..178 e-value: 1.8E-26 score: 94.4
IPR027725	Heat shock transcription factor family	PANTHER	PTHR10015	HEAT SHOCK TRANSCRIPTION FACTOR	coord: 55..223
None	No IPR available	PANTHER	PTHR10015:SF306		coord: 55..223
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 57..176

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig8	contig	C-linearis_contig8:836646..847686 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig8.15506.1	mRNA_C-linearis_contig8.15506.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig8 831849..847760 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig8.15506.1 ID=prot_C-linearis_contig8.15506.1|Name=mRNA_C-linearis_contig8.15506.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=374bp
MLLHNGNEDKNQHGHSSGFLAAPGASAVAHSSSDDGLREMDEKTAPACEE
IEPFNINVPVFMERTLRMIDSVSDDIVCWSRAGDSFIVKKVLVFEQHLPS
FFNHKKFLSFVRQLNFYGFRRVKGKSASRLSPADGAMHGAVAAMAAAKES
ESESWEEFIHPLFRRGRRDLLVGIKRHKDGGRLKRKQVDSHESGILSDLR
ADMDALRGDLRTVDGKLDNIMSLLLGMSTGDQGQAGSTKPLPLSQNAADR
YAGAAGGGGESSFERGGGSGGSPAATSASTVLGRDREGLNQWRGGGGVGV
DGGIHPASQDPNALGSRLGHYVEPRLAMDQQHQQGSERHQLAHFSQQPSP
AQRTWPDPTRFGTRWREHGHYHH*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000232	HSF_DNA-bd
IPR036388	WH-like_DNA-bd_sf
IPR027725	HSF_fam
IPR036390	WH_DNA-bd_sf